RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 TMOD1P28289 359 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 MXI1P50539 228 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 ESRRGP62508 458 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 MUM1L1Q5H9M0 696 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 APLFQ8IW19 511 aaPredicted RBP13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 GPKOWQ92917 476 aaPredicted RBP eCLIP13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 PSMD1Q99460 953 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 MAP3K14Q99558 947 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 TMEM60Q9H2L4 133 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 SERPINA10Q9UK55 444 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 IVNS1ABPQ9Y6Y0 642 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 TTC4O95801 387 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 ABCB5Q2M3G0 1257 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 FAM102BQ5T8I3 360 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 RASIP1Q5U651 963 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 TEX2Q8IWB9 1127 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 SDCCAG3Q96C92 435 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 GCNT4Q9P109 453 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 USP32Q8NFA0 1604 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 ENC1O14682 589 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 EXOSC10Q01780 885 aaKnown RBP13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 RPS6KA2Q15349 733 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 TRIM72Q6ZMU5 477 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 TIPINQ9BVW5 301 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 BATF3Q9NR55 127 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 STOML1Q9UBI4 398 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 PRR36Q9H6K5 1346 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 KIAA0391O15091 583 aaKnown RBP13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 PLTPP55058 493 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 MESDQ14696 234 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 NAALADL2Q58DX5 795 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 ARHGEF16Q5VV41 709 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 PDIK1LQ8N165 341 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 NLGN1Q8N2Q7 840 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 MGARPQ8TDB4 240 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 MOV10L1Q9BXT6 1211 aaKnown RBP13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 ATP8A1Q9Y2Q0 1164 aa13.38□□□□□ -0.27
PCDHGA9-201ENST00000573521 LOC102724428A0A0B4J2F2 783 aa13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 A0A1B0GTH6 734 aa13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 hCG_1642624A0A1W2PR95 340 aa13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 TXNDC9O14530 226 aa13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 ATP1A3P13637 1013 aa13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 EIF6P56537 245 aaKnown RBP13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 SIK1P57059 783 aa13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 IQCB1Q15051 598 aa13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 USH1GQ495M9 461 aa13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 NSMFQ6X4W1 530 aa13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 DHX40Q8IX18 779 aaKnown RBP13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 PUS3Q9BZE2 481 aaKnown RBP13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 CPDO75976 1380 aa13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 GMNCA6NCL1 334 aa13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 MT-ND3P03897 115 aa13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 SCP2P22307 547 aa13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 ATP2C1P98194 919 aaPredicted RBP13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 NR5A1Q13285 461 aa13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 PDIA5Q14554 519 aa13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 TTLL11Q8NHH1 800 aa13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 TAF1DQ9H5J8 278 aaPredicted RBP13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 PACSIN2Q9UNF0 486 aaPredicted RBP13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 M0QZ92 97 aa13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 SMAPO00193 183 aa13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 FDX1P10109 184 aa13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 HARSP12081 509 aaKnown RBP13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 KLHL38Q2WGJ6 581 aa13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 RASGRP2Q7LDG7 609 aa13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 POMGNT1Q8WZA1 660 aa13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 STK32BQ9NY57 414 aa13.37□□□□□ -0.27
PCDHGA9-201ENST00000573521 A6NJR5 290 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 MAP3K7O43318 606 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 KRT37O76014 449 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 MOCS3O95396 460 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 NBPF20Q3BBV1 942 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 TEDDM1Q5T9Z0 273 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 KCNB2Q92953 911 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 GJA10Q969M2 543 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 NOVA2Q9UNW9 492 aaKnown RBP13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 ABCB11O95342 1321 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 NEXMIFQ5QGS0 1516 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 YARSP54577 528 aaKnown RBP13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 GTF2IP78347 998 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 EPSTI1Q96J88 318 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 TJP3O95049 919 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 PIK3CAP42336 1068 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 PPP2R2AP63151 447 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 C2orf54Q08AI8 447 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 TFDP2Q14188 446 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 TBC1D9BQ66K14 1250 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 NIM1KQ8IY84 436 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 LCORLQ8N3X6 602 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 ANKRD36BP1Q96IX9 119 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 SUGT1Q9Y2Z0 365 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 NRKQ7Z2Y5 1582 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 PPFIA2O75334 1257 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 SMARCA1P28370 1054 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 TAF12Q16514 161 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 KCTD16Q68DU8 428 aa13.36□□□□□ -0.27
PCDHGA9-201ENST00000573521 PIP4K2CQ8TBX8 421 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms