RNA–Protein interactions for RNA: ENST00000575009.5

SRRM2-222, Transcript of serine/arginine repetitive matrix 2, human

TSL 5

Gene SRRM2, Length 1,146 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-222	ENST00000575009	NSUN7	Q8NE18	718 aa	Known RBP	29.78	■■■□□ 2.36
SRRM2-222	ENST00000575009	WNT8B	Q93098	351 aa		29.78	■■■□□ 2.36
SRRM2-222	ENST00000575009	VWCE	Q96DN2	955 aa		29.78	■■■□□ 2.36
SRRM2-222	ENST00000575009	SDF4	Q9BRK5	362 aa		29.78	■■■□□ 2.36
SRRM2-222	ENST00000575009	NFASC	O94856	1347 aa		29.77	■■■□□ 2.36
SRRM2-222	ENST00000575009		M0R2N6	131 aa		29.77	■■■□□ 2.36
SRRM2-222	ENST00000575009	SLC34A2	O95436	690 aa		29.77	■■■□□ 2.36
SRRM2-222	ENST00000575009	RBM25	P49756	843 aa	Known RBP	29.77	■■■□□ 2.36
SRRM2-222	ENST00000575009	ZNF365	Q70YC5	407 aa		29.77	■■■□□ 2.36
SRRM2-222	ENST00000575009	PHF20	Q9BVI0	1012 aa		29.77	■■■□□ 2.36
SRRM2-222	ENST00000575009	SZT2	Q5T011	3432 aa		29.76	■■■□□ 2.36
SRRM2-222	ENST00000575009	PRR16	Q569H4	304 aa		29.76	■■■□□ 2.35
SRRM2-222	ENST00000575009	TBCK	Q8TEA7	893 aa		29.76	■■■□□ 2.35
SRRM2-222	ENST00000575009	PCYT2	Q99447	389 aa		29.76	■■■□□ 2.35
SRRM2-222	ENST00000575009	RNPEP	Q9H4A4	650 aa		29.76	■■■□□ 2.35
SRRM2-222	ENST00000575009	ZNF215	Q9UL58	517 aa	Predicted RBP	29.76	■■■□□ 2.35
SRRM2-222	ENST00000575009	C17orf102	A2RUQ5	167 aa		29.75	■■■□□ 2.35
SRRM2-222	ENST00000575009	CCNE2	O96020	404 aa		29.75	■■■□□ 2.35
SRRM2-222	ENST00000575009	MARK3	P27448	753 aa		29.75	■■■□□ 2.35
SRRM2-222	ENST00000575009	ACTR2	P61160	394 aa		29.75	■■■□□ 2.35
SRRM2-222	ENST00000575009	BFSP2	Q13515	415 aa		29.75	■■■□□ 2.35
SRRM2-222	ENST00000575009	LENG9	Q96B70	501 aa		29.75	■■■□□ 2.35
SRRM2-222	ENST00000575009	SETD4	Q9NVD3	440 aa		29.75	■■■□□ 2.35
SRRM2-222	ENST00000575009	KAT6A	Q92794	2004 aa		29.74	■■■□□ 2.35
SRRM2-222	ENST00000575009	PITPNM1	O00562	1244 aa		29.74	■■■□□ 2.35
SRRM2-222	ENST00000575009	DHX15	O43143	795 aa	Known RBP	29.74	■■■□□ 2.35
SRRM2-222	ENST00000575009	IQCF3	P0C7M6	154 aa		29.74	■■■□□ 2.35
SRRM2-222	ENST00000575009	HOXC8	P31273	242 aa		29.74	■■■□□ 2.35
SRRM2-222	ENST00000575009	CIITA	P33076	1130 aa		29.74	■■■□□ 2.35
SRRM2-222	ENST00000575009	FOSB	P53539	338 aa		29.74	■■■□□ 2.35
SRRM2-222	ENST00000575009	DEFB128	Q7Z7B8	93 aa		29.74	■■■□□ 2.35
SRRM2-222	ENST00000575009	RETREG2	Q8NC44	543 aa		29.74	■■■□□ 2.35
SRRM2-222	ENST00000575009	OXER1	Q8TDS5	423 aa		29.74	■■■□□ 2.35
SRRM2-222	ENST00000575009	LIMCH1	Q9UPQ0	1083 aa		29.74	■■■□□ 2.35
SRRM2-222	ENST00000575009	IPO5	O00410	1097 aa	Known RBP	29.73	■■■□□ 2.35
SRRM2-222	ENST00000575009	PTK7	Q13308	1070 aa		29.73	■■■□□ 2.35
SRRM2-222	ENST00000575009	TRIM71	Q2Q1W2	868 aa	Known RBP	29.73	■■■□□ 2.35
SRRM2-222	ENST00000575009	GALNT17	Q6IS24	598 aa		29.73	■■■□□ 2.35
SRRM2-222	ENST00000575009	PSRC1	Q6PGN9	363 aa	Predicted RBP	29.73	■■■□□ 2.35
SRRM2-222	ENST00000575009	FAM177A1	Q8N128	213 aa	Predicted RBP	29.73	■■■□□ 2.35
SRRM2-222	ENST00000575009	TET1	Q8NFU7	2136 aa		29.73	■■■□□ 2.35
SRRM2-222	ENST00000575009	CAGE1	Q8TC20	777 aa		29.73	■■■□□ 2.35
SRRM2-222	ENST00000575009	GLG1	Q92896	1179 aa		29.73	■■■□□ 2.35
SRRM2-222	ENST00000575009	ATP6V0A1	Q93050	837 aa		29.73	■■■□□ 2.35
SRRM2-222	ENST00000575009	ZNF577	Q9BSK1	485 aa		29.73	■■■□□ 2.35
SRRM2-222	ENST00000575009	TREH	O43280	583 aa		29.72	■■■□□ 2.35
SRRM2-222	ENST00000575009	SET	Q01105	290 aa	Predicted RBP	29.72	■■■□□ 2.35
SRRM2-222	ENST00000575009	CCDC83	Q8IWF9	413 aa		29.72	■■■□□ 2.35
SRRM2-222	ENST00000575009	CCDC155	Q8N6L0	562 aa		29.72	■■■□□ 2.35
SRRM2-222	ENST00000575009	EMSY	Q7Z589	1322 aa		29.71	■■■□□ 2.35
SRRM2-222	ENST00000575009	LGR5	O75473	907 aa		29.71	■■■□□ 2.35
SRRM2-222	ENST00000575009	TDP2	O95551	362 aa		29.71	■■■□□ 2.35
SRRM2-222	ENST00000575009	CKB	P12277	381 aa		29.71	■■■□□ 2.35
SRRM2-222	ENST00000575009	FAM109B	Q6ICB4	259 aa	Predicted RBP	29.71	■■■□□ 2.35
SRRM2-222	ENST00000575009	OTOP2	Q7RTS6	562 aa		29.71	■■■□□ 2.35
SRRM2-222	ENST00000575009	SERINC5	Q86VE9	423 aa		29.71	■■■□□ 2.35
SRRM2-222	ENST00000575009	LMBR1	Q8WVP7	490 aa		29.71	■■■□□ 2.35
SRRM2-222	ENST00000575009	SMARCAD1	Q9H4L7	1026 aa		29.71	■■■□□ 2.35
SRRM2-222	ENST00000575009	CXXC1	Q9P0U4	656 aa	Predicted RBP	29.71	■■■□□ 2.35
SRRM2-222	ENST00000575009	LAMA2	P24043	3122 aa	Known RBP	29.7	■■■□□ 2.35
SRRM2-222	ENST00000575009	FGB	P02675	491 aa		29.7	■■■□□ 2.35
SRRM2-222	ENST00000575009	XBP1	P17861	261 aa		29.7	■■■□□ 2.35
SRRM2-222	ENST00000575009	USP11	P51784	963 aa		29.7	■■■□□ 2.35
SRRM2-222	ENST00000575009	INF2	Q27J81	1249 aa		29.7	■■■□□ 2.35
SRRM2-222	ENST00000575009	RASIP1	Q5U651	963 aa		29.7	■■■□□ 2.35
SRRM2-222	ENST00000575009		Q7L0L9	218 aa		29.7	■■■□□ 2.35
SRRM2-222	ENST00000575009	AFAP1L1	Q8TED9	768 aa		29.7	■■■□□ 2.35
SRRM2-222	ENST00000575009	WASF1	Q92558	559 aa		29.7	■■■□□ 2.35
SRRM2-222	ENST00000575009	GJA10	Q969M2	543 aa		29.7	■■■□□ 2.35
SRRM2-222	ENST00000575009	ERAP1	Q9NZ08	941 aa		29.7	■■■□□ 2.35
SRRM2-222	ENST00000575009	SELP	P16109	830 aa		29.69	■■■□□ 2.34
SRRM2-222	ENST00000575009	RBL2	Q08999	1139 aa		29.69	■■■□□ 2.34
SRRM2-222	ENST00000575009	GPNMB	Q14956	572 aa		29.69	■■■□□ 2.34
SRRM2-222	ENST00000575009	NONO	Q15233	471 aa	Known RBP eCLIP	29.69	■■■□□ 2.34	2e-6	■■■□□ 18.7
SRRM2-222	ENST00000575009	LRRC8D	Q7L1W4	858 aa		29.69	■■■□□ 2.34
SRRM2-222	ENST00000575009	KRT25	Q7Z3Z0	450 aa		29.69	■■■□□ 2.34
SRRM2-222	ENST00000575009	RPUSD2	Q8IZ73	545 aa	Known RBP	29.69	■■■□□ 2.34
SRRM2-222	ENST00000575009	MSH4	O15457	936 aa		29.68	■■■□□ 2.34
SRRM2-222	ENST00000575009	ATG7	O95352	703 aa		29.68	■■■□□ 2.34
SRRM2-222	ENST00000575009	ADAM17	P78536	824 aa		29.68	■■■□□ 2.34
SRRM2-222	ENST00000575009	EARS2	Q5JPH6	523 aa	Known RBP	29.68	■■■□□ 2.34
SRRM2-222	ENST00000575009	ZNF618	Q5T7W0	954 aa		29.68	■■■□□ 2.34
SRRM2-222	ENST00000575009	TRAF7	Q6Q0C0	670 aa		29.68	■■■□□ 2.34
SRRM2-222	ENST00000575009	HERVK_113	Q902F9	699 aa		29.68	■■■□□ 2.34
SRRM2-222	ENST00000575009	AZI2	Q9H6S1	392 aa		29.68	■■■□□ 2.34
SRRM2-222	ENST00000575009	GTF3C3	Q9Y5Q9	886 aa		29.68	■■■□□ 2.34
SRRM2-222	ENST00000575009	WDR81	Q562E7	1941 aa		29.68	■■■□□ 2.34
SRRM2-222	ENST00000575009	FAM205C	A6NFA0	338 aa		29.67	■■■□□ 2.34
SRRM2-222	ENST00000575009	PPFIA1	Q13136	1202 aa		29.67	■■■□□ 2.34
SRRM2-222	ENST00000575009	RABEP1	Q15276	862 aa		29.67	■■■□□ 2.34
SRRM2-222	ENST00000575009	ABHD15	Q6UXT9	468 aa		29.67	■■■□□ 2.34
SRRM2-222	ENST00000575009	UPF2	Q9HAU5	1272 aa	Known RBP	29.67	■■■□□ 2.34
SRRM2-222	ENST00000575009	GBF1	Q92538	1859 aa		29.67	■■■□□ 2.34
SRRM2-222	ENST00000575009	CCDC194	A0A1B0GVG4	234 aa		29.66	■■■□□ 2.34
SRRM2-222	ENST00000575009	GRXCR1	A8MXD5	290 aa		29.66	■■■□□ 2.34
SRRM2-222	ENST00000575009	RFC2	P35250	354 aa		29.66	■■■□□ 2.34
SRRM2-222	ENST00000575009	THPO	P40225	353 aa		29.66	■■■□□ 2.34
SRRM2-222	ENST00000575009	STAT5B	P51692	787 aa		29.66	■■■□□ 2.34
SRRM2-222	ENST00000575009	NR5A1	Q13285	461 aa		29.66	■■■□□ 2.34
SRRM2-222	ENST00000575009	GRIK4	Q16099	956 aa		29.66	■■■□□ 2.34

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms