RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 SARSP49591 514 aaKnown RBP15.32■□□□□ 0.04
CCDC40-209ENST00000573474 DPYDQ12882 1025 aa15.32■□□□□ 0.04
CCDC40-209ENST00000573474 MAP2K5Q13163 448 aa15.32■□□□□ 0.04
CCDC40-209ENST00000573474 STX1AQ16623 288 aa15.32■□□□□ 0.04
CCDC40-209ENST00000573474 POTEBQ6S5H4 581 aa15.32■□□□□ 0.04
CCDC40-209ENST00000573474 MAMDC4Q6UXC1 1216 aa15.32■□□□□ 0.04
CCDC40-209ENST00000573474 ARMCX2Q7L311 632 aa15.32■□□□□ 0.04
CCDC40-209ENST00000573474 STAMQ92783 540 aa15.32■□□□□ 0.04
CCDC40-209ENST00000573474 C7orf25Q9BPX7 421 aa15.32■□□□□ 0.04
CCDC40-209ENST00000573474 RGL1Q9NZL6 768 aa15.32■□□□□ 0.04
CCDC40-209ENST00000573474 DNM3Q9UQ16 869 aa15.32■□□□□ 0.04
CCDC40-209ENST00000573474 PLXNB2O15031 1838 aa15.31■□□□□ 0.04
CCDC40-209ENST00000573474 ZNFX1Q9P2E3 1918 aaKnown RBP15.31■□□□□ 0.04
CCDC40-209ENST00000573474 FSD2A1L4K1 749 aa15.31■□□□□ 0.04
CCDC40-209ENST00000573474 POTEFA5A3E0 1075 aa15.31■□□□□ 0.04
CCDC40-209ENST00000573474 WDR64B1ANS9 1081 aa15.31■□□□□ 0.04
CCDC40-209ENST00000573474 CAVIN2O95810 425 aa15.31■□□□□ 0.04
CCDC40-209ENST00000573474 P4HBP07237 508 aaKnown RBP15.31■□□□□ 0.04
CCDC40-209ENST00000573474 NLRP12P59046 1061 aa15.31■□□□□ 0.04
CCDC40-209ENST00000573474 SP2Q02086 613 aa15.31■□□□□ 0.04
CCDC40-209ENST00000573474 CYP4A11Q02928 519 aa15.31■□□□□ 0.04
CCDC40-209ENST00000573474 NEDD9Q14511 834 aa15.31■□□□□ 0.04
CCDC40-209ENST00000573474 MCM6Q14566 821 aa15.31■□□□□ 0.04
CCDC40-209ENST00000573474 POTEGQ6S5H5 508 aa15.31■□□□□ 0.04
CCDC40-209ENST00000573474 EEPD1Q7L9B9 569 aa15.31■□□□□ 0.04
CCDC40-209ENST00000573474 KCNK18Q7Z418 384 aa15.31■□□□□ 0.04
CCDC40-209ENST00000573474 TPH2Q8IWU9 490 aa15.31■□□□□ 0.04
CCDC40-209ENST00000573474 SMAP1Q8IYB5 467 aaPredicted RBP15.31■□□□□ 0.04
CCDC40-209ENST00000573474 MSL3Q8N5Y2 521 aaKnown RBP15.31■□□□□ 0.04
CCDC40-209ENST00000573474 MAML3Q96JK9 1138 aa15.31■□□□□ 0.04
CCDC40-209ENST00000573474 GSDMAQ96QA5 445 aa15.31■□□□□ 0.04
CCDC40-209ENST00000573474 JPH1Q9HDC5 661 aaPredicted RBP15.31■□□□□ 0.04
CCDC40-209ENST00000573474 SLC9A2Q9UBY0 812 aa15.31■□□□□ 0.04
CCDC40-209ENST00000573474 SAMM50Q9Y512 469 aa15.31■□□□□ 0.04
CCDC40-209ENST00000573474 E9PMD0 336 aa15.3■□□□□ 0.04
CCDC40-209ENST00000573474 BIN1O00499 593 aa15.3■□□□□ 0.04
CCDC40-209ENST00000573474 CCNE2O96020 404 aa15.3■□□□□ 0.04
CCDC40-209ENST00000573474 HOXC6P09630 235 aa15.3■□□□□ 0.04
CCDC40-209ENST00000573474 PLA2G4BP0C869 781 aa15.3■□□□□ 0.04
CCDC40-209ENST00000573474 VEGFBP49765 207 aa15.3■□□□□ 0.04
CCDC40-209ENST00000573474 CUL4BQ13620 913 aa15.3■□□□□ 0.04
CCDC40-209ENST00000573474 CTTNQ14247 550 aaKnown RBP15.3■□□□□ 0.04
CCDC40-209ENST00000573474 TRIML1Q8N9V2 468 aa15.3■□□□□ 0.04
CCDC40-209ENST00000573474 USP6NLQ92738 828 aa15.3■□□□□ 0.04
CCDC40-209ENST00000573474 NACC1Q96RE7 527 aa15.3■□□□□ 0.04
CCDC40-209ENST00000573474 BLZF1Q9H2G9 400 aa15.3■□□□□ 0.04
CCDC40-209ENST00000573474 ZSWIM4Q9H7M6 989 aa15.3■□□□□ 0.04
CCDC40-209ENST00000573474 VTA1Q9NP79 307 aa15.3■□□□□ 0.04
CCDC40-209ENST00000573474 MAN1B1Q9UKM7 699 aa15.3■□□□□ 0.04
CCDC40-209ENST00000573474 PCDHA10Q9Y5I2 948 aa15.3■□□□□ 0.04
CCDC40-209ENST00000573474 ZNF236Q9UL36 1845 aa15.29■□□□□ 0.04
CCDC40-209ENST00000573474 SYNGAP1Q96PV0 1343 aa15.29■□□□□ 0.04
CCDC40-209ENST00000573474 TNPO2O14787 897 aaKnown RBP15.29■□□□□ 0.04
CCDC40-209ENST00000573474 LYPLA2O95372 231 aa15.29■□□□□ 0.04
CCDC40-209ENST00000573474 EYA4O95677 639 aa15.29■□□□□ 0.04
CCDC40-209ENST00000573474 RPN1P04843 607 aaKnown RBP15.29■□□□□ 0.04
CCDC40-209ENST00000573474 UBA1P22314 1058 aaKnown RBP15.29■□□□□ 0.04
CCDC40-209ENST00000573474 CASP1P29466 404 aa15.29■□□□□ 0.04
CCDC40-209ENST00000573474 RGS2P41220 211 aa15.29■□□□□ 0.04
CCDC40-209ENST00000573474 QARSP47897 775 aaKnown RBP15.29■□□□□ 0.04
CCDC40-209ENST00000573474 PSMC6P62333 389 aa15.29■□□□□ 0.04
CCDC40-209ENST00000573474 DHX8Q14562 1220 aaKnown RBP15.29■□□□□ 0.04
CCDC40-209ENST00000573474 TTLL4Q14679 1199 aa15.29■□□□□ 0.04
CCDC40-209ENST00000573474 ANO6Q4KMQ2 910 aa15.29■□□□□ 0.04
CCDC40-209ENST00000573474 CNNM4Q6P4Q7 775 aa15.29■□□□□ 0.04
CCDC40-209ENST00000573474 CYFIP1Q7L576 1253 aa15.29■□□□□ 0.04
CCDC40-209ENST00000573474 FBXO16Q8IX29 292 aaPredicted RBP15.29■□□□□ 0.04
CCDC40-209ENST00000573474 NPLOC4Q8TAT6 608 aa15.29■□□□□ 0.04
CCDC40-209ENST00000573474 SCFD2Q8WU76 684 aa15.29■□□□□ 0.04
CCDC40-209ENST00000573474 SOCS4Q8WXH5 440 aa15.29■□□□□ 0.04
CCDC40-209ENST00000573474 LXNQ9BS40 222 aa15.29■□□□□ 0.04
CCDC40-209ENST00000573474 TINF2Q9BSI4 451 aa15.29■□□□□ 0.04
CCDC40-209ENST00000573474 CFHR5Q9BXR6 569 aa15.29■□□□□ 0.04
CCDC40-209ENST00000573474 TRIM9Q9C026 710 aa15.29■□□□□ 0.04
CCDC40-209ENST00000573474 RBSNQ9H1K0 784 aa15.29■□□□□ 0.04
CCDC40-209ENST00000573474 BCAS3Q9H6U6 928 aa15.29■□□□□ 0.04
CCDC40-209ENST00000573474 BMP2KQ9NSY1 1161 aaPredicted RBP15.29■□□□□ 0.04
CCDC40-209ENST00000573474 RMND1Q9NWS8 449 aa15.29■□□□□ 0.04
CCDC40-209ENST00000573474 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.29■□□□□ 0.04
CCDC40-209ENST00000573474 DDX41Q9UJV9 622 aaKnown RBP15.29■□□□□ 0.04
CCDC40-209ENST00000573474 GJD2Q9UKL4 321 aa15.29■□□□□ 0.04
CCDC40-209ENST00000573474 RBM47A0AV96 593 aaKnown RBP15.28■□□□□ 0.04
CCDC40-209ENST00000573474 MYMKA6NI61 221 aa15.28■□□□□ 0.04
CCDC40-209ENST00000573474 SSBP05455 408 aaKnown RBP eCLIP15.28■□□□□ 0.04
CCDC40-209ENST00000573474 PSAPP07602 524 aa15.28■□□□□ 0.04
CCDC40-209ENST00000573474 SLC12A3P55017 1021 aa15.28■□□□□ 0.04
CCDC40-209ENST00000573474 FCGRTP55899 365 aa15.28■□□□□ 0.04
CCDC40-209ENST00000573474 ACTR2P61160 394 aa15.28■□□□□ 0.04
CCDC40-209ENST00000573474 PSMC5P62195 406 aa15.28■□□□□ 0.04
CCDC40-209ENST00000573474 MORC3Q14149 939 aa15.28■□□□□ 0.04
CCDC40-209ENST00000573474 MIS18BP1Q6P0N0 1132 aa15.28■□□□□ 0.04
CCDC40-209ENST00000573474 CCDC62Q6P9F0 684 aa15.28■□□□□ 0.04
CCDC40-209ENST00000573474 ABHD15Q6UXT9 468 aa15.28■□□□□ 0.04
CCDC40-209ENST00000573474 SYT2Q8N9I0 419 aaPredicted RBP15.28■□□□□ 0.04
CCDC40-209ENST00000573474 BANK1Q8NDB2 785 aa15.28■□□□□ 0.04
CCDC40-209ENST00000573474 CCDC47Q96A33 483 aaKnown RBP15.28■□□□□ 0.04
CCDC40-209ENST00000573474 NAT10Q9H0A0 1025 aaKnown RBP15.28■□□□□ 0.04
CCDC40-209ENST00000573474 DNAJC25Q9H1X3 360 aa15.28■□□□□ 0.04
CCDC40-209ENST00000573474 LRRC37A2A6NM11 1700 aa15.27■□□□□ 0.04
CCDC40-209ENST00000573474 A0A087WWV3 80 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms