RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 UBE2ZQ9H832 354 aaPredicted RBP25.31■■□□□ 1.64
SNF8-216ENST00000573795 SEC63Q9UGP8 760 aaKnown RBP25.31■■□□□ 1.64
SNF8-216ENST00000573795 RALGAPA2Q2PPJ7 1873 aa25.31■■□□□ 1.64
SNF8-216ENST00000573795 ITGB5P18084 799 aa25.3■■□□□ 1.64
SNF8-216ENST00000573795 CASC1Q6TDU7 716 aa25.3■■□□□ 1.64
SNF8-216ENST00000573795 NLRX1Q86UT6 975 aa25.3■■□□□ 1.64
SNF8-216ENST00000573795 EPHX3Q9H6B9 360 aa25.3■■□□□ 1.64
SNF8-216ENST00000573795 TCF7P36402 384 aaPredicted RBP25.29■■□□□ 1.64
SNF8-216ENST00000573795 EPC2Q52LR7 807 aa25.29■■□□□ 1.64
SNF8-216ENST00000573795 RUFY4Q6ZNE9 571 aa25.29■■□□□ 1.64
SNF8-216ENST00000573795 RAB11FIP4Q86YS3 637 aa25.29■■□□□ 1.64
SNF8-216ENST00000573795 GPRASP2Q96D09 838 aa25.29■■□□□ 1.64
SNF8-216ENST00000573795 TMEM87BQ96K49 555 aa25.29■■□□□ 1.64
SNF8-216ENST00000573795 C1QTNF1Q9BXJ1 281 aa25.29■■□□□ 1.64
SNF8-216ENST00000573795 GSTTP1A0A1W2PQM5 241 aa25.28■■□□□ 1.64
SNF8-216ENST00000573795 hCG_1642624A0A1W2PR95 340 aa25.28■■□□□ 1.64
SNF8-216ENST00000573795 SLC27A2O14975 620 aa25.28■■□□□ 1.64
SNF8-216ENST00000573795 CHRNA1P02708 482 aa25.28■■□□□ 1.64
SNF8-216ENST00000573795 MCM5P33992 734 aa25.28■■□□□ 1.64
SNF8-216ENST00000573795 GNAQP50148 359 aa25.28■■□□□ 1.64
SNF8-216ENST00000573795 UBE2SQ16763 222 aa25.28■■□□□ 1.64
SNF8-216ENST00000573795 YME1L1Q96TA2 773 aa25.28■■□□□ 1.64
SNF8-216ENST00000573795 CD320Q9NPF0 282 aa25.28■■□□□ 1.64
SNF8-216ENST00000573795 NRCAMQ92823 1304 aa25.28■■□□□ 1.64
SNF8-216ENST00000573795 CCDC69A6NI79 296 aa25.27■■□□□ 1.64
SNF8-216ENST00000573795 UPP2O95045 317 aa25.27■■□□□ 1.64
SNF8-216ENST00000573795 LIFRP42702 1097 aa25.27■■□□□ 1.64
SNF8-216ENST00000573795 MGAT3Q09327 533 aa25.27■■□□□ 1.64
SNF8-216ENST00000573795 NFXL1Q6ZNB6 911 aa25.27■■□□□ 1.64
SNF8-216ENST00000573795 RPAINQ86UA6 219 aa25.27■■□□□ 1.64
SNF8-216ENST00000573795 GIMAP8Q8ND71 665 aaPredicted RBP25.27■■□□□ 1.64
SNF8-216ENST00000573795 APBB2Q92870 758 aa25.27■■□□□ 1.64
SNF8-216ENST00000573795 MRPL38Q96DV4 380 aaKnown RBP25.27■■□□□ 1.64
SNF8-216ENST00000573795 SAMD11Q96NU1 681 aa25.27■■□□□ 1.64
SNF8-216ENST00000573795 IFIH1Q9BYX4 1025 aaKnown RBP25.27■■□□□ 1.64
SNF8-216ENST00000573795 PSTPIP2Q9H939 334 aa25.27■■□□□ 1.64
SNF8-216ENST00000573795 UBIAD1Q9Y5Z9 338 aa25.27■■□□□ 1.64
SNF8-216ENST00000573795 TMTC3Q6ZXV5 915 aa25.26■■□□□ 1.63
SNF8-216ENST00000573795 TMTC2Q8N394 836 aa25.26■■□□□ 1.63
SNF8-216ENST00000573795 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.26■■□□□ 1.63
SNF8-216ENST00000573795 LRRC2Q9BYS8 371 aa25.26■■□□□ 1.63
SNF8-216ENST00000573795 EHMT1Q9H9B1 1298 aa25.26■■□□□ 1.63
SNF8-216ENST00000573795 H3BNC9 293 aa25.25■■□□□ 1.63
SNF8-216ENST00000573795 LINC00271P0C7V0 271 aa25.25■■□□□ 1.63
SNF8-216ENST00000573795 NECTIN1Q15223 517 aa25.25■■□□□ 1.63
SNF8-216ENST00000573795 LEXMQ3ZCV2 418 aa25.25■■□□□ 1.63
SNF8-216ENST00000573795 CREB3L3Q68CJ9 461 aa25.25■■□□□ 1.63
SNF8-216ENST00000573795 ESYT1Q9BSJ8 1104 aa25.25■■□□□ 1.63
SNF8-216ENST00000573795 CALM1P0DP23 149 aa25.24■■□□□ 1.63
SNF8-216ENST00000573795 CALM2P0DP24 149 aa25.24■■□□□ 1.63
SNF8-216ENST00000573795 CALM3P0DP25 149 aa25.24■■□□□ 1.63
SNF8-216ENST00000573795 GHRP10912 638 aa25.24■■□□□ 1.63
SNF8-216ENST00000573795 KCNA5P22460 613 aa25.24■■□□□ 1.63
SNF8-216ENST00000573795 MARK3P27448 753 aa25.24■■□□□ 1.63
SNF8-216ENST00000573795 PPFIA1Q13136 1202 aa25.24■■□□□ 1.63
SNF8-216ENST00000573795 MARCH8Q5T0T0 291 aa25.24■■□□□ 1.63
SNF8-216ENST00000573795 TMEM192Q8IY95 271 aa25.24■■□□□ 1.63
SNF8-216ENST00000573795 SEPT1Q8WYJ6 367 aa25.24■■□□□ 1.63
SNF8-216ENST00000573795 CDHR1Q96JP9 859 aa25.24■■□□□ 1.63
SNF8-216ENST00000573795 RC3H2Q9HBD1 1191 aaKnown RBP25.24■■□□□ 1.63
SNF8-216ENST00000573795 PKD2L1Q9P0L9 805 aa25.24■■□□□ 1.63
SNF8-216ENST00000573795 MYO7AQ13402 2215 aa25.24■■□□□ 1.63
SNF8-216ENST00000573795 MBLAC1A4D2B0 266 aaPredicted RBP25.23■■□□□ 1.63
SNF8-216ENST00000573795 GPM6BQ13491 265 aa25.23■■□□□ 1.63
SNF8-216ENST00000573795 MTMR1Q13613 665 aa25.23■■□□□ 1.63
SNF8-216ENST00000573795 LPIN1Q14693 890 aa25.23■■□□□ 1.63
SNF8-216ENST00000573795 GRIK4Q16099 956 aa25.23■■□□□ 1.63
SNF8-216ENST00000573795 TAF2Q6P1X5 1199 aa25.23■■□□□ 1.63
SNF8-216ENST00000573795 CCDC82Q8N4S0 544 aa25.23■■□□□ 1.63
SNF8-216ENST00000573795 PCYT2Q99447 389 aa25.23■■□□□ 1.63
SNF8-216ENST00000573795 LRFN3Q9BTN0 628 aa25.23■■□□□ 1.63
SNF8-216ENST00000573795 C11orf16Q9NQ32 467 aa25.23■■□□□ 1.63
SNF8-216ENST00000573795 JADE2Q9NQC1 790 aa25.23■■□□□ 1.63
SNF8-216ENST00000573795 ERAP1Q9NZ08 941 aa25.23■■□□□ 1.63
SNF8-216ENST00000573795 PCDHA6Q9UN73 950 aa25.23■■□□□ 1.63
SNF8-216ENST00000573795 PCDHA8Q9Y5H6 950 aa25.23■■□□□ 1.63
SNF8-216ENST00000573795 TTC3P53804 2025 aa25.22■■□□□ 1.63
SNF8-216ENST00000573795 SGMS1Q86VZ5 419 aa25.22■■□□□ 1.63
SNF8-216ENST00000573795 FANCBQ8NB91 859 aa25.22■■□□□ 1.63
SNF8-216ENST00000573795 ZBTB10Q96DT7 871 aa25.22■■□□□ 1.63
SNF8-216ENST00000573795 TUBE1Q9UJT0 475 aa25.22■■□□□ 1.63
SNF8-216ENST00000573795 SLC12A7Q9Y666 1083 aa25.22■■□□□ 1.63
SNF8-216ENST00000573795 CNTNAP5Q8WYK1 1306 aa25.21■■□□□ 1.63
SNF8-216ENST00000573795 IL9P15248 144 aa25.21■■□□□ 1.63
SNF8-216ENST00000573795 COL19A1Q14993 1142 aa25.21■■□□□ 1.63
SNF8-216ENST00000573795 PTPROQ16827 1216 aa25.21■■□□□ 1.63
SNF8-216ENST00000573795 TIGD5Q53EQ6 642 aa25.21■■□□□ 1.63
SNF8-216ENST00000573795 TYW1BQ6NUM6 668 aa25.21■■□□□ 1.63
SNF8-216ENST00000573795 MICU3Q86XE3 530 aa25.21■■□□□ 1.63
SNF8-216ENST00000573795 NEK9Q8TD19 979 aa25.21■■□□□ 1.63
SNF8-216ENST00000573795 DNAJB3Q8WWF6 145 aa25.21■■□□□ 1.63
SNF8-216ENST00000573795 LOXHD1Q8IVV2 1947 aa25.2■■□□□ 1.62
SNF8-216ENST00000573795 SPDYE3A6NKU9 549 aa25.2■■□□□ 1.62
SNF8-216ENST00000573795 TCEAL5Q5H9L2 206 aa25.2■■□□□ 1.62
SNF8-216ENST00000573795 FBXO47Q5MNV8 452 aa25.2■■□□□ 1.62
SNF8-216ENST00000573795 WWC2Q6AWC2 1192 aa25.2■■□□□ 1.62
SNF8-216ENST00000573795 HEATR3Q7Z4Q2 680 aa25.2■■□□□ 1.62
SNF8-216ENST00000573795 FAM178BQ8IXR5 827 aa25.2■■□□□ 1.62
SNF8-216ENST00000573795 BANK1Q8NDB2 785 aa25.2■■□□□ 1.62
SNF8-216ENST00000573795 LINC01599Q8WXQ3 324 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms