RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 AFAP1L1Q8TED9 768 aa18.4■□□□□ 0.54
NDE1-205ENST00000572756 AIFM3Q96NN9 605 aa18.4■□□□□ 0.54
NDE1-205ENST00000572756 JPH1Q9HDC5 661 aaPredicted RBP18.4■□□□□ 0.54
NDE1-205ENST00000572756 ZNF215Q9UL58 517 aaPredicted RBP18.4■□□□□ 0.54
NDE1-205ENST00000572756 STK36Q9NRP7 1315 aa18.4■□□□□ 0.54
NDE1-205ENST00000572756 M0R2N6 131 aa18.39■□□□□ 0.53
NDE1-205ENST00000572756 EDIL3O43854 480 aa18.39■□□□□ 0.53
NDE1-205ENST00000572756 CTDNEP1O95476 244 aa18.39■□□□□ 0.53
NDE1-205ENST00000572756 FGBP02675 491 aa18.39■□□□□ 0.53
NDE1-205ENST00000572756 CKBP12277 381 aa18.39■□□□□ 0.53
NDE1-205ENST00000572756 CIITAP33076 1130 aa18.39■□□□□ 0.53
NDE1-205ENST00000572756 NLRP5P59047 1200 aa18.39■□□□□ 0.53
NDE1-205ENST00000572756 ADAM17P78536 824 aa18.39■□□□□ 0.53
NDE1-205ENST00000572756 GPNMBQ14956 572 aa18.39■□□□□ 0.53
NDE1-205ENST00000572756 TRAF7Q6Q0C0 670 aa18.39■□□□□ 0.53
NDE1-205ENST00000572756 SERINC5Q86VE9 423 aa18.39■□□□□ 0.53
NDE1-205ENST00000572756 DEFB123Q8N688 67 aa18.39■□□□□ 0.53
NDE1-205ENST00000572756 RNPEPQ9H4A4 650 aa18.39■□□□□ 0.53
NDE1-205ENST00000572756 CXXC1Q9P0U4 656 aaPredicted RBP18.39■□□□□ 0.53
NDE1-205ENST00000572756 SLC9A2Q9UBY0 812 aa18.39■□□□□ 0.53
NDE1-205ENST00000572756 EMSYQ7Z589 1322 aa18.39■□□□□ 0.53
NDE1-205ENST00000572756 GBF1Q92538 1859 aa18.39■□□□□ 0.53
NDE1-205ENST00000572756 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.38■□□□□ 0.53
NDE1-205ENST00000572756 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.38■□□□□ 0.53
NDE1-205ENST00000572756 C17orf102A2RUQ5 167 aa18.38■□□□□ 0.53
NDE1-205ENST00000572756 LGR5O75473 907 aa18.38■□□□□ 0.53
NDE1-205ENST00000572756 CDKL5O76039 1030 aa18.38■□□□□ 0.53
NDE1-205ENST00000572756 LARGE1O95461 756 aa18.38■□□□□ 0.53
NDE1-205ENST00000572756 SELPP16109 830 aa18.38■□□□□ 0.53
NDE1-205ENST00000572756 ZNF76P36508 570 aa18.38■□□□□ 0.53
NDE1-205ENST00000572756 NEK4P51957 841 aa18.38■□□□□ 0.53
NDE1-205ENST00000572756 ME3Q16798 604 aa18.38■□□□□ 0.53
NDE1-205ENST00000572756 OTOP2Q7RTS6 562 aa18.38■□□□□ 0.53
NDE1-205ENST00000572756 DEFB128Q7Z7B8 93 aa18.38■□□□□ 0.53
NDE1-205ENST00000572756 PLA2G4DQ86XP0 818 aa18.38■□□□□ 0.53
NDE1-205ENST00000572756 DAGLBQ8NCG7 672 aa18.38■□□□□ 0.53
NDE1-205ENST00000572756 PCYT2Q99447 389 aa18.38■□□□□ 0.53
NDE1-205ENST00000572756 SDF4Q9BRK5 362 aa18.38■□□□□ 0.53
NDE1-205ENST00000572756 MTMR10Q9NXD2 777 aa18.38■□□□□ 0.53
NDE1-205ENST00000572756 PCDHA4Q9UN74 947 aa18.38■□□□□ 0.53
NDE1-205ENST00000572756 WDR81Q562E7 1941 aa18.37■□□□□ 0.53
NDE1-205ENST00000572756 DHX15O43143 795 aaKnown RBP18.37■□□□□ 0.53
NDE1-205ENST00000572756 ACTR2P61160 394 aa18.37■□□□□ 0.53
NDE1-205ENST00000572756 LRRC8DQ7L1W4 858 aa18.37■□□□□ 0.53
NDE1-205ENST00000572756 ATP6V0A1Q93050 837 aa18.37■□□□□ 0.53
NDE1-205ENST00000572756 LENG9Q96B70 501 aa18.37■□□□□ 0.53
NDE1-205ENST00000572756 SETD4Q9NVD3 440 aa18.37■□□□□ 0.53
NDE1-205ENST00000572756 TREHO43280 583 aa18.36■□□□□ 0.53
NDE1-205ENST00000572756 ATG7O95352 703 aa18.36■□□□□ 0.53
NDE1-205ENST00000572756 CCNE2O96020 404 aa18.36■□□□□ 0.53
NDE1-205ENST00000572756 SETQ01105 290 aaPredicted RBP18.36■□□□□ 0.53
NDE1-205ENST00000572756 GALNT17Q6IS24 598 aa18.36■□□□□ 0.53
NDE1-205ENST00000572756 BLIDQ8IZY5 108 aa18.36■□□□□ 0.53
NDE1-205ENST00000572756 NECAB1Q8N987 351 aa18.36■□□□□ 0.53
NDE1-205ENST00000572756 GTF3C6Q969F1 213 aa18.36■□□□□ 0.53
NDE1-205ENST00000572756 KIF2CQ99661 725 aa18.36■□□□□ 0.53
NDE1-205ENST00000572756 MTIF3Q9H2K0 278 aaKnown RBP18.36■□□□□ 0.53
NDE1-205ENST00000572756 SMARCAD1Q9H4L7 1026 aa18.36■□□□□ 0.53
NDE1-205ENST00000572756 ERAP1Q9NZ08 941 aa18.36■□□□□ 0.53
NDE1-205ENST00000572756 PTPRSQ13332 1948 aa18.35■□□□□ 0.53
NDE1-205ENST00000572756 CDH23Q9H251 3354 aa18.35■□□□□ 0.53
NDE1-205ENST00000572756 NRCAMQ92823 1304 aa18.35■□□□□ 0.53
NDE1-205ENST00000572756 IGKV6D-21A0A0A0MT36 114 aa18.35■□□□□ 0.53
NDE1-205ENST00000572756 IPO5O00410 1097 aaKnown RBP18.35■□□□□ 0.53
NDE1-205ENST00000572756 DTNBO60941 627 aa18.35■□□□□ 0.53
NDE1-205ENST00000572756 PARNO95453 639 aaKnown RBP18.35■□□□□ 0.53
NDE1-205ENST00000572756 CXCL10P02778 98 aa18.35■□□□□ 0.53
NDE1-205ENST00000572756 GNAT1P11488 350 aa18.35■□□□□ 0.53
NDE1-205ENST00000572756 USP11P51784 963 aa18.35■□□□□ 0.53
NDE1-205ENST00000572756 ZNF618Q5T7W0 954 aa18.35■□□□□ 0.53
NDE1-205ENST00000572756 LMBR1Q8WVP7 490 aa18.35■□□□□ 0.53
NDE1-205ENST00000572756 PHF20Q9BVI0 1012 aa18.35■□□□□ 0.53
NDE1-205ENST00000572756 COL6A3P12111 3177 aa18.35■□□□□ 0.53
NDE1-205ENST00000572756 MYH9P35579 1960 aaKnown RBP18.35■□□□□ 0.53
NDE1-205ENST00000572756 TMEM265A0A087WTH1 108 aa18.34■□□□□ 0.53
NDE1-205ENST00000572756 GRXCR1A8MXD5 290 aa18.34■□□□□ 0.53
NDE1-205ENST00000572756 NBNO60934 754 aa18.34■□□□□ 0.53
NDE1-205ENST00000572756 FDPSP14324 419 aaKnown RBP18.34■□□□□ 0.53
NDE1-205ENST00000572756 DNAJB2P25686 324 aa18.34■□□□□ 0.53
NDE1-205ENST00000572756 MARK3P27448 753 aa18.34■□□□□ 0.53
NDE1-205ENST00000572756 ST3GAL1Q11201 340 aa18.34■□□□□ 0.53
NDE1-205ENST00000572756 MBTPS1Q14703 1052 aa18.34■□□□□ 0.53
NDE1-205ENST00000572756 PRR16Q569H4 304 aa18.34■□□□□ 0.53
NDE1-205ENST00000572756 ZNF697Q5TEC3 545 aa18.34■□□□□ 0.53
NDE1-205ENST00000572756 ABHD15Q6UXT9 468 aa18.34■□□□□ 0.53
NDE1-205ENST00000572756 TBCKQ8TEA7 893 aa18.34■□□□□ 0.53
NDE1-205ENST00000572756 GLG1Q92896 1179 aa18.34■□□□□ 0.53
NDE1-205ENST00000572756 ZNF577Q9BSK1 485 aa18.34■□□□□ 0.53
NDE1-205ENST00000572756 C22orf23Q9BZE7 217 aa18.34■□□□□ 0.53
NDE1-205ENST00000572756 TTYH1Q9H313 450 aaPredicted RBP18.34■□□□□ 0.53
NDE1-205ENST00000572756 ORC3Q9UBD5 711 aaPredicted RBP18.34■□□□□ 0.53
NDE1-205ENST00000572756 KCNJ14Q9UNX9 436 aa18.34■□□□□ 0.53
NDE1-205ENST00000572756 CHD9Q3L8U1 2897 aa18.34■□□□□ 0.53
NDE1-205ENST00000572756 SIP14410 1827 aa18.33■□□□□ 0.53
NDE1-205ENST00000572756 MBLAC1A4D2B0 266 aaPredicted RBP18.33■□□□□ 0.52
NDE1-205ENST00000572756 CAND2O75155 1236 aa18.33■□□□□ 0.52
NDE1-205ENST00000572756 PLPPR4Q7Z2D5 763 aa18.33■□□□□ 0.52
NDE1-205ENST00000572756 NSUN7Q8NE18 718 aaKnown RBP18.33■□□□□ 0.52
NDE1-205ENST00000572756 GUCD1Q96NT3 240 aa18.33■□□□□ 0.52
NDE1-205ENST00000572756 PBX4Q9BYU1 374 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms