RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 SMIM10L2AP0DMW4 78 aa11.83□□□□□ -0.52
CHMP6-203ENST00000572525 SMIM10L2BP0DMW5 78 aa11.83□□□□□ -0.52
CHMP6-203ENST00000572525 HSPD1P10809 573 aaKnown RBP11.83□□□□□ -0.52
CHMP6-203ENST00000572525 ID4P47928 161 aa11.83□□□□□ -0.52
CHMP6-203ENST00000572525 HSD17B4P51659 736 aa11.83□□□□□ -0.52
CHMP6-203ENST00000572525 UBE3AQ05086 875 aa11.83□□□□□ -0.52
CHMP6-203ENST00000572525 BTG3Q14201 252 aaPredicted RBP11.83□□□□□ -0.52
CHMP6-203ENST00000572525 USH1GQ495M9 461 aa11.83□□□□□ -0.52
CHMP6-203ENST00000572525 SPPL3Q8TCT6 385 aa11.83□□□□□ -0.52
CHMP6-203ENST00000572525 ATP8B4Q8TF62 1192 aa11.83□□□□□ -0.52
CHMP6-203ENST00000572525 SEC62Q99442 399 aaKnown RBP11.83□□□□□ -0.52
CHMP6-203ENST00000572525 CDCA3Q99618 268 aaPredicted RBP11.83□□□□□ -0.52
CHMP6-203ENST00000572525 USP26Q9BXU7 913 aa11.83□□□□□ -0.52
CHMP6-203ENST00000572525 RNPEPQ9H4A4 650 aa11.83□□□□□ -0.52
CHMP6-203ENST00000572525 IGFLR1Q9H665 355 aa11.83□□□□□ -0.52
CHMP6-203ENST00000572525 MRPL11Q9Y3B7 192 aaKnown RBP11.83□□□□□ -0.52
CHMP6-203ENST00000572525 DENND4AQ7Z401 1863 aa11.83□□□□□ -0.52
CHMP6-203ENST00000572525 DNAH14Q0VDD8 3507 aa11.82□□□□□ -0.52
CHMP6-203ENST00000572525 H0Y858 1186 aa11.82□□□□□ -0.52
CHMP6-203ENST00000572525 GGPS1O95749 300 aa11.82□□□□□ -0.52
CHMP6-203ENST00000572525 RPLP2P05387 115 aaKnown RBP11.82□□□□□ -0.52
CHMP6-203ENST00000572525 CDC37Q16543 378 aaPredicted RBP11.82□□□□□ -0.52
CHMP6-203ENST00000572525 TAF2Q6P1X5 1199 aa11.82□□□□□ -0.52
CHMP6-203ENST00000572525 STOX1Q6ZVD7 989 aa11.82□□□□□ -0.52
CHMP6-203ENST00000572525 VSIG10LQ86VR7 867 aa11.82□□□□□ -0.52
CHMP6-203ENST00000572525 TICAM2Q86XR7 235 aa11.82□□□□□ -0.52
CHMP6-203ENST00000572525 UBALD2Q8IYN6 164 aa11.82□□□□□ -0.52
CHMP6-203ENST00000572525 CRIPAKQ8N1N5 446 aa11.82□□□□□ -0.52
CHMP6-203ENST00000572525 TBC1D5Q92609 795 aa11.82□□□□□ -0.52
CHMP6-203ENST00000572525 PDCD2LQ9BRP1 358 aa11.82□□□□□ -0.52
CHMP6-203ENST00000572525 BCL11AQ9H165 835 aa11.82□□□□□ -0.52
CHMP6-203ENST00000572525 INCENPQ9NQS7 918 aa11.82□□□□□ -0.52
CHMP6-203ENST00000572525 TLR9Q9NR96 1032 aa11.82□□□□□ -0.52
CHMP6-203ENST00000572525 SQORQ9Y6N5 450 aa11.82□□□□□ -0.52
CHMP6-203ENST00000572525 BAZ2BQ9UIF8 2168 aaKnown RBP11.82□□□□□ -0.52
CHMP6-203ENST00000572525 LGALS2P05162 132 aa11.81□□□□□ -0.52
CHMP6-203ENST00000572525 ITGB1P05556 798 aa11.81□□□□□ -0.52
CHMP6-203ENST00000572525 CTSHP09668 335 aa11.81□□□□□ -0.52
CHMP6-203ENST00000572525 EIF2AK2P19525 551 aaKnown RBP11.81□□□□□ -0.52
CHMP6-203ENST00000572525 UBA1P22314 1058 aaKnown RBP11.81□□□□□ -0.52
CHMP6-203ENST00000572525 PDE12Q6L8Q7 609 aaKnown RBP11.81□□□□□ -0.52
CHMP6-203ENST00000572525 TMEM184AQ6ZMB5 413 aa11.81□□□□□ -0.52
CHMP6-203ENST00000572525 ADGRD2Q7Z7M1 963 aa11.81□□□□□ -0.52
CHMP6-203ENST00000572525 RASGRP4Q8TDF6 673 aa11.81□□□□□ -0.52
CHMP6-203ENST00000572525 NKD2Q969F2 451 aaPredicted RBP11.81□□□□□ -0.52
CHMP6-203ENST00000572525 OSBPL7Q9BZF2 842 aa11.81□□□□□ -0.52
CHMP6-203ENST00000572525 CHD6Q8TD26 2715 aa11.81□□□□□ -0.52
CHMP6-203ENST00000572525 NRCAMQ92823 1304 aa11.81□□□□□ -0.52
CHMP6-203ENST00000572525 ENPP3O14638 875 aa11.8□□□□□ -0.52
CHMP6-203ENST00000572525 SMARCA5O60264 1052 aaPredicted RBP11.8□□□□□ -0.52
CHMP6-203ENST00000572525 SRGAP2BP0DMP2 458 aa11.8□□□□□ -0.52
CHMP6-203ENST00000572525 DNAJB1P25685 340 aa11.8□□□□□ -0.52
CHMP6-203ENST00000572525 NRIP1P48552 1158 aa11.8□□□□□ -0.52
CHMP6-203ENST00000572525 ASPRV1Q53RT3 343 aa11.8□□□□□ -0.52
CHMP6-203ENST00000572525 CCDC178Q5BJE1 867 aa11.8□□□□□ -0.52
CHMP6-203ENST00000572525 DGKHQ86XP1 1220 aa11.8□□□□□ -0.52
CHMP6-203ENST00000572525 FTHL17Q9BXU8 183 aa11.8□□□□□ -0.52
CHMP6-203ENST00000572525 MLXIPQ9HAP2 919 aa11.8□□□□□ -0.52
CHMP6-203ENST00000572525 ZNF215Q9UL58 517 aaPredicted RBP11.8□□□□□ -0.52
CHMP6-203ENST00000572525 BARX2Q9UMQ3 279 aaPredicted RBP11.8□□□□□ -0.52
CHMP6-203ENST00000572525 KDM4AO75164 1064 aa11.79□□□□□ -0.52
CHMP6-203ENST00000572525 STAM2O75886 525 aa11.79□□□□□ -0.52
CHMP6-203ENST00000572525 CHRNA1P02708 482 aa11.79□□□□□ -0.52
CHMP6-203ENST00000572525 SP2Q02086 613 aa11.79□□□□□ -0.52
CHMP6-203ENST00000572525 MGAT3Q09327 533 aa11.79□□□□□ -0.52
CHMP6-203ENST00000572525 KCNC3Q14003 757 aa11.79□□□□□ -0.52
CHMP6-203ENST00000572525 METTL7BQ6UX53 244 aa11.79□□□□□ -0.52
CHMP6-203ENST00000572525 RSPH3Q86UC2 560 aa11.79□□□□□ -0.52
CHMP6-203ENST00000572525 NPAS4Q8IUM7 802 aa11.79□□□□□ -0.52
CHMP6-203ENST00000572525 ADGRF4Q8IZF3 695 aa11.79□□□□□ -0.52
CHMP6-203ENST00000572525 KLHL23Q8NBE8 558 aa11.79□□□□□ -0.52
CHMP6-203ENST00000572525 PI4K2BQ8TCG2 481 aa11.79□□□□□ -0.52
CHMP6-203ENST00000572525 POF1BQ8WVV4 589 aa11.79□□□□□ -0.52
CHMP6-203ENST00000572525 RPGRIP1Q96KN7 1286 aa11.79□□□□□ -0.52
CHMP6-203ENST00000572525 NEK1Q96PY6 1258 aa11.79□□□□□ -0.52
CHMP6-203ENST00000572525 DCTPP1Q9H773 170 aa11.79□□□□□ -0.52
CHMP6-203ENST00000572525 SORCS3Q9UPU3 1222 aa11.79□□□□□ -0.52
CHMP6-203ENST00000572525 NR2E1Q9Y466 385 aa11.79□□□□□ -0.52
CHMP6-203ENST00000572525 MRPL42Q9Y6G3 142 aaKnown RBP11.79□□□□□ -0.52
CHMP6-203ENST00000572525 EVPLQ92817 2033 aa11.79□□□□□ -0.52
CHMP6-203ENST00000572525 NOP56O00567 594 aaKnown RBP11.78□□□□□ -0.52
CHMP6-203ENST00000572525 OPLAHO14841 1288 aa11.78□□□□□ -0.52
CHMP6-203ENST00000572525 STAG3L1P0CL83 205 aa11.78□□□□□ -0.52
CHMP6-203ENST00000572525 HOXB8P17481 243 aaPredicted RBP11.78□□□□□ -0.52
CHMP6-203ENST00000572525 CLCN5P51795 746 aa11.78□□□□□ -0.52
CHMP6-203ENST00000572525 MTMR3Q13615 1198 aa11.78□□□□□ -0.52
CHMP6-203ENST00000572525 NEDD9Q14511 834 aa11.78□□□□□ -0.52
CHMP6-203ENST00000572525 LPIN1Q14693 890 aa11.78□□□□□ -0.52
CHMP6-203ENST00000572525 PGM5Q15124 567 aa11.78□□□□□ -0.52
CHMP6-203ENST00000572525 DUSP6Q16828 381 aa11.78□□□□□ -0.52
CHMP6-203ENST00000572525 QRICH1Q2TAL8 776 aa11.78□□□□□ -0.52
CHMP6-203ENST00000572525 FBXO47Q5MNV8 452 aa11.78□□□□□ -0.52
CHMP6-203ENST00000572525 TSHZ1Q6ZSZ6 1077 aa11.78□□□□□ -0.52
CHMP6-203ENST00000572525 LMBR1Q8WVP7 490 aa11.78□□□□□ -0.52
CHMP6-203ENST00000572525 SEMA4AQ9H3S1 761 aa11.78□□□□□ -0.52
CHMP6-203ENST00000572525 TLE6Q9H808 572 aa11.78□□□□□ -0.52
CHMP6-203ENST00000572525 TOMM22Q9NS69 142 aa11.78□□□□□ -0.52
CHMP6-203ENST00000572525 RNF216Q9NWF9 866 aaPredicted RBP11.78□□□□□ -0.52
CHMP6-203ENST00000572525 SPTBN2O15020 2390 aa11.78□□□□□ -0.52
CHMP6-203ENST00000572525 FRMPD4Q14CM0 1322 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms