RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 CUL5Q93034 780 aa11.38□□□□□ -0.59
TRAPPC1-205ENST00000572656 MAP3K14Q99558 947 aa11.38□□□□□ -0.59
TRAPPC1-205ENST00000572656 FAM50BQ9Y247 325 aa11.38□□□□□ -0.59
TRAPPC1-205ENST00000572656 TELO2Q9Y4R8 837 aa11.38□□□□□ -0.59
TRAPPC1-205ENST00000572656 KIAA1217Q5T5P2 1943 aa11.37□□□□□ -0.59
TRAPPC1-205ENST00000572656 COL4A6Q14031 1691 aa11.37□□□□□ -0.59
TRAPPC1-205ENST00000572656 C5orf67F2Z3F1 127 aa11.37□□□□□ -0.59
TRAPPC1-205ENST00000572656 MEIS2O14770 477 aa11.37□□□□□ -0.59
TRAPPC1-205ENST00000572656 NCK2O43639 380 aa11.37□□□□□ -0.59
TRAPPC1-205ENST00000572656 CHRNA1P02708 482 aa11.37□□□□□ -0.59
TRAPPC1-205ENST00000572656 RB1P06400 928 aa11.37□□□□□ -0.59
TRAPPC1-205ENST00000572656 SMARCA1P28370 1054 aa11.37□□□□□ -0.59
TRAPPC1-205ENST00000572656 SP4Q02446 784 aa11.37□□□□□ -0.59
TRAPPC1-205ENST00000572656 TTC22Q5TAA0 569 aa11.37□□□□□ -0.59
TRAPPC1-205ENST00000572656 TAF2Q6P1X5 1199 aa11.37□□□□□ -0.59
TRAPPC1-205ENST00000572656 IGDCC4Q8TDY8 1250 aa11.37□□□□□ -0.59
TRAPPC1-205ENST00000572656 RRP36Q96EU6 259 aaKnown RBP11.37□□□□□ -0.59
TRAPPC1-205ENST00000572656 SPZ1Q9BXG8 430 aa11.37□□□□□ -0.59
TRAPPC1-205ENST00000572656 EHMT1Q9H9B1 1298 aa11.37□□□□□ -0.59
TRAPPC1-205ENST00000572656 PRKAG3Q9UGI9 489 aa11.37□□□□□ -0.59
TRAPPC1-205ENST00000572656 TAF6LQ9Y6J9 622 aa11.37□□□□□ -0.59
TRAPPC1-205ENST00000572656 GHRP10912 638 aa11.36□□□□□ -0.59
TRAPPC1-205ENST00000572656 CHMLP26374 656 aa11.36□□□□□ -0.59
TRAPPC1-205ENST00000572656 PDE4AP27815 886 aa11.36□□□□□ -0.59
TRAPPC1-205ENST00000572656 KIF5BP33176 963 aa11.36□□□□□ -0.59
TRAPPC1-205ENST00000572656 CTNNB1P35222 781 aa11.36□□□□□ -0.59
TRAPPC1-205ENST00000572656 TCF7P36402 384 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC1-205ENST00000572656 BMPR1AP36894 532 aa11.36□□□□□ -0.59
TRAPPC1-205ENST00000572656 ANTXR2P58335 489 aa11.36□□□□□ -0.59
TRAPPC1-205ENST00000572656 RUFY4Q6ZNE9 571 aa11.36□□□□□ -0.59
TRAPPC1-205ENST00000572656 EP400NLQ6ZTU2 488 aa11.36□□□□□ -0.59
TRAPPC1-205ENST00000572656 RSPH3Q86UC2 560 aa11.36□□□□□ -0.59
TRAPPC1-205ENST00000572656 MB21D2Q8IYB1 491 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC1-205ENST00000572656 CTCFLQ8NI51 663 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC1-205ENST00000572656 GPRASP2Q96D09 838 aa11.36□□□□□ -0.59
TRAPPC1-205ENST00000572656 CDHR1Q96JP9 859 aa11.36□□□□□ -0.59
TRAPPC1-205ENST00000572656 LZTS2Q9BRK4 669 aa11.36□□□□□ -0.59
TRAPPC1-205ENST00000572656 C11orf84Q9BUA3 381 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC1-205ENST00000572656 LMAN2LQ9H0V9 348 aa11.36□□□□□ -0.59
TRAPPC1-205ENST00000572656 CLDND1Q9NY35 253 aa11.36□□□□□ -0.59
TRAPPC1-205ENST00000572656 SEC63Q9UGP8 760 aaKnown RBP11.36□□□□□ -0.59
TRAPPC1-205ENST00000572656 RWDD3Q9Y3V2 267 aa11.36□□□□□ -0.59
TRAPPC1-205ENST00000572656 SUPT16HQ9Y5B9 1047 aaKnown RBP11.36□□□□□ -0.59
TRAPPC1-205ENST00000572656 TRIP12Q14669 1992 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC1-205ENST00000572656 POTEB3A0JP26 581 aa11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 C19orf67A6NJJ6 358 aa11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 ENPP3O14638 875 aa11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 DCXO43602 365 aa11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 ATP9AO75110 1047 aa11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 DDAH1O94760 285 aa11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 LINC00271P0C7V0 271 aa11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 KCNA2P16389 499 aa11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 LTBRP36941 435 aa11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 ZP2Q05996 745 aa11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 MGAT3Q09327 533 aa11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 PPFIA1Q13136 1202 aa11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 LPIN1Q14693 890 aa11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 GRIK4Q16099 956 aa11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 CTC1Q2NKJ3 1217 aa11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 POTEBQ6S5H4 581 aa11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 ZNF654Q8IZM8 581 aa11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 SEPT1Q8WYJ6 367 aa11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 CLP1Q92989 425 aaKnown RBP11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 PSTPIP2Q9H939 334 aa11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 RC3H2Q9HBD1 1191 aaKnown RBP11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 LY9Q9HBG7 655 aa11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 ERAP1Q9NZ08 941 aa11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 ADGRA3Q8IWK6 1321 aa11.35□□□□□ -0.59
TRAPPC1-205ENST00000572656 GSTTP1A0A1W2PQM5 241 aa11.34□□□□□ -0.59
TRAPPC1-205ENST00000572656 MBLAC1A4D2B0 266 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC1-205ENST00000572656 GRM6O15303 877 aa11.34□□□□□ -0.59
TRAPPC1-205ENST00000572656 SGSM2O43147 1006 aa11.34□□□□□ -0.59
TRAPPC1-205ENST00000572656 ITGB5P18084 799 aa11.34□□□□□ -0.59
TRAPPC1-205ENST00000572656 GNAQP50148 359 aa11.34□□□□□ -0.59
TRAPPC1-205ENST00000572656 CSPP1Q1MSJ5 1256 aa11.34□□□□□ -0.59
TRAPPC1-205ENST00000572656 FBXO47Q5MNV8 452 aa11.34□□□□□ -0.59
TRAPPC1-205ENST00000572656 MARCH8Q5T0T0 291 aa11.34□□□□□ -0.59
TRAPPC1-205ENST00000572656 ADHFE1Q8IWW8 467 aa11.34□□□□□ -0.59
TRAPPC1-205ENST00000572656 DNAJB3Q8WWF6 145 aa11.34□□□□□ -0.59
TRAPPC1-205ENST00000572656 GLG1Q92896 1179 aa11.34□□□□□ -0.59
TRAPPC1-205ENST00000572656 MAP4K1Q92918 833 aa11.34□□□□□ -0.59
TRAPPC1-205ENST00000572656 ZNF689Q96CS4 500 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC1-205ENST00000572656 UIMC1Q96RL1 719 aa11.34□□□□□ -0.59
TRAPPC1-205ENST00000572656 MTA3Q9BTC8 594 aa11.34□□□□□ -0.59
TRAPPC1-205ENST00000572656 MYL10Q9BUA6 226 aa11.34□□□□□ -0.59
TRAPPC1-205ENST00000572656 SMARCAD1Q9H4L7 1026 aa11.34□□□□□ -0.59
TRAPPC1-205ENST00000572656 TUBE1Q9UJT0 475 aa11.34□□□□□ -0.59
TRAPPC1-205ENST00000572656 UBIAD1Q9Y5Z9 338 aa11.34□□□□□ -0.59
TRAPPC1-205ENST00000572656 SIP14410 1827 aa11.34□□□□□ -0.59
TRAPPC1-205ENST00000572656 MAFGO15525 162 aa11.33□□□□□ -0.6
TRAPPC1-205ENST00000572656 DGKIO75912 1065 aa11.33□□□□□ -0.6
TRAPPC1-205ENST00000572656 RPLP2P05387 115 aaKnown RBP11.33□□□□□ -0.6
TRAPPC1-205ENST00000572656 MARK3P27448 753 aa11.33□□□□□ -0.6
TRAPPC1-205ENST00000572656 HYAL1Q12794 435 aa11.33□□□□□ -0.6
TRAPPC1-205ENST00000572656 MTMR1Q13613 665 aa11.33□□□□□ -0.6
TRAPPC1-205ENST00000572656 BTG3Q14201 252 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC1-205ENST00000572656 SMAD2Q15796 467 aaKnown RBP11.33□□□□□ -0.6
TRAPPC1-205ENST00000572656 CASC1Q6TDU7 716 aa11.33□□□□□ -0.6
TRAPPC1-205ENST00000572656 TSHZ1Q6ZSZ6 1077 aa11.33□□□□□ -0.6
TRAPPC1-205ENST00000572656 TMTC2Q8N394 836 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms