RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 WNT8BQ93098 351 aa31.58■■■□□ 2.65
SCARF1-207ENST00000573867 PCYT2Q99447 389 aa31.58■■■□□ 2.65
SCARF1-207ENST00000573867 BUD13Q9BRD0 619 aaKnown RBP eCLIP31.58■■■□□ 2.652e-6■■□□□ 13.2
SCARF1-207ENST00000573867 SLC9A2Q9UBY0 812 aa31.58■■■□□ 2.65
SCARF1-207ENST00000573867 RBAK-RBAKDNI3L0D1 243 aa31.57■■■□□ 2.64
SCARF1-207ENST00000573867 DHX15O43143 795 aaKnown RBP31.57■■■□□ 2.64
SCARF1-207ENST00000573867 SMIM10L2AP0DMW4 78 aa31.57■■■□□ 2.64
SCARF1-207ENST00000573867 SMIM10L2BP0DMW5 78 aa31.57■■■□□ 2.64
SCARF1-207ENST00000573867 GALNT17Q6IS24 598 aa31.57■■■□□ 2.64
SCARF1-207ENST00000573867 TBCKQ8TEA7 893 aa31.57■■■□□ 2.64
SCARF1-207ENST00000573867 NOD1Q9Y239 953 aa31.57■■■□□ 2.64
SCARF1-207ENST00000573867 GTF3C3Q9Y5Q9 886 aa31.57■■■□□ 2.64
SCARF1-207ENST00000573867 CCNE2O96020 404 aa31.56■■■□□ 2.64
SCARF1-207ENST00000573867 TMEM240Q5SV17 173 aa31.56■■■□□ 2.64
SCARF1-207ENST00000573867 OXER1Q8TDS5 423 aa31.56■■■□□ 2.64
SCARF1-207ENST00000573867 SDF4Q9BRK5 362 aa31.56■■■□□ 2.64
SCARF1-207ENST00000573867 RNPEPQ9H4A4 650 aa31.56■■■□□ 2.64
SCARF1-207ENST00000573867 ACTR2P61160 394 aa31.55■■■□□ 2.64
SCARF1-207ENST00000573867 PRR16Q569H4 304 aa31.55■■■□□ 2.64
SCARF1-207ENST00000573867 CCDC83Q8IWF9 413 aa31.55■■■□□ 2.64
SCARF1-207ENST00000573867 IL23AQ9NPF7 189 aa31.55■■■□□ 2.64
SCARF1-207ENST00000573867 DDX39AO00148 427 aaKnown RBP31.54■■■□□ 2.64
SCARF1-207ENST00000573867 TRIM71Q2Q1W2 868 aaKnown RBP31.54■■■□□ 2.64
SCARF1-207ENST00000573867 TANC1Q9C0D5 1861 aa31.53■■■□□ 2.64
SCARF1-207ENST00000573867 IPO5O00410 1097 aaKnown RBP31.53■■■□□ 2.64
SCARF1-207ENST00000573867 PITPNM1O00562 1244 aa31.53■■■□□ 2.64
SCARF1-207ENST00000573867 LGR5O75473 907 aa31.53■■■□□ 2.64
SCARF1-207ENST00000573867 USP11P51784 963 aa31.53■■■□□ 2.64
SCARF1-207ENST00000573867 SETQ01105 290 aaPredicted RBP31.53■■■□□ 2.64
SCARF1-207ENST00000573867 TBC1D32Q96NH3 1257 aa31.53■■■□□ 2.64
SCARF1-207ENST00000573867 ZNF577Q9BSK1 485 aa31.53■■■□□ 2.64
SCARF1-207ENST00000573867 ZNF215Q9UL58 517 aaPredicted RBP31.53■■■□□ 2.64
SCARF1-207ENST00000573867 EMSYQ7Z589 1322 aa31.52■■■□□ 2.64
SCARF1-207ENST00000573867 C17orf102A2RUQ5 167 aa31.52■■■□□ 2.64
SCARF1-207ENST00000573867 MARK3P27448 753 aa31.52■■■□□ 2.64
SCARF1-207ENST00000573867 RBL2Q08999 1139 aa31.52■■■□□ 2.64
SCARF1-207ENST00000573867 RABEP1Q15276 862 aa31.52■■■□□ 2.64
SCARF1-207ENST00000573867 ZNF365Q70YC5 407 aa31.52■■■□□ 2.64
SCARF1-207ENST00000573867 WASF1Q92558 559 aa31.52■■■□□ 2.64
SCARF1-207ENST00000573867 RNPC3Q96LT9 517 aaKnown RBP31.52■■■□□ 2.64
SCARF1-207ENST00000573867 SETD4Q9NVD3 440 aa31.52■■■□□ 2.64
SCARF1-207ENST00000573867 TREHO43280 583 aa31.51■■■□□ 2.63
SCARF1-207ENST00000573867 ATG7O95352 703 aa31.51■■■□□ 2.63
SCARF1-207ENST00000573867 TDP2O95551 362 aa31.51■■■□□ 2.63
SCARF1-207ENST00000573867 IQCF3P0C7M6 154 aa31.51■■■□□ 2.63
SCARF1-207ENST00000573867 FOSBP53539 338 aa31.51■■■□□ 2.63
SCARF1-207ENST00000573867 PTK7Q13308 1070 aa31.51■■■□□ 2.63
SCARF1-207ENST00000573867 BFSP2Q13515 415 aa31.51■■■□□ 2.63
SCARF1-207ENST00000573867 EARS2Q5JPH6 523 aaKnown RBP31.51■■■□□ 2.63
SCARF1-207ENST00000573867 KRT25Q7Z3Z0 450 aa31.51■■■□□ 2.63
SCARF1-207ENST00000573867 SCN5AQ14524 2016 aa31.51■■■□□ 2.63
SCARF1-207ENST00000573867 TRIP12Q14669 1992 aaPredicted RBP31.5■■■□□ 2.63
SCARF1-207ENST00000573867 XBP1P17861 261 aa31.5■■■□□ 2.63
SCARF1-207ENST00000573867 ADAM17P78536 824 aa31.5■■■□□ 2.63
SCARF1-207ENST00000573867 GPNMBQ14956 572 aa31.5■■■□□ 2.63
SCARF1-207ENST00000573867 NONOQ15233 471 aaKnown RBP eCLIP31.5■■■□□ 2.63
SCARF1-207ENST00000573867 INF2Q27J81 1249 aa31.5■■■□□ 2.63
SCARF1-207ENST00000573867 TRAF7Q6Q0C0 670 aa31.5■■■□□ 2.63
SCARF1-207ENST00000573867 SERINC5Q86VE9 423 aa31.5■■■□□ 2.63
SCARF1-207ENST00000573867 CAGE1Q8TC20 777 aa31.5■■■□□ 2.63
SCARF1-207ENST00000573867 GLG1Q92896 1179 aa31.5■■■□□ 2.63
SCARF1-207ENST00000573867 UPF2Q9HAU5 1272 aaKnown RBP31.5■■■□□ 2.63
SCARF1-207ENST00000573867 MSH4O15457 936 aa31.49■■■□□ 2.63
SCARF1-207ENST00000573867 CD2BP2O95400 341 aaKnown RBP31.49■■■□□ 2.63
SCARF1-207ENST00000573867 CKBP12277 381 aa31.49■■■□□ 2.63
SCARF1-207ENST00000573867 RASIP1Q5U651 963 aa31.49■■■□□ 2.63
SCARF1-207ENST00000573867 ABHD15Q6UXT9 468 aa31.49■■■□□ 2.63
SCARF1-207ENST00000573867 LMBR1Q8WVP7 490 aa31.49■■■□□ 2.63
SCARF1-207ENST00000573867 TNFRSF25Q93038 417 aa31.49■■■□□ 2.63
SCARF1-207ENST00000573867 ATP6V0A1Q93050 837 aa31.49■■■□□ 2.63
SCARF1-207ENST00000573867 GJA10Q969M2 543 aa31.49■■■□□ 2.63
SCARF1-207ENST00000573867 ZSCAN31Q96LW9 406 aaPredicted RBP31.49■■■□□ 2.63
SCARF1-207ENST00000573867 MBOAT7Q96N66 472 aa31.49■■■□□ 2.63
SCARF1-207ENST00000573867 SMARCAD1Q9H4L7 1026 aa31.49■■■□□ 2.63
SCARF1-207ENST00000573867 ERAP1Q9NZ08 941 aa31.49■■■□□ 2.63
SCARF1-207ENST00000573867 CYP3A7-CYP3A51PA0A087WV96 503 aa31.48■■■□□ 2.63
SCARF1-207ENST00000573867 IGKV6D-21A0A0A0MT36 114 aa31.48■■■□□ 2.63
SCARF1-207ENST00000573867 FAM205CA6NFA0 338 aa31.48■■■□□ 2.63
SCARF1-207ENST00000573867 CYP3A7P24462 503 aa31.48■■■□□ 2.63
SCARF1-207ENST00000573867 NR5A1Q13285 461 aa31.48■■■□□ 2.63
SCARF1-207ENST00000573867 PSRC1Q6PGN9 363 aaPredicted RBP31.48■■■□□ 2.63
SCARF1-207ENST00000573867 RETREG2Q8NC44 543 aa31.48■■■□□ 2.63
SCARF1-207ENST00000573867 AFAP1L1Q8TED9 768 aa31.48■■■□□ 2.63
SCARF1-207ENST00000573867 SLC34A2O95436 690 aa31.47■■■□□ 2.63
SCARF1-207ENST00000573867 Q4G0T1 1027 aa31.47■■■□□ 2.63
SCARF1-207ENST00000573867 DEFB128Q7Z7B8 93 aa31.47■■■□□ 2.63
SCARF1-207ENST00000573867 CCDC155Q8N6L0 562 aa31.47■■■□□ 2.63
SCARF1-207ENST00000573867 SH2B1Q9NRF2 756 aaPredicted RBP31.47■■■□□ 2.63
SCARF1-207ENST00000573867 TBC1D22BQ9NU19 505 aa31.47■■■□□ 2.63
SCARF1-207ENST00000573867 CXXC1Q9P0U4 656 aaPredicted RBP31.47■■■□□ 2.63
SCARF1-207ENST00000573867 SELPP16109 830 aa31.46■■■□□ 2.63
SCARF1-207ENST00000573867 FAM109BQ6ICB4 259 aaPredicted RBP31.46■■■□□ 2.63
SCARF1-207ENST00000573867 PIK3AP1Q6ZUJ8 805 aa31.46■■■□□ 2.63
SCARF1-207ENST00000573867 LRRC8DQ7L1W4 858 aa31.46■■■□□ 2.63
SCARF1-207ENST00000573867 CCDC60Q8IWA6 550 aaPredicted RBP31.46■■■□□ 2.63
SCARF1-207ENST00000573867 SLC5A5Q92911 643 aa31.46■■■□□ 2.63
SCARF1-207ENST00000573867 CCDC194A0A1B0GVG4 234 aa31.45■■■□□ 2.63
SCARF1-207ENST00000573867 FGBP02675 491 aa31.45■■■□□ 2.63
SCARF1-207ENST00000573867 MMP1P03956 469 aa31.45■■■□□ 2.63
SCARF1-207ENST00000573867 PLCB4Q15147 1175 aa31.45■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms