RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 V9GY48 417 aaPredicted RBP12.09□□□□□ -0.47
LITAF-216ENST00000574848 EYSQ5T1H1 3165 aa12.09□□□□□ -0.47
LITAF-216ENST00000574848 CHD7Q9P2D1 2997 aa12.09□□□□□ -0.47
LITAF-216ENST00000574848 GRXCR1A8MXD5 290 aa12.08□□□□□ -0.48
LITAF-216ENST00000574848 SORBS3O60504 671 aa12.08□□□□□ -0.48
LITAF-216ENST00000574848 CAND2O75155 1236 aa12.08□□□□□ -0.48
LITAF-216ENST00000574848 MCM4P33991 863 aa12.08□□□□□ -0.48
LITAF-216ENST00000574848 SREBF1P36956 1147 aa12.08□□□□□ -0.48
LITAF-216ENST00000574848 CHMP4BP1P59074 171 aa12.08□□□□□ -0.48
LITAF-216ENST00000574848 ADAM17P78536 824 aa12.08□□□□□ -0.48
LITAF-216ENST00000574848 MTMR1Q13613 665 aa12.08□□□□□ -0.48
LITAF-216ENST00000574848 DEFB128Q7Z7B8 93 aa12.08□□□□□ -0.48
LITAF-216ENST00000574848 CRYGNQ8WXF5 182 aa12.08□□□□□ -0.48
LITAF-216ENST00000574848 WNT8BQ93098 351 aa12.08□□□□□ -0.48
LITAF-216ENST00000574848 SLC9A7Q96T83 725 aa12.08□□□□□ -0.48
LITAF-216ENST00000574848 ANO3Q9BYT9 981 aa12.08□□□□□ -0.48
LITAF-216ENST00000574848 ZNF576Q9H609 170 aa12.08□□□□□ -0.48
LITAF-216ENST00000574848 ZNF215Q9UL58 517 aaPredicted RBP12.08□□□□□ -0.48
LITAF-216ENST00000574848 PCDHA11Q9Y5I1 949 aa12.08□□□□□ -0.48
LITAF-216ENST00000574848 EMSYQ7Z589 1322 aa12.08□□□□□ -0.48
LITAF-216ENST00000574848 C17orf102A2RUQ5 167 aa12.07□□□□□ -0.48
LITAF-216ENST00000574848 ATP9AO75110 1047 aa12.07□□□□□ -0.48
LITAF-216ENST00000574848 SMIM10L2AP0DMW4 78 aa12.07□□□□□ -0.48
LITAF-216ENST00000574848 SMIM10L2BP0DMW5 78 aa12.07□□□□□ -0.48
LITAF-216ENST00000574848 SCG2P13521 617 aa12.07□□□□□ -0.48
LITAF-216ENST00000574848 ATP2A2P16615 1042 aaKnown RBP12.07□□□□□ -0.48
LITAF-216ENST00000574848 ADD1P35611 737 aaKnown RBP12.07□□□□□ -0.48
LITAF-216ENST00000574848 FGD1P98174 961 aa12.07□□□□□ -0.48
LITAF-216ENST00000574848 GRIN2CQ14957 1233 aa12.07□□□□□ -0.48
LITAF-216ENST00000574848 NTRK3Q16288 839 aa12.07□□□□□ -0.48
LITAF-216ENST00000574848 CLEC17AQ6ZS10 378 aa12.07□□□□□ -0.48
LITAF-216ENST00000574848 TRIM50Q86XT4 487 aa12.07□□□□□ -0.48
LITAF-216ENST00000574848 PHOSPHO2Q8TCD6 241 aa12.07□□□□□ -0.48
LITAF-216ENST00000574848 MYLIPQ8WY64 445 aa12.07□□□□□ -0.48
LITAF-216ENST00000574848 TNPO1Q92973 898 aaKnown RBP12.07□□□□□ -0.48
LITAF-216ENST00000574848 MXRA8Q9BRK3 442 aa12.07□□□□□ -0.48
LITAF-216ENST00000574848 RNF26Q9BY78 433 aaPredicted RBP12.07□□□□□ -0.48
LITAF-216ENST00000574848 ZMYND12Q9H0C1 365 aa12.07□□□□□ -0.48
LITAF-216ENST00000574848 MSRAQ9UJ68 235 aa12.07□□□□□ -0.48
LITAF-216ENST00000574848 YBX2Q9Y2T7 364 aaKnown RBP12.07□□□□□ -0.48
LITAF-216ENST00000574848 TELO2Q9Y4R8 837 aa12.07□□□□□ -0.48
LITAF-216ENST00000574848 NFASCO94856 1347 aa12.07□□□□□ -0.48
LITAF-216ENST00000574848 SIP14410 1827 aa12.07□□□□□ -0.48
LITAF-216ENST00000574848 SMCO2A6NFE2 343 aa12.06□□□□□ -0.48
LITAF-216ENST00000574848 ZBBXA8MT70 800 aa12.06□□□□□ -0.48
LITAF-216ENST00000574848 PRPF3O43395 683 aaKnown RBP12.06□□□□□ -0.48
LITAF-216ENST00000574848 NBNO60934 754 aa12.06□□□□□ -0.48
LITAF-216ENST00000574848 IFNAR1P17181 557 aa12.06□□□□□ -0.48
LITAF-216ENST00000574848 TCF7P36402 384 aaPredicted RBP12.06□□□□□ -0.48
LITAF-216ENST00000574848 ZNF200P98182 395 aaPredicted RBP12.06□□□□□ -0.48
LITAF-216ENST00000574848 MKRN4PQ13434 485 aaPredicted RBP12.06□□□□□ -0.48
LITAF-216ENST00000574848 TOB2Q14106 344 aaPredicted RBP12.06□□□□□ -0.48
LITAF-216ENST00000574848 MBTPS1Q14703 1052 aa12.06□□□□□ -0.48
LITAF-216ENST00000574848 PKN1Q16512 942 aa12.06□□□□□ -0.48
LITAF-216ENST00000574848 SKOR2Q2VWA4 1001 aaPredicted RBP12.06□□□□□ -0.48
LITAF-216ENST00000574848 MCTP2Q6DN12 878 aa12.06□□□□□ -0.48
LITAF-216ENST00000574848 CNKSR3Q6P9H4 555 aa12.06□□□□□ -0.48
LITAF-216ENST00000574848 NIPA1Q7RTP0 329 aa12.06□□□□□ -0.48
LITAF-216ENST00000574848 CCDC12Q8WUD4 166 aaPredicted RBP12.06□□□□□ -0.48
LITAF-216ENST00000574848 RNPEPQ9H4A4 650 aa12.06□□□□□ -0.48
LITAF-216ENST00000574848 MICAL3Q7RTP6 2002 aa12.06□□□□□ -0.48
LITAF-216ENST00000574848 COL4A6Q14031 1691 aa12.06□□□□□ -0.48
LITAF-216ENST00000574848 UNC80Q8N2C7 3258 aa12.06□□□□□ -0.48
LITAF-216ENST00000574848 GSTTP1A0A1W2PQM5 241 aa12.05□□□□□ -0.48
LITAF-216ENST00000574848 EFCAB14O75071 495 aa12.05□□□□□ -0.48
LITAF-216ENST00000574848 LGR5O75473 907 aa12.05□□□□□ -0.48
LITAF-216ENST00000574848 GNAT1P11488 350 aa12.05□□□□□ -0.48
LITAF-216ENST00000574848 FOSL2P15408 326 aa12.05□□□□□ -0.48
LITAF-216ENST00000574848 PDIA3P30101 505 aaKnown RBP12.05□□□□□ -0.48
LITAF-216ENST00000574848 CEP55Q53EZ4 464 aa12.05□□□□□ -0.48
LITAF-216ENST00000574848 ZNF618Q5T7W0 954 aa12.05□□□□□ -0.48
LITAF-216ENST00000574848 RPAINQ86UA6 219 aa12.05□□□□□ -0.48
LITAF-216ENST00000574848 MAFAQ8NHW3 353 aaPredicted RBP12.05□□□□□ -0.48
LITAF-216ENST00000574848 LMBR1Q8WVP7 490 aa12.05□□□□□ -0.48
LITAF-216ENST00000574848 SEPT1Q8WYJ6 367 aa12.05□□□□□ -0.48
LITAF-216ENST00000574848 ATP6V0A1Q93050 837 aa12.05□□□□□ -0.48
LITAF-216ENST00000574848 NKX2-4Q9H2Z4 354 aa12.05□□□□□ -0.48
LITAF-216ENST00000574848 JPH1Q9HDC5 661 aaPredicted RBP12.05□□□□□ -0.48
LITAF-216ENST00000574848 KCNH7Q9NS40 1196 aa12.05□□□□□ -0.48
LITAF-216ENST00000574848 SMC3Q9UQE7 1217 aa12.05□□□□□ -0.48
LITAF-216ENST00000574848 NRCAMQ92823 1304 aa12.05□□□□□ -0.48
LITAF-216ENST00000574848 ABHD14A-ACY1A0A1B0GW23 586 aa12.04□□□□□ -0.48
LITAF-216ENST00000574848 MEIS1O00470 390 aa12.04□□□□□ -0.48
LITAF-216ENST00000574848 TREHO43280 583 aa12.04□□□□□ -0.48
LITAF-216ENST00000574848 CYP3A4P08684 503 aa12.04□□□□□ -0.48
LITAF-216ENST00000574848 WDR5P61964 334 aaKnown RBP12.04□□□□□ -0.48
LITAF-216ENST00000574848 ARHGAP4P98171 946 aa12.04□□□□□ -0.48
LITAF-216ENST00000574848 HERC6Q8IVU3 1022 aa12.04□□□□□ -0.48
LITAF-216ENST00000574848 REXO1Q8N1G1 1221 aaKnown RBP12.04□□□□□ -0.48
LITAF-216ENST00000574848 SLC17A8Q8NDX2 589 aa12.04□□□□□ -0.48
LITAF-216ENST00000574848 CCDC148Q8NFR7 591 aa12.04□□□□□ -0.48
LITAF-216ENST00000574848 PGBD1Q96JS3 809 aa12.04□□□□□ -0.48
LITAF-216ENST00000574848 FTOQ9C0B1 505 aaKnown RBP eCLIP12.04□□□□□ -0.48
LITAF-216ENST00000574848 SLC28A3Q9HAS3 691 aa12.04□□□□□ -0.48
LITAF-216ENST00000574848 AGO4Q9HCK5 861 aaKnown RBP12.04□□□□□ -0.48
LITAF-216ENST00000574848 TMEM260Q9NX78 707 aa12.04□□□□□ -0.48
LITAF-216ENST00000574848 ERAP1Q9NZ08 941 aa12.04□□□□□ -0.48
LITAF-216ENST00000574848 NAP1L2Q9ULW6 460 aaPredicted RBP12.04□□□□□ -0.48
LITAF-216ENST00000574848 TRANK1O15050 2925 aa12.04□□□□□ -0.48
LITAF-216ENST00000574848 PRUNE2Q8WUY3 3088 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms