RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 RSPH3Q86UC2 560 aa14□□□□□ -0.17
CCDC40-210ENST00000573903 LMBR1Q8WVP7 490 aa14□□□□□ -0.17
CCDC40-210ENST00000573903 C17orf80Q9BSJ5 609 aa14□□□□□ -0.17
CCDC40-210ENST00000573903 IFIH1Q9BYX4 1025 aaKnown RBP14□□□□□ -0.17
CCDC40-210ENST00000573903 UBE2ZQ9H832 354 aaPredicted RBP14□□□□□ -0.17
CCDC40-210ENST00000573903 PSTPIP2Q9H939 334 aa14□□□□□ -0.17
CCDC40-210ENST00000573903 SLC12A7Q9Y666 1083 aa14□□□□□ -0.17
CCDC40-210ENST00000573903 RALGAPA2Q2PPJ7 1873 aa13.99□□□□□ -0.17
CCDC40-210ENST00000573903 COL4A6Q14031 1691 aa13.99□□□□□ -0.17
CCDC40-210ENST00000573903 SH2B2O14492 632 aaPredicted RBP13.99□□□□□ -0.17
CCDC40-210ENST00000573903 PLEKHA8P1O95397 391 aa13.99□□□□□ -0.17
CCDC40-210ENST00000573903 TIGD5Q53EQ6 642 aa13.99□□□□□ -0.17
CCDC40-210ENST00000573903 TAF2Q6P1X5 1199 aa13.99□□□□□ -0.17
CCDC40-210ENST00000573903 SYNE3Q6ZMZ3 975 aa13.99□□□□□ -0.17
CCDC40-210ENST00000573903 SP7Q8TDD2 431 aaPredicted RBP13.99□□□□□ -0.17
CCDC40-210ENST00000573903 TOP1MTQ969P6 601 aa13.99□□□□□ -0.17
CCDC40-210ENST00000573903 ERAP1Q9NZ08 941 aa13.99□□□□□ -0.17
CCDC40-210ENST00000573903 REV3LO60673 3130 aa13.99□□□□□ -0.17
CCDC40-210ENST00000573903 RXRAP19793 462 aa13.98□□□□□ -0.17
CCDC40-210ENST00000573903 LIFRP42702 1097 aa13.98□□□□□ -0.17
CCDC40-210ENST00000573903 PPFIA1Q13136 1202 aa13.98□□□□□ -0.17
CCDC40-210ENST00000573903 MKRN4PQ13434 485 aaPredicted RBP13.98□□□□□ -0.17
CCDC40-210ENST00000573903 MTMR1Q13613 665 aa13.98□□□□□ -0.17
CCDC40-210ENST00000573903 EPC2Q52LR7 807 aa13.98□□□□□ -0.17
CCDC40-210ENST00000573903 FAM26DQ5JW98 314 aa13.98□□□□□ -0.17
CCDC40-210ENST00000573903 SRBD1Q8N5C6 995 aaKnown RBP13.98□□□□□ -0.17
CCDC40-210ENST00000573903 SEPT1Q8WYJ6 367 aa13.98□□□□□ -0.17
CCDC40-210ENST00000573903 GLG1Q92896 1179 aa13.98□□□□□ -0.17
CCDC40-210ENST00000573903 MRPL38Q96DV4 380 aaKnown RBP13.98□□□□□ -0.17
CCDC40-210ENST00000573903 XIRP2A4UGR9 3374 aa13.97□□□□□ -0.17
CCDC40-210ENST00000573903 SLC27A2O14975 620 aa13.97□□□□□ -0.17
CCDC40-210ENST00000573903 RPLP2P05387 115 aaKnown RBP13.97□□□□□ -0.17
CCDC40-210ENST00000573903 KCNA5P22460 613 aa13.97□□□□□ -0.17
CCDC40-210ENST00000573903 MARK3P27448 753 aa13.97□□□□□ -0.17
CCDC40-210ENST00000573903 ADAM17P78536 824 aa13.97□□□□□ -0.17
CCDC40-210ENST00000573903 GPM6BQ13491 265 aa13.97□□□□□ -0.17
CCDC40-210ENST00000573903 RNF20Q5VTR2 975 aa13.97□□□□□ -0.17
CCDC40-210ENST00000573903 HEATR3Q7Z4Q2 680 aa13.97□□□□□ -0.17
CCDC40-210ENST00000573903 MICU3Q86XE3 530 aa13.97□□□□□ -0.17
CCDC40-210ENST00000573903 CMTR1Q8N1G2 835 aaKnown RBP13.97□□□□□ -0.17
CCDC40-210ENST00000573903 TNPO1Q92973 898 aaKnown RBP13.97□□□□□ -0.17
CCDC40-210ENST00000573903 SMARCAD1Q9H4L7 1026 aa13.97□□□□□ -0.17
CCDC40-210ENST00000573903 ANO2Q9NQ90 1003 aa13.97□□□□□ -0.17
CCDC40-210ENST00000573903 PKD2L1Q9P0L9 805 aa13.97□□□□□ -0.17
CCDC40-210ENST00000573903 TUBE1Q9UJT0 475 aa13.97□□□□□ -0.17
CCDC40-210ENST00000573903 RWDD3Q9Y3V2 267 aa13.97□□□□□ -0.17
CCDC40-210ENST00000573903 NCOR1O75376 2440 aa13.96□□□□□ -0.17
CCDC40-210ENST00000573903 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.96□□□□□ -0.17
CCDC40-210ENST00000573903 H3BNC9 293 aa13.96□□□□□ -0.17
CCDC40-210ENST00000573903 MAFGO15525 162 aa13.96□□□□□ -0.17
CCDC40-210ENST00000573903 GHRP10912 638 aa13.96□□□□□ -0.17
CCDC40-210ENST00000573903 KCNA2P16389 499 aa13.96□□□□□ -0.17
CCDC40-210ENST00000573903 GRIK4Q16099 956 aa13.96□□□□□ -0.17
CCDC40-210ENST00000573903 UBE2SQ16763 222 aa13.96□□□□□ -0.17
CCDC40-210ENST00000573903 LEXMQ3ZCV2 418 aa13.96□□□□□ -0.17
CCDC40-210ENST00000573903 CREB3L3Q68CJ9 461 aa13.96□□□□□ -0.17
CCDC40-210ENST00000573903 RPAINQ86UA6 219 aa13.96□□□□□ -0.17
CCDC40-210ENST00000573903 RAB11FIP4Q86YS3 637 aa13.96□□□□□ -0.17
CCDC40-210ENST00000573903 TMEM192Q8IY95 271 aa13.96□□□□□ -0.17
CCDC40-210ENST00000573903 CCDC82Q8N4S0 544 aa13.96□□□□□ -0.17
CCDC40-210ENST00000573903 FIBCD1Q8N539 461 aa13.96□□□□□ -0.17
CCDC40-210ENST00000573903 IL17RAQ96F46 866 aa13.96□□□□□ -0.17
CCDC40-210ENST00000573903 ESYT1Q9BSJ8 1104 aa13.96□□□□□ -0.17
CCDC40-210ENST00000573903 LSG1Q9H089 658 aaKnown RBP13.96□□□□□ -0.17
CCDC40-210ENST00000573903 AZI2Q9H6S1 392 aa13.96□□□□□ -0.17
CCDC40-210ENST00000573903 PPP4R2Q9NY27 417 aa13.96□□□□□ -0.17
CCDC40-210ENST00000573903 PCDHA6Q9UN73 950 aa13.96□□□□□ -0.17
CCDC40-210ENST00000573903 HCN4Q9Y3Q4 1203 aa13.96□□□□□ -0.17
CCDC40-210ENST00000573903 PCDHA8Q9Y5H6 950 aa13.96□□□□□ -0.17
CCDC40-210ENST00000573903 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.95□□□□□ -0.18
CCDC40-210ENST00000573903 M0QZ92 97 aa13.95□□□□□ -0.18
CCDC40-210ENST00000573903 ATP9AO75110 1047 aa13.95□□□□□ -0.18
CCDC40-210ENST00000573903 ITGB5P18084 799 aa13.95□□□□□ -0.18
CCDC40-210ENST00000573903 CTNNB1P35222 781 aa13.95□□□□□ -0.18
CCDC40-210ENST00000573903 PUS10Q3MIT2 529 aaKnown RBP13.95□□□□□ -0.18
CCDC40-210ENST00000573903 BMP2KLQ5H9B9 411 aa13.95□□□□□ -0.18
CCDC40-210ENST00000573903 TMEM31Q5JXX7 168 aa13.95□□□□□ -0.18
CCDC40-210ENST00000573903 EP400NLQ6ZTU2 488 aa13.95□□□□□ -0.18
CCDC40-210ENST00000573903 TMTC3Q6ZXV5 915 aa13.95□□□□□ -0.18
CCDC40-210ENST00000573903 FANCBQ8NB91 859 aa13.95□□□□□ -0.18
CCDC40-210ENST00000573903 BANK1Q8NDB2 785 aa13.95□□□□□ -0.18
CCDC40-210ENST00000573903 FAM122AQ96E09 287 aa13.95□□□□□ -0.18
CCDC40-210ENST00000573903 SDF4Q9BRK5 362 aa13.95□□□□□ -0.18
CCDC40-210ENST00000573903 NSUN3Q9H649 340 aaKnown RBP13.95□□□□□ -0.18
CCDC40-210ENST00000573903 JPH1Q9HDC5 661 aaPredicted RBP13.95□□□□□ -0.18
CCDC40-210ENST00000573903 JADE2Q9NQC1 790 aa13.95□□□□□ -0.18
CCDC40-210ENST00000573903 RBM28Q9NW13 759 aaKnown RBP13.95□□□□□ -0.18
CCDC40-210ENST00000573903 RAPGEFL1Q9UHV5 662 aa13.95□□□□□ -0.18
CCDC40-210ENST00000573903 FAM50BQ9Y247 325 aa13.95□□□□□ -0.18
CCDC40-210ENST00000573903 TELO2Q9Y4R8 837 aa13.95□□□□□ -0.18
CCDC40-210ENST00000573903 UBIAD1Q9Y5Z9 338 aa13.95□□□□□ -0.18
CCDC40-210ENST00000573903 ADGRA3Q8IWK6 1321 aa13.94□□□□□ -0.18
CCDC40-210ENST00000573903 GSTTP1A0A1W2PQM5 241 aa13.94□□□□□ -0.18
CCDC40-210ENST00000573903 hCG_1642624A0A1W2PR95 340 aa13.94□□□□□ -0.18
CCDC40-210ENST00000573903 RRN3P2A6NIE6 340 aa13.94□□□□□ -0.18
CCDC40-210ENST00000573903 CHRNA1P02708 482 aa13.94□□□□□ -0.18
CCDC40-210ENST00000573903 SSTR3P32745 418 aaPredicted RBP13.94□□□□□ -0.18
CCDC40-210ENST00000573903 NAPAP54920 295 aa13.94□□□□□ -0.18
CCDC40-210ENST00000573903 IGBP1P78318 339 aa13.94□□□□□ -0.18
CCDC40-210ENST00000573903 PTCRAQ6ISU1 281 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms