RNA–Protein interactions for RNA: ENST00000574085.5

TRPV1-208, Transcript of transient receptor potential cation channel subfamily V member 1, human

TSL 2

Gene TRPV1, Length 2,644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRPV1-208	ENST00000574085	L3MBTL1	Q9Y468	752 aa		13.92	□□□□□ -0.18
TRPV1-208	ENST00000574085	ARAP2	Q8WZ64	1704 aa		13.92	□□□□□ -0.18
TRPV1-208	ENST00000574085	ANP32D	O95626	131 aa		13.92	□□□□□ -0.18
TRPV1-208	ENST00000574085	NEFH	P12036	1026 aa		13.92	□□□□□ -0.18
TRPV1-208	ENST00000574085	SNX1	Q13596	522 aa		13.92	□□□□□ -0.18
TRPV1-208	ENST00000574085	ENOX2	Q16206	610 aa	Known RBP	13.92	□□□□□ -0.18
TRPV1-208	ENST00000574085	TBC1D1	Q86TI0	1168 aa	Predicted RBP	13.92	□□□□□ -0.18
TRPV1-208	ENST00000574085	LMBR1	Q8WVP7	490 aa		13.92	□□□□□ -0.18
TRPV1-208	ENST00000574085	ZBTB10	Q96DT7	871 aa		13.92	□□□□□ -0.18
TRPV1-208	ENST00000574085	FAM129A	Q9BZQ8	928 aa		13.92	□□□□□ -0.18
TRPV1-208	ENST00000574085	DDX47	Q9H0S4	455 aa	Known RBP	13.92	□□□□□ -0.18
TRPV1-208	ENST00000574085	BATF3	Q9NR55	127 aa		13.92	□□□□□ -0.18
TRPV1-208	ENST00000574085	SART1	O43290	800 aa	Known RBP	13.91	□□□□□ -0.18
TRPV1-208	ENST00000574085	DAPK3	O43293	454 aa		13.91	□□□□□ -0.18
TRPV1-208	ENST00000574085	ARID5A	Q03989	594 aa		13.91	□□□□□ -0.18
TRPV1-208	ENST00000574085	KCNMA1	Q12791	1236 aa		13.91	□□□□□ -0.18
TRPV1-208	ENST00000574085	ERMARD	Q5T6L9	678 aa		13.91	□□□□□ -0.18
TRPV1-208	ENST00000574085	CHADL	Q6NUI6	762 aa		13.91	□□□□□ -0.18
TRPV1-208	ENST00000574085	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.91	□□□□□ -0.18
TRPV1-208	ENST00000574085	RPUSD2	Q8IZ73	545 aa	Known RBP	13.91	□□□□□ -0.18
TRPV1-208	ENST00000574085	ANKS4B	Q8N8V4	417 aa		13.91	□□□□□ -0.18
TRPV1-208	ENST00000574085	SCFD2	Q8WU76	684 aa		13.91	□□□□□ -0.18
TRPV1-208	ENST00000574085	GOLPH3	Q9H4A6	298 aa		13.91	□□□□□ -0.18
TRPV1-208	ENST00000574085	CNOT10	Q9H9A5	744 aa	Known RBP	13.91	□□□□□ -0.18
TRPV1-208	ENST00000574085	TRMT112	Q9UI30	125 aa	Known RBP	13.91	□□□□□ -0.18
TRPV1-208	ENST00000574085	SLC12A4	Q9UP95	1085 aa		13.91	□□□□□ -0.18
TRPV1-208	ENST00000574085		A0A0G2JS52	829 aa		13.91	□□□□□ -0.18
TRPV1-208	ENST00000574085	FAM163B	P0C2L3	166 aa		13.91	□□□□□ -0.18
TRPV1-208	ENST00000574085	PEX19	P40855	299 aa		13.91	□□□□□ -0.18
TRPV1-208	ENST00000574085	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.91	□□□□□ -0.18
TRPV1-208	ENST00000574085	BZW1	Q7L1Q6	419 aa	Known RBP	13.91	□□□□□ -0.18
TRPV1-208	ENST00000574085	TMC3	Q7Z5M5	1100 aa		13.91	□□□□□ -0.18
TRPV1-208	ENST00000574085	EDEM3	Q9BZQ6	932 aa		13.91	□□□□□ -0.18
TRPV1-208	ENST00000574085	TRPC6	Q9Y210	931 aa		13.91	□□□□□ -0.18
TRPV1-208	ENST00000574085		A0A087X0T9	212 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	ERVV-2	B6SEH9	535 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085		F8VZ95	297 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	FGFR1OP	O95684	399 aa	Known RBP	13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	GSTA1	P08263	222 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	FAM228B	P0C875	321 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	RAB27A	P51159	221 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	DHX9	Q08211	1270 aa	Known RBP	13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	SLC18A3	Q16572	532 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	FAM133B	Q5BKY9	247 aa	Known RBP	13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	FAM47A	Q5JRC9	791 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	FAM83B	Q5T0W9	1011 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	CEP72	Q9P209	647 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	ABCF2	Q9UG63	623 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	PNMA2	Q9UL42	364 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	PCDHA6	Q9UN73	950 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	ATP6V0A2	Q9Y487	856 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	PCDHA8	Q9Y5H6	950 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	ABCB11	O95342	1321 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	DLEC1	Q9Y238	1755 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	PDE8A	O60658	829 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	KIF4A	O95239	1232 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	POLR2F	P61218	127 aa	Known RBP	13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	DYNLL1	P63167	89 aa	Known RBP	13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	AMPD3	Q01432	767 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	EVX2	Q03828	476 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	COBLL1	Q53SF7	1204 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	ANKS1A	Q92625	1134 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	SPAG5	Q96R06	1193 aa		13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	LSM14B	Q9BX40	385 aa	Known RBP	13.9	□□□□□ -0.18
TRPV1-208	ENST00000574085	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	MYH7B	A7E2Y1	1941 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	MYH1	P12882	1939 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	CES2	O00748	559 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	PPFIA2	O75334	1257 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	CDC25C	P30307	473 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	PRPH	P41219	470 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	RIPK1	Q13546	671 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	RAPGEF1	Q13905	1077 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	AGAP11	Q8TF27	550 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	TLCD1	Q96CP7	247 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	SELENOS	Q9BQE4	189 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	ADAMTS1	Q9UHI8	967 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	AMACR	Q9UHK6	382 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	NOC2L	Q9Y3T9	749 aa	Known RBP	13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	MYH3	P11055	1940 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085		M0R2N6	131 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	PGRMC1	O00264	195 aa	Known RBP	13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	NOL4	O94818	638 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	MME	P08473	750 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	CHN1	P15882	459 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	LRRC55	Q6ZSA7	311 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	CCHCR1	Q8TD31	782 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	ACTRT1	Q8TDG2	376 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	CENPT	Q96BT3	561 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	PBK	Q96KB5	322 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	DPH5	Q9H2P9	285 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	PCDH11X	Q9BZA7	1347 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	PCDH11Y	Q9BZA8	1340 aa		13.89	□□□□□ -0.19
TRPV1-208	ENST00000574085	LAD1	O00515	517 aa		13.88	□□□□□ -0.19
TRPV1-208	ENST00000574085	KRIT1	O00522	736 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms