RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 VWCEQ96DN2 955 aa22.93■■□□□ 1.26
NUP88-204ENST00000572290 AIFM3Q96NN9 605 aa22.93■■□□□ 1.26
NUP88-204ENST00000572290 RNPEPQ9H4A4 650 aa22.93■■□□□ 1.26
NUP88-204ENST00000572290 PCDHA4Q9UN74 947 aa22.93■■□□□ 1.26
NUP88-204ENST00000572290 STK36Q9NRP7 1315 aa22.92■■□□□ 1.26
NUP88-204ENST00000572290 SELPP16109 830 aa22.92■■□□□ 1.26
NUP88-204ENST00000572290 HOXC8P31273 242 aa22.92■■□□□ 1.26
NUP88-204ENST00000572290 FAM109BQ6ICB4 259 aaPredicted RBP22.92■■□□□ 1.26
NUP88-204ENST00000572290 Q7L0L9 218 aa22.92■■□□□ 1.26
NUP88-204ENST00000572290 OTOP2Q7RTS6 562 aa22.92■■□□□ 1.26
NUP88-204ENST00000572290 GLG1Q92896 1179 aa22.92■■□□□ 1.26
NUP88-204ENST00000572290 ATP6V0A1Q93050 837 aa22.92■■□□□ 1.26
NUP88-204ENST00000572290 IGLV3-22A0A075B6J6 115 aa22.91■■□□□ 1.26
NUP88-204ENST00000572290 GNAT1P11488 350 aa22.91■■□□□ 1.26
NUP88-204ENST00000572290 CKBP12277 381 aa22.91■■□□□ 1.26
NUP88-204ENST00000572290 SETQ01105 290 aaPredicted RBP22.91■■□□□ 1.26
NUP88-204ENST00000572290 ME3Q16798 604 aa22.91■■□□□ 1.26
NUP88-204ENST00000572290 TRIM71Q2Q1W2 868 aaKnown RBP22.91■■□□□ 1.26
NUP88-204ENST00000572290 LRRC8DQ7L1W4 858 aa22.91■■□□□ 1.26
NUP88-204ENST00000572290 SERINC5Q86VE9 423 aa22.91■■□□□ 1.26
NUP88-204ENST00000572290 C22orf23Q9BZE7 217 aa22.91■■□□□ 1.26
NUP88-204ENST00000572290 SMARCAD1Q9H4L7 1026 aa22.91■■□□□ 1.26
NUP88-204ENST00000572290 SETD4Q9NVD3 440 aa22.91■■□□□ 1.26
NUP88-204ENST00000572290 ERAP1Q9NZ08 941 aa22.91■■□□□ 1.26
NUP88-204ENST00000572290 CXXC1Q9P0U4 656 aaPredicted RBP22.91■■□□□ 1.26
NUP88-204ENST00000572290 SZT2Q5T011 3432 aa22.9■■□□□ 1.26
NUP88-204ENST00000572290 CIITAP33076 1130 aa22.9■■□□□ 1.26
NUP88-204ENST00000572290 ACTR2P61160 394 aa22.9■■□□□ 1.26
NUP88-204ENST00000572290 GALNT17Q6IS24 598 aa22.9■■□□□ 1.26
NUP88-204ENST00000572290 BLIDQ8IZY5 108 aa22.9■■□□□ 1.26
NUP88-204ENST00000572290 NECAB1Q8N987 351 aa22.9■■□□□ 1.26
NUP88-204ENST00000572290 DAGLBQ8NCG7 672 aa22.9■■□□□ 1.26
NUP88-204ENST00000572290 WNT8BQ93098 351 aa22.9■■□□□ 1.26
NUP88-204ENST00000572290 FTOQ9C0B1 505 aaKnown RBP eCLIP22.9■■□□□ 1.26
NUP88-204ENST00000572290 EMSYQ7Z589 1322 aa22.89■■□□□ 1.26
NUP88-204ENST00000572290 TREHO43280 583 aa22.89■■□□□ 1.25
NUP88-204ENST00000572290 LGR5O75473 907 aa22.89■■□□□ 1.25
NUP88-204ENST00000572290 PARNO95453 639 aaKnown RBP22.89■■□□□ 1.25
NUP88-204ENST00000572290 LARGE1O95461 756 aa22.89■■□□□ 1.25
NUP88-204ENST00000572290 CTDNEP1O95476 244 aa22.89■■□□□ 1.25
NUP88-204ENST00000572290 ACTN1P12814 892 aa22.89■■□□□ 1.25
NUP88-204ENST00000572290 XBP1P17861 261 aa22.89■■□□□ 1.25
NUP88-204ENST00000572290 MARK3P27448 753 aa22.89■■□□□ 1.25
NUP88-204ENST00000572290 ZNF697Q5TEC3 545 aa22.89■■□□□ 1.25
NUP88-204ENST00000572290 GTF3C6Q969F1 213 aa22.89■■□□□ 1.25
NUP88-204ENST00000572290 ZNF577Q9BSK1 485 aa22.89■■□□□ 1.25
NUP88-204ENST00000572290 AZI2Q9H6S1 392 aa22.89■■□□□ 1.25
NUP88-204ENST00000572290 NRCAMQ92823 1304 aa22.88■■□□□ 1.25
NUP88-204ENST00000572290 ZBBXA8MT70 800 aa22.88■■□□□ 1.25
NUP88-204ENST00000572290 DDX39AO00148 427 aaKnown RBP22.88■■□□□ 1.25
NUP88-204ENST00000572290 IPO5O00410 1097 aaKnown RBP22.88■■□□□ 1.25
NUP88-204ENST00000572290 DTNBO60941 627 aa22.88■■□□□ 1.25
NUP88-204ENST00000572290 USP11P51784 963 aa22.88■■□□□ 1.25
NUP88-204ENST00000572290 NPY5RQ15761 445 aa22.88■■□□□ 1.25
NUP88-204ENST00000572290 PRR16Q569H4 304 aa22.88■■□□□ 1.25
NUP88-204ENST00000572290 ZNF618Q5T7W0 954 aa22.88■■□□□ 1.25
NUP88-204ENST00000572290 TBCKQ8TEA7 893 aa22.88■■□□□ 1.25
NUP88-204ENST00000572290 PCYT2Q99447 389 aa22.88■■□□□ 1.25
NUP88-204ENST00000572290 MTMR10Q9NXD2 777 aa22.88■■□□□ 1.25
NUP88-204ENST00000572290 ORC3Q9UBD5 711 aaPredicted RBP22.88■■□□□ 1.25
NUP88-204ENST00000572290 KCNJ14Q9UNX9 436 aa22.88■■□□□ 1.25
NUP88-204ENST00000572290 M0R2N6 131 aa22.87■■□□□ 1.25
NUP88-204ENST00000572290 DHX15O43143 795 aaKnown RBP22.87■■□□□ 1.25
NUP88-204ENST00000572290 ATG7O95352 703 aa22.87■■□□□ 1.25
NUP88-204ENST00000572290 THPOP40225 353 aa22.87■■□□□ 1.25
NUP88-204ENST00000572290 PPFIA1Q13136 1202 aa22.87■■□□□ 1.25
NUP88-204ENST00000572290 LMBR1Q8WVP7 490 aa22.87■■□□□ 1.25
NUP88-204ENST00000572290 WASF1Q92558 559 aa22.87■■□□□ 1.25
NUP88-204ENST00000572290 UIMC1Q96RL1 719 aa22.87■■□□□ 1.25
NUP88-204ENST00000572290 PHF20Q9BVI0 1012 aa22.87■■□□□ 1.25
NUP88-204ENST00000572290 TBC1D22BQ9NU19 505 aa22.87■■□□□ 1.25
NUP88-204ENST00000572290 SLC4A7Q9Y6M7 1214 aa22.87■■□□□ 1.25
NUP88-204ENST00000572290 GRXCR1A8MXD5 290 aa22.86■■□□□ 1.25
NUP88-204ENST00000572290 EDIL3O43854 480 aa22.86■■□□□ 1.25
NUP88-204ENST00000572290 CCNE2O96020 404 aa22.86■■□□□ 1.25
NUP88-204ENST00000572290 STAT5BP51692 787 aa22.86■■□□□ 1.25
NUP88-204ENST00000572290 ADAM17P78536 824 aa22.86■■□□□ 1.25
NUP88-204ENST00000572290 GPNMBQ14956 572 aa22.86■■□□□ 1.25
NUP88-204ENST00000572290 TRAF7Q6Q0C0 670 aa22.86■■□□□ 1.25
NUP88-204ENST00000572290 PLPPR4Q7Z2D5 763 aa22.86■■□□□ 1.25
NUP88-204ENST00000572290 NBNO60934 754 aa22.85■■□□□ 1.25
NUP88-204ENST00000572290 CXCL10P02778 98 aa22.85■■□□□ 1.25
NUP88-204ENST00000572290 DNAJB2P25686 324 aa22.85■■□□□ 1.25
NUP88-204ENST00000572290 GRIK4Q16099 956 aa22.85■■□□□ 1.25
NUP88-204ENST00000572290 ABHD15Q6UXT9 468 aa22.85■■□□□ 1.25
NUP88-204ENST00000572290 KRT25Q7Z3Z0 450 aa22.85■■□□□ 1.25
NUP88-204ENST00000572290 TNPO1Q92973 898 aaKnown RBP22.85■■□□□ 1.25
NUP88-204ENST00000572290 LENG9Q96B70 501 aa22.85■■□□□ 1.25
NUP88-204ENST00000572290 FAM161BQ96MY7 647 aa22.85■■□□□ 1.25
NUP88-204ENST00000572290 TCEAL9Q9UHQ7 104 aa22.85■■□□□ 1.25
NUP88-204ENST00000572290 TMEM265A0A087WTH1 108 aa22.84■■□□□ 1.25
NUP88-204ENST00000572290 RSPH10B2B2RC85 870 aa22.84■■□□□ 1.25
NUP88-204ENST00000572290 CAND2O75155 1236 aa22.84■■□□□ 1.25
NUP88-204ENST00000572290 RSPH10BP0C881 870 aa22.84■■□□□ 1.25
NUP88-204ENST00000572290 FDPSP14324 419 aaKnown RBP22.84■■□□□ 1.25
NUP88-204ENST00000572290 NONOQ15233 471 aaKnown RBP eCLIP22.84■■□□□ 1.25
NUP88-204ENST00000572290 MIS18BP1Q6P0N0 1132 aa22.84■■□□□ 1.25
NUP88-204ENST00000572290 NSUN7Q8NE18 718 aaKnown RBP22.84■■□□□ 1.25
NUP88-204ENST00000572290 PBX4Q9BYU1 374 aa22.84■■□□□ 1.25
NUP88-204ENST00000572290 SEMA6BQ9H3T3 888 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms