RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 EHMT1Q9H9B1 1298 aa15.74■□□□□ 0.11
RAB40B-204ENST00000571554 JADE2Q9NQC1 790 aa15.74■□□□□ 0.11
RAB40B-204ENST00000571554 PRDM6Q9NQX0 595 aa15.74■□□□□ 0.11
RAB40B-204ENST00000571554 BARHL2Q9NY43 387 aa15.74■□□□□ 0.11
RAB40B-204ENST00000571554 ZNF215Q9UL58 517 aaPredicted RBP15.74■□□□□ 0.11
RAB40B-204ENST00000571554 BAIAP3O94812 1187 aa15.73■□□□□ 0.11
RAB40B-204ENST00000571554 CXCL10P02778 98 aa15.73■□□□□ 0.11
RAB40B-204ENST00000571554 ARP10275 920 aa15.73■□□□□ 0.11
RAB40B-204ENST00000571554 HOXC8P31273 242 aa15.73■□□□□ 0.11
RAB40B-204ENST00000571554 CCT2P78371 535 aaKnown RBP15.73■□□□□ 0.11
RAB40B-204ENST00000571554 JAKMIP3Q5VZ66 844 aa15.73■□□□□ 0.11
RAB40B-204ENST00000571554 FAM117BQ6P1L5 589 aa15.73■□□□□ 0.11
RAB40B-204ENST00000571554 SPRED2Q7Z698 418 aa15.73■□□□□ 0.11
RAB40B-204ENST00000571554 MICALL1Q8N3F8 863 aa15.73■□□□□ 0.11
RAB40B-204ENST00000571554 GIMAP8Q8ND71 665 aaPredicted RBP15.73■□□□□ 0.11
RAB40B-204ENST00000571554 LMBR1Q8WVP7 490 aa15.73■□□□□ 0.11
RAB40B-204ENST00000571554 CDHR1Q96JP9 859 aa15.73■□□□□ 0.11
RAB40B-204ENST00000571554 LARP6Q9BRS8 491 aaKnown RBP15.73■□□□□ 0.11
RAB40B-204ENST00000571554 NCOA5Q9HCD5 579 aaKnown RBP15.73■□□□□ 0.11
RAB40B-204ENST00000571554 KAT6AQ92794 2004 aa15.73■□□□□ 0.11
RAB40B-204ENST00000571554 LCHNA4D1U4 455 aa15.72■□□□□ 0.11
RAB40B-204ENST00000571554 RSPH10B2B2RC85 870 aa15.72■□□□□ 0.11
RAB40B-204ENST00000571554 TLL1O43897 1013 aa15.72■□□□□ 0.11
RAB40B-204ENST00000571554 RSPH10BP0C881 870 aa15.72■□□□□ 0.11
RAB40B-204ENST00000571554 SCG2P13521 617 aa15.72■□□□□ 0.11
RAB40B-204ENST00000571554 PFKFB3Q16875 520 aaPredicted RBP15.72■□□□□ 0.11
RAB40B-204ENST00000571554 SEPT1Q8WYJ6 367 aa15.72■□□□□ 0.11
RAB40B-204ENST00000571554 GLG1Q92896 1179 aa15.72■□□□□ 0.11
RAB40B-204ENST00000571554 ZBTB10Q96DT7 871 aa15.72■□□□□ 0.11
RAB40B-204ENST00000571554 MXRA8Q9BRK3 442 aa15.72■□□□□ 0.11
RAB40B-204ENST00000571554 KCNH7Q9NS40 1196 aa15.72■□□□□ 0.11
RAB40B-204ENST00000571554 EPOPA6NHQ4 379 aa15.71■□□□□ 0.11
RAB40B-204ENST00000571554 hCG_1984214I3L0E3 225 aa15.71■□□□□ 0.11
RAB40B-204ENST00000571554 DDX39AO00148 427 aaKnown RBP15.71■□□□□ 0.11
RAB40B-204ENST00000571554 LGR5O75473 907 aa15.71■□□□□ 0.11
RAB40B-204ENST00000571554 PARNO95453 639 aaKnown RBP15.71■□□□□ 0.11
RAB40B-204ENST00000571554 PSMA5P28066 241 aa15.71■□□□□ 0.11
RAB40B-204ENST00000571554 CLK2P49760 499 aaKnown RBP15.71■□□□□ 0.11
RAB40B-204ENST00000571554 RCAN1P53805 252 aa15.71■□□□□ 0.11
RAB40B-204ENST00000571554 IGBP1P78318 339 aa15.71■□□□□ 0.11
RAB40B-204ENST00000571554 PKN1Q16512 942 aa15.71■□□□□ 0.11
RAB40B-204ENST00000571554 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.71■□□□□ 0.11
RAB40B-204ENST00000571554 RUFY4Q6ZNE9 571 aa15.71■□□□□ 0.11
RAB40B-204ENST00000571554 ZNF713Q8N859 430 aaPredicted RBP15.71■□□□□ 0.11
RAB40B-204ENST00000571554 DBF4BQ8NFT6 615 aa15.71■□□□□ 0.11
RAB40B-204ENST00000571554 PHOSPHO2Q8TCD6 241 aa15.71■□□□□ 0.11
RAB40B-204ENST00000571554 ARNTL2Q8WYA1 636 aa15.71■□□□□ 0.11
RAB40B-204ENST00000571554 ZBED2Q9BTP6 218 aa15.71■□□□□ 0.11
RAB40B-204ENST00000571554 COL25A1Q9BXS0 654 aaPredicted RBP15.71■□□□□ 0.11
RAB40B-204ENST00000571554 JPH1Q9HDC5 661 aaPredicted RBP15.71■□□□□ 0.11
RAB40B-204ENST00000571554 MICAL3Q7RTP6 2002 aa15.7■□□□□ 0.1
RAB40B-204ENST00000571554 CCDC196A0A1B0GTZ2 297 aa15.7■□□□□ 0.1
RAB40B-204ENST00000571554 FOSP01100 380 aaPredicted RBP15.7■□□□□ 0.1
RAB40B-204ENST00000571554 GNAT1P11488 350 aa15.7■□□□□ 0.1
RAB40B-204ENST00000571554 ZNF76P36508 570 aa15.7■□□□□ 0.1
RAB40B-204ENST00000571554 TAP1Q03518 808 aa15.7■□□□□ 0.1
RAB40B-204ENST00000571554 PPFIA1Q13136 1202 aa15.7■□□□□ 0.1
RAB40B-204ENST00000571554 ITGB3BPQ13352 177 aaPredicted RBP15.7■□□□□ 0.1
RAB40B-204ENST00000571554 TOB2Q14106 344 aaPredicted RBP15.7■□□□□ 0.1
RAB40B-204ENST00000571554 IKBKEQ14164 716 aa15.7■□□□□ 0.1
RAB40B-204ENST00000571554 CEP55Q53EZ4 464 aa15.7■□□□□ 0.1
RAB40B-204ENST00000571554 RASGRP4Q8TDF6 673 aa15.7■□□□□ 0.1
RAB40B-204ENST00000571554 PCYT2Q99447 389 aa15.7■□□□□ 0.1
RAB40B-204ENST00000571554 SLC26A6Q9BXS9 759 aa15.7■□□□□ 0.1
RAB40B-204ENST00000571554 UPF3BQ9BZI7 483 aaKnown RBP15.7■□□□□ 0.1
RAB40B-204ENST00000571554 AGO4Q9HCK5 861 aaKnown RBP15.7■□□□□ 0.1
RAB40B-204ENST00000571554 SLC9A2Q9UBY0 812 aa15.7■□□□□ 0.1
RAB40B-204ENST00000571554 SIP14410 1827 aa15.7■□□□□ 0.1
RAB40B-204ENST00000571554 ABHD14A-ACY1A0A1B0GW23 586 aa15.69■□□□□ 0.1
RAB40B-204ENST00000571554 KIF28PB7ZC32 967 aa15.69■□□□□ 0.1
RAB40B-204ENST00000571554 PDIA3P30101 505 aaKnown RBP15.69■□□□□ 0.1
RAB40B-204ENST00000571554 SREBF1P36956 1147 aa15.69■□□□□ 0.1
RAB40B-204ENST00000571554 ADAM17P78536 824 aa15.69■□□□□ 0.1
RAB40B-204ENST00000571554 AP3B2Q13367 1082 aa15.69■□□□□ 0.1
RAB40B-204ENST00000571554 GRIK4Q16099 956 aa15.69■□□□□ 0.1
RAB40B-204ENST00000571554 KRT40Q6A162 431 aa15.69■□□□□ 0.1
RAB40B-204ENST00000571554 RUFY3Q7L099 469 aa15.69■□□□□ 0.1
RAB40B-204ENST00000571554 SDF4Q9BRK5 362 aa15.69■□□□□ 0.1
RAB40B-204ENST00000571554 AGXT2Q9BYV1 514 aa15.69■□□□□ 0.1
RAB40B-204ENST00000571554 ERAP1Q9NZ08 941 aa15.69■□□□□ 0.1
RAB40B-204ENST00000571554 MTUS1Q9ULD2 1270 aa15.69■□□□□ 0.1
RAB40B-204ENST00000571554 NID2Q14112 1375 aa15.69■□□□□ 0.1
RAB40B-204ENST00000571554 COL4A4P53420 1690 aaPredicted RBP15.69■□□□□ 0.1
RAB40B-204ENST00000571554 EMSYQ7Z589 1322 aa15.68■□□□□ 0.1
RAB40B-204ENST00000571554 NRCAMQ92823 1304 aa15.68■□□□□ 0.1
RAB40B-204ENST00000571554 REV3LO60673 3130 aa15.68■□□□□ 0.1
RAB40B-204ENST00000571554 FAM86B1E9PN63 330 aa15.68■□□□□ 0.1
RAB40B-204ENST00000571554 MAFGO15525 162 aa15.68■□□□□ 0.1
RAB40B-204ENST00000571554 PRPF3O43395 683 aaKnown RBP15.68■□□□□ 0.1
RAB40B-204ENST00000571554 FAM86B2P0C5J1 330 aa15.68■□□□□ 0.1
RAB40B-204ENST00000571554 ACTR2P61160 394 aa15.68■□□□□ 0.1
RAB40B-204ENST00000571554 AKAP17AQ02040 695 aaKnown RBP15.68■□□□□ 0.1
RAB40B-204ENST00000571554 STK3Q13188 491 aa15.68■□□□□ 0.1
RAB40B-204ENST00000571554 NTRK3Q16288 839 aa15.68■□□□□ 0.1
RAB40B-204ENST00000571554 PLEKHG4Q58EX7 1191 aa15.68■□□□□ 0.1
RAB40B-204ENST00000571554 MYOCDQ8IZQ8 938 aa15.68■□□□□ 0.1
RAB40B-204ENST00000571554 TRAPPC12Q8WVT3 735 aa15.68■□□□□ 0.1
RAB40B-204ENST00000571554 SMARCAD1Q9H4L7 1026 aa15.68■□□□□ 0.1
RAB40B-204ENST00000571554 ZSWIM6Q9HCJ5 1215 aa15.68■□□□□ 0.1
RAB40B-204ENST00000571554 VPS54Q9P1Q0 977 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms