RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 CYP21A2P08686 494 aa22.18■■□□□ 1.14
NUP88-203ENST00000572019 GHRP10912 638 aa22.18■■□□□ 1.14
NUP88-203ENST00000572019 CLUL1Q15846 466 aa22.18■■□□□ 1.14
NUP88-203ENST00000572019 POTEBQ6S5H4 581 aa22.18■■□□□ 1.14
NUP88-203ENST00000572019 RPAINQ86UA6 219 aa22.18■■□□□ 1.14
NUP88-203ENST00000572019 ZBTB10Q96DT7 871 aa22.18■■□□□ 1.14
NUP88-203ENST00000572019 USP26Q9BXU7 913 aa22.18■■□□□ 1.14
NUP88-203ENST00000572019 RC3H2Q9HBD1 1191 aaKnown RBP22.18■■□□□ 1.14
NUP88-203ENST00000572019 TRIOO75962 3097 aa22.18■■□□□ 1.14
NUP88-203ENST00000572019 TECTAO75443 2155 aa22.17■■□□□ 1.14
NUP88-203ENST00000572019 HIP1O00291 1037 aa22.17■■□□□ 1.14
NUP88-203ENST00000572019 CAND2O75155 1236 aa22.17■■□□□ 1.14
NUP88-203ENST00000572019 GSPT1P15170 499 aaKnown RBP22.17■■□□□ 1.14
NUP88-203ENST00000572019 CTNNB1P35222 781 aa22.17■■□□□ 1.14
NUP88-203ENST00000572019 USP17L6PQ6QN14 398 aa22.17■■□□□ 1.14
NUP88-203ENST00000572019 RWDD1Q9H446 243 aaPredicted RBP22.17■■□□□ 1.14
NUP88-203ENST00000572019 C19orf67A6NJJ6 358 aa22.16■■□□□ 1.14
NUP88-203ENST00000572019 IFIT3O14879 490 aaKnown RBP22.16■■□□□ 1.14
NUP88-203ENST00000572019 FIBPO43427 364 aa22.16■■□□□ 1.14
NUP88-203ENST00000572019 DCXO43602 365 aa22.16■■□□□ 1.14
NUP88-203ENST00000572019 ANTXR2P58335 489 aa22.16■■□□□ 1.14
NUP88-203ENST00000572019 MGAT3Q09327 533 aa22.16■■□□□ 1.14
NUP88-203ENST00000572019 HYAL1Q12794 435 aa22.16■■□□□ 1.14
NUP88-203ENST00000572019 NEDD9Q14511 834 aa22.16■■□□□ 1.14
NUP88-203ENST00000572019 IL17RAQ96F46 866 aa22.16■■□□□ 1.14
NUP88-203ENST00000572019 EHMT1Q9H9B1 1298 aa22.16■■□□□ 1.14
NUP88-203ENST00000572019 LINC01565O15544 149 aa22.15■■□□□ 1.14
NUP88-203ENST00000572019 ATP9AO75110 1047 aa22.15■■□□□ 1.14
NUP88-203ENST00000572019 ALADP13716 330 aa22.15■■□□□ 1.14
NUP88-203ENST00000572019 PDE4AP27815 886 aa22.15■■□□□ 1.14
NUP88-203ENST00000572019 IRS1P35568 1242 aa22.15■■□□□ 1.14
NUP88-203ENST00000572019 COL9A3Q14050 684 aaPredicted RBP22.15■■□□□ 1.14
NUP88-203ENST00000572019 LPIN1Q14693 890 aa22.15■■□□□ 1.14
NUP88-203ENST00000572019 CTC1Q2NKJ3 1217 aa22.15■■□□□ 1.14
NUP88-203ENST00000572019 PUS10Q3MIT2 529 aaKnown RBP22.15■■□□□ 1.14
NUP88-203ENST00000572019 GNPTABQ3T906 1256 aa22.15■■□□□ 1.14
NUP88-203ENST00000572019 FIBCD1Q8N539 461 aa22.15■■□□□ 1.14
NUP88-203ENST00000572019 LINC01599Q8WXQ3 324 aa22.15■■□□□ 1.14
NUP88-203ENST00000572019 MYL10Q9BUA6 226 aa22.15■■□□□ 1.14
NUP88-203ENST00000572019 PLXNA4Q9HCM2 1894 aa22.14■■□□□ 1.13
NUP88-203ENST00000572019 C5orf67F2Z3F1 127 aa22.14■■□□□ 1.13
NUP88-203ENST00000572019 MEIS2O14770 477 aa22.14■■□□□ 1.13
NUP88-203ENST00000572019 TBX10O75333 385 aa22.14■■□□□ 1.13
NUP88-203ENST00000572019 CAMK1Q14012 370 aa22.14■■□□□ 1.13
NUP88-203ENST00000572019 EXOC6Q8TAG9 804 aa22.14■■□□□ 1.13
NUP88-203ENST00000572019 APBB2Q92870 758 aa22.14■■□□□ 1.13
NUP88-203ENST00000572019 ADGRA3Q8IWK6 1321 aa22.13■■□□□ 1.13
NUP88-203ENST00000572019 GNAT1P11488 350 aa22.13■■□□□ 1.13
NUP88-203ENST00000572019 MARK3P27448 753 aa22.13■■□□□ 1.13
NUP88-203ENST00000572019 BMPR1AP36894 532 aa22.13■■□□□ 1.13
NUP88-203ENST00000572019 PCNX4Q63HM2 1172 aa22.13■■□□□ 1.13
NUP88-203ENST00000572019 ADHFE1Q8IWW8 467 aa22.13■■□□□ 1.13
NUP88-203ENST00000572019 AGO3Q9H9G7 860 aaKnown RBP22.13■■□□□ 1.13
NUP88-203ENST00000572019 GSTTP1A0A1W2PQM5 241 aa22.12■■□□□ 1.13
NUP88-203ENST00000572019 E7EWF7 191 aa22.12■■□□□ 1.13
NUP88-203ENST00000572019 ENPP3O14638 875 aa22.12■■□□□ 1.13
NUP88-203ENST00000572019 STAM2O75886 525 aa22.12■■□□□ 1.13
NUP88-203ENST00000572019 KCNA2P16389 499 aa22.12■■□□□ 1.13
NUP88-203ENST00000572019 TCF7P36402 384 aaPredicted RBP22.12■■□□□ 1.13
NUP88-203ENST00000572019 WTAPQ15007 396 aa22.12■■□□□ 1.13
NUP88-203ENST00000572019 MARCH8Q5T0T0 291 aa22.12■■□□□ 1.13
NUP88-203ENST00000572019 HFE2Q6ZVN8 426 aa22.12■■□□□ 1.13
NUP88-203ENST00000572019 DNAJB3Q8WWF6 145 aa22.12■■□□□ 1.13
NUP88-203ENST00000572019 FBXL18Q96ME1 805 aa22.12■■□□□ 1.13
NUP88-203ENST00000572019 PKD2L1Q9P0L9 805 aa22.12■■□□□ 1.13
NUP88-203ENST00000572019 ZNF215Q9UL58 517 aaPredicted RBP22.12■■□□□ 1.13
NUP88-203ENST00000572019 NRCAMQ92823 1304 aa22.11■■□□□ 1.13
NUP88-203ENST00000572019 MBTPS2O43462 519 aa22.11■■□□□ 1.13
NUP88-203ENST00000572019 DNAJB1P25685 340 aa22.11■■□□□ 1.13
NUP88-203ENST00000572019 CMTR1Q8N1G2 835 aaKnown RBP22.11■■□□□ 1.13
NUP88-203ENST00000572019 IGDCC4Q8TDY8 1250 aa22.11■■□□□ 1.13
NUP88-203ENST00000572019 CLP1Q92989 425 aaKnown RBP22.11■■□□□ 1.13
NUP88-203ENST00000572019 ZNF689Q96CS4 500 aaPredicted RBP22.11■■□□□ 1.13
NUP88-203ENST00000572019 ALG13Q9NP73 1137 aaKnown RBP22.11■■□□□ 1.13
NUP88-203ENST00000572019 MUTYHQ9UIF7 546 aa22.11■■□□□ 1.13
NUP88-203ENST00000572019 ITGB5P18084 799 aa22.1■■□□□ 1.13
NUP88-203ENST00000572019 NHLH1Q02575 133 aa22.1■■□□□ 1.13
NUP88-203ENST00000572019 TRDNQ13061 729 aa22.1■■□□□ 1.13
NUP88-203ENST00000572019 PPFIA1Q13136 1202 aa22.1■■□□□ 1.13
NUP88-203ENST00000572019 SMAD2Q15796 467 aaKnown RBP22.1■■□□□ 1.13
NUP88-203ENST00000572019 GRIK4Q16099 956 aa22.1■■□□□ 1.13
NUP88-203ENST00000572019 CSPP1Q1MSJ5 1256 aa22.1■■□□□ 1.13
NUP88-203ENST00000572019 FBXO47Q5MNV8 452 aa22.1■■□□□ 1.13
NUP88-203ENST00000572019 RTN4RL1Q86UN2 441 aaPredicted RBP22.1■■□□□ 1.13
NUP88-203ENST00000572019 SMARCC2Q8TAQ2 1214 aa22.1■■□□□ 1.13
NUP88-203ENST00000572019 SENP7Q9BQF6 1050 aa22.1■■□□□ 1.13
NUP88-203ENST00000572019 IGFLR1Q9H665 355 aa22.1■■□□□ 1.13
NUP88-203ENST00000572019 PRKAG3Q9UGI9 489 aa22.1■■□□□ 1.13
NUP88-203ENST00000572019 CDY2AQ9Y6F7 541 aa22.1■■□□□ 1.13
NUP88-203ENST00000572019 PLEKHA8P1O95397 391 aa22.09■■□□□ 1.13
NUP88-203ENST00000572019 RB1P06400 928 aa22.09■■□□□ 1.13
NUP88-203ENST00000572019 MRE11P49959 708 aa22.09■■□□□ 1.13
NUP88-203ENST00000572019 TRAF1Q13077 416 aa22.09■■□□□ 1.13
NUP88-203ENST00000572019 ADGRD2Q7Z7M1 963 aa22.09■■□□□ 1.13
NUP88-203ENST00000572019 MB21D2Q8IYB1 491 aaPredicted RBP22.09■■□□□ 1.13
NUP88-203ENST00000572019 C11orf84Q9BUA3 381 aaPredicted RBP22.09■■□□□ 1.13
NUP88-203ENST00000572019 TUBE1Q9UJT0 475 aa22.09■■□□□ 1.13
NUP88-203ENST00000572019 MRPL42Q9Y6G3 142 aaKnown RBP22.09■■□□□ 1.13
NUP88-203ENST00000572019 MBLAC1A4D2B0 266 aaPredicted RBP22.08■■□□□ 1.13
NUP88-203ENST00000572019 PIK3CDO00329 1044 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms