RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 VIPAS39Q9H9C1 493 aa12.38□□□□□ -0.43
RPAIN-212ENST00000573126 ZC3H4Q9UPT8 1303 aaKnown RBP12.37□□□□□ -0.43
RPAIN-212ENST00000573126 TCP1P17987 556 aaKnown RBP12.37□□□□□ -0.43
RPAIN-212ENST00000573126 NR2F2P24468 414 aa12.37□□□□□ -0.43
RPAIN-212ENST00000573126 GGCXP38435 758 aa12.37□□□□□ -0.43
RPAIN-212ENST00000573126 USP11P51784 963 aa12.37□□□□□ -0.43
RPAIN-212ENST00000573126 SLC12A3P55017 1021 aa12.37□□□□□ -0.43
RPAIN-212ENST00000573126 SLC27A3Q5K4L6 730 aa12.37□□□□□ -0.43
RPAIN-212ENST00000573126 CCDC70Q6NSX1 233 aa12.37□□□□□ -0.43
RPAIN-212ENST00000573126 TBC1D5Q92609 795 aa12.37□□□□□ -0.43
RPAIN-212ENST00000573126 MS4A14Q96JA4 679 aa12.37□□□□□ -0.43
RPAIN-212ENST00000573126 CEP63Q96MT8 703 aa12.37□□□□□ -0.43
RPAIN-212ENST00000573126 ADAMTS1Q9UHI8 967 aa12.37□□□□□ -0.43
RPAIN-212ENST00000573126 LTBP1Q14766 1721 aa12.37□□□□□ -0.43
RPAIN-212ENST00000573126 ACTN2P35609 894 aa12.37□□□□□ -0.43
RPAIN-212ENST00000573126 CYP4A11Q02928 519 aa12.37□□□□□ -0.43
RPAIN-212ENST00000573126 ICA1Q05084 483 aa12.37□□□□□ -0.43
RPAIN-212ENST00000573126 SPIRE1Q08AE8 756 aa12.37□□□□□ -0.43
RPAIN-212ENST00000573126 MAPK8IP2Q13387 824 aaPredicted RBP12.37□□□□□ -0.43
RPAIN-212ENST00000573126 KLHDC7AQ5VTJ3 777 aa12.37□□□□□ -0.43
RPAIN-212ENST00000573126 SIAH1Q8IUQ4 282 aa12.37□□□□□ -0.43
RPAIN-212ENST00000573126 ZFP91Q96JP5 570 aaPredicted RBP12.37□□□□□ -0.43
RPAIN-212ENST00000573126 EHD4Q9H223 541 aa12.37□□□□□ -0.43
RPAIN-212ENST00000573126 DHX36Q9H2U1 1008 aaKnown RBP12.37□□□□□ -0.43
RPAIN-212ENST00000573126 SPATA31A6Q5VVP1 1343 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 FAM86B1E9PN63 330 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 PJA2O43164 708 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 FTCDO95954 541 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 SERPING1P05155 500 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 FAM86B2P0C5J1 330 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 HOXA13P31271 388 aaPredicted RBP12.36□□□□□ -0.43
RPAIN-212ENST00000573126 AARSP49588 968 aaKnown RBP eCLIP12.36□□□□□ -0.43
RPAIN-212ENST00000573126 HAUS3Q68CZ6 603 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 FOXR2Q6PJQ5 311 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 SH3BP5LQ7L8J4 393 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 MMGT1Q8N4V1 131 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 GOLGA5Q8TBA6 731 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 ETNPPLQ8TBG4 499 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 NAP1L4Q99733 375 aaKnown RBP12.36□□□□□ -0.43
RPAIN-212ENST00000573126 EDEM3Q9BZQ6 932 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 PLEKHA4Q9H4M7 779 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 BCAS3Q9H6U6 928 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 RBM12Q9NTZ6 932 aaKnown RBP12.36□□□□□ -0.43
RPAIN-212ENST00000573126 ZNF219Q9P2Y4 722 aaPredicted RBP12.36□□□□□ -0.43
RPAIN-212ENST00000573126 FAM198AQ9UFP1 575 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 A0A087X0T9 212 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 F5H6K3 240 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 ONECUT3O60422 494 aaPredicted RBP12.36□□□□□ -0.43
RPAIN-212ENST00000573126 FAM228BP0C875 321 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 ACTN1P12814 892 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 NPR1P16066 1061 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 PRLRP16471 622 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 KLRC1P26715 233 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 KLRC3Q07444 240 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 KCNH2Q12809 1159 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 MUM1L1Q5H9M0 696 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 LEKR1Q6ZMV7 388 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 SND1Q7KZF4 910 aaKnown RBP eCLIP12.36□□□□□ -0.43
RPAIN-212ENST00000573126 SLFN12Q8IYM2 578 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 CYP2W1Q8TAV3 490 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 ZDHHC15Q96MV8 337 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 PACSIN1Q9BY11 444 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 PI4KBQ9UBF8 816 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 FAM184BQ9ULE4 1060 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 PACSIN2Q9UNF0 486 aaPredicted RBP12.36□□□□□ -0.43
RPAIN-212ENST00000573126 SRCAPQ6ZRS2 3230 aa12.36□□□□□ -0.43
RPAIN-212ENST00000573126 CETN3O15182 167 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 PALMO75781 387 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 PRPF6O94906 941 aaKnown RBP12.35□□□□□ -0.43
RPAIN-212ENST00000573126 GNA14O95837 355 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 KLHL30Q0D2K2 578 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 KIAA0753Q2KHM9 967 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 SLC30A10Q6XR72 485 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 SFR1Q86XK3 245 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 SPICE1Q8N0Z3 855 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 AENQ8WTP8 325 aaKnown RBP12.35□□□□□ -0.43
RPAIN-212ENST00000573126 DCAF4Q8WV16 495 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 REEP2Q9BRK0 252 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 GLT8D2Q9H1C3 349 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 LRRC37AA6NMS7 1700 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 CYP3A7-CYP3A51PA0A087WV96 503 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 SPDYE3A6NKU9 549 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 RSPH10B2B2RC85 870 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 RBAK-RBAKDNI3L0D1 243 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 AGPSO00116 658 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 RSPH10BP0C881 870 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 SPATA31C1P0DKV0 1188 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 CYP3A7P24462 503 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 PAFAH1B1P43034 410 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 MARSP56192 900 aaKnown RBP12.35□□□□□ -0.43
RPAIN-212ENST00000573126 GIT2Q14161 759 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 DNAAF5Q86Y56 855 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 CRYGNQ8WXF5 182 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 ZNF622Q969S3 477 aaKnown RBP eCLIP12.35□□□□□ -0.43
RPAIN-212ENST00000573126 LENG9Q96B70 501 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 AMNQ9BXJ7 453 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 NUCKS1Q9H1E3 243 aaKnown RBP12.35□□□□□ -0.43
RPAIN-212ENST00000573126 TMX4Q9H1E5 349 aaPredicted RBP12.35□□□□□ -0.43
RPAIN-212ENST00000573126 NYAP2Q9P242 653 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 DNM3Q9UQ16 869 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms