RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 SREBF1P36956 1147 aa34.65■■■■□ 3.14
CTDNEP1-206ENST00000571409 CCT2P78371 535 aaKnown RBP34.65■■■■□ 3.14
CTDNEP1-206ENST00000571409 AKAP17AQ02040 695 aaKnown RBP34.65■■■■□ 3.14
CTDNEP1-206ENST00000571409 JAKMIP3Q5VZ66 844 aa34.65■■■■□ 3.14
CTDNEP1-206ENST00000571409 MAFAQ8NHW3 353 aaPredicted RBP34.65■■■■□ 3.14
CTDNEP1-206ENST00000571409 CCDC12Q8WUD4 166 aaPredicted RBP34.65■■■■□ 3.14
CTDNEP1-206ENST00000571409 NCOA5Q9HCD5 579 aaKnown RBP34.65■■■■□ 3.14
CTDNEP1-206ENST00000571409 ESYT2A0FGR8 921 aa34.64■■■■□ 3.14
CTDNEP1-206ENST00000571409 PPFIA3O75145 1194 aa34.64■■■■□ 3.14
CTDNEP1-206ENST00000571409 GNAT1P11488 350 aa34.64■■■■□ 3.14
CTDNEP1-206ENST00000571409 MYOGP15173 224 aa34.64■■■■□ 3.14
CTDNEP1-206ENST00000571409 THPOP40225 353 aa34.64■■■■□ 3.14
CTDNEP1-206ENST00000571409 CEP55Q53EZ4 464 aa34.64■■■■□ 3.14
CTDNEP1-206ENST00000571409 RNF26Q9BY78 433 aaPredicted RBP34.64■■■■□ 3.14
CTDNEP1-206ENST00000571409 TM6SF1Q9BZW5 370 aa34.64■■■■□ 3.14
CTDNEP1-206ENST00000571409 ZMYND12Q9H0C1 365 aa34.64■■■■□ 3.14
CTDNEP1-206ENST00000571409 CNKSR3Q6P9H4 555 aa34.63■■■■□ 3.13
CTDNEP1-206ENST00000571409 PHOSPHO2Q8TCD6 241 aa34.63■■■■□ 3.13
CTDNEP1-206ENST00000571409 SLC26A6Q9BXS9 759 aa34.63■■■■□ 3.13
CTDNEP1-206ENST00000571409 UPF3BQ9BZI7 483 aaKnown RBP34.63■■■■□ 3.13
CTDNEP1-206ENST00000571409 C6orf50Q9HD87 102 aa34.63■■■■□ 3.13
CTDNEP1-206ENST00000571409 JPH1Q9HDC5 661 aaPredicted RBP34.63■■■■□ 3.13
CTDNEP1-206ENST00000571409 ARP10275 920 aa34.62■■■■□ 3.13
CTDNEP1-206ENST00000571409 IFNAR1P17181 557 aa34.62■■■■□ 3.13
CTDNEP1-206ENST00000571409 KCNJ6P48051 423 aa34.62■■■■□ 3.13
CTDNEP1-206ENST00000571409 ARHGAP4P98171 946 aa34.62■■■■□ 3.13
CTDNEP1-206ENST00000571409 MBTPS1Q14703 1052 aa34.62■■■■□ 3.13
CTDNEP1-206ENST00000571409 SLC9A2Q9UBY0 812 aa34.62■■■■□ 3.13
CTDNEP1-206ENST00000571409 ZNF76P36508 570 aa34.61■■■■□ 3.13
CTDNEP1-206ENST00000571409 PPP2R2DQ66LE6 453 aa34.61■■■■□ 3.13
CTDNEP1-206ENST00000571409 LMBR1Q8WVP7 490 aa34.61■■■■□ 3.13
CTDNEP1-206ENST00000571409 SDF4Q9BRK5 362 aa34.61■■■■□ 3.13
CTDNEP1-206ENST00000571409 PRDM12Q9H4Q4 367 aa34.61■■■■□ 3.13
CTDNEP1-206ENST00000571409 RSPH10B2B2RC85 870 aa34.6■■■■□ 3.13
CTDNEP1-206ENST00000571409 ADAMTS3O15072 1205 aa34.6■■■■□ 3.13
CTDNEP1-206ENST00000571409 CENPBP07199 599 aaPredicted RBP34.6■■■■□ 3.13
CTDNEP1-206ENST00000571409 RSPH10BP0C881 870 aa34.6■■■■□ 3.13
CTDNEP1-206ENST00000571409 MARK3P27448 753 aa34.6■■■■□ 3.13
CTDNEP1-206ENST00000571409 ADAM17P78536 824 aa34.6■■■■□ 3.13
CTDNEP1-206ENST00000571409 GLG1Q92896 1179 aa34.6■■■■□ 3.13
CTDNEP1-206ENST00000571409 ERAP1Q9NZ08 941 aa34.6■■■■□ 3.13
CTDNEP1-206ENST00000571409 NFASCO94856 1347 aa34.59■■■■□ 3.13
CTDNEP1-206ENST00000571409 NRCAMQ92823 1304 aa34.59■■■■□ 3.13
CTDNEP1-206ENST00000571409 RBAK-RBAKDNI3L0D1 243 aa34.59■■■■□ 3.13
CTDNEP1-206ENST00000571409 MEIS1O00470 390 aa34.59■■■■□ 3.13
CTDNEP1-206ENST00000571409 GNA11P29992 359 aa34.59■■■■□ 3.13
CTDNEP1-206ENST00000571409 WDR5P61964 334 aaKnown RBP34.59■■■■□ 3.13
CTDNEP1-206ENST00000571409 TCTN1Q2MV58 587 aa34.59■■■■□ 3.13
CTDNEP1-206ENST00000571409 HERC6Q8IVU3 1022 aa34.59■■■■□ 3.13
CTDNEP1-206ENST00000571409 REXO1Q8N1G1 1221 aaKnown RBP34.59■■■■□ 3.13
CTDNEP1-206ENST00000571409 GAS2L1Q99501 681 aaPredicted RBP34.59■■■■□ 3.13
CTDNEP1-206ENST00000571409 LARP6Q9BRS8 491 aaKnown RBP34.59■■■■□ 3.13
CTDNEP1-206ENST00000571409 SMARCAD1Q9H4L7 1026 aa34.59■■■■□ 3.13
CTDNEP1-206ENST00000571409 AGO4Q9HCK5 861 aaKnown RBP34.59■■■■□ 3.13
CTDNEP1-206ENST00000571409 PTPRSQ13332 1948 aa34.59■■■■□ 3.13
CTDNEP1-206ENST00000571409 EMSYQ7Z589 1322 aa34.58■■■■□ 3.13
CTDNEP1-206ENST00000571409 MCTP2Q6DN12 878 aa34.58■■■■□ 3.13
CTDNEP1-206ENST00000571409 CAND2O75155 1236 aa34.57■■■■□ 3.12
CTDNEP1-206ENST00000571409 CA3P07451 260 aa34.57■■■■□ 3.12
CTDNEP1-206ENST00000571409 ITGB3BPQ13352 177 aaPredicted RBP34.57■■■■□ 3.12
CTDNEP1-206ENST00000571409 NIPA1Q7RTP0 329 aa34.57■■■■□ 3.12
CTDNEP1-206ENST00000571409 CCDC148Q8NFR7 591 aa34.57■■■■□ 3.12
CTDNEP1-206ENST00000571409 CRYGNQ8WXF5 182 aa34.57■■■■□ 3.12
CTDNEP1-206ENST00000571409 ZNF274Q96GC6 653 aaPredicted RBP34.57■■■■□ 3.12
CTDNEP1-206ENST00000571409 PDRG1Q9NUG6 133 aa34.57■■■■□ 3.12
CTDNEP1-206ENST00000571409 CHD9Q3L8U1 2897 aa34.56■■■■□ 3.12
CTDNEP1-206ENST00000571409 KAT6AQ92794 2004 aa34.56■■■■□ 3.12
CTDNEP1-206ENST00000571409 ABHD14A-ACY1A0A1B0GW23 586 aa34.56■■■■□ 3.12
CTDNEP1-206ENST00000571409 FAM86B1E9PN63 330 aa34.56■■■■□ 3.12
CTDNEP1-206ENST00000571409 LGR5O75473 907 aa34.56■■■■□ 3.12
CTDNEP1-206ENST00000571409 CTSHP09668 335 aa34.56■■■■□ 3.12
CTDNEP1-206ENST00000571409 FAM86B2P0C5J1 330 aa34.56■■■■□ 3.12
CTDNEP1-206ENST00000571409 PPFIA1Q13136 1202 aa34.56■■■■□ 3.12
CTDNEP1-206ENST00000571409 IKBKEQ14164 716 aa34.56■■■■□ 3.12
CTDNEP1-206ENST00000571409 PLA2G4DQ86XP0 818 aa34.56■■■■□ 3.12
CTDNEP1-206ENST00000571409 PCYT2Q99447 389 aa34.56■■■■□ 3.12
CTDNEP1-206ENST00000571409 VPS54Q9P1Q0 977 aa34.56■■■■□ 3.12
CTDNEP1-206ENST00000571409 KIF28PB7ZC32 967 aa34.55■■■■□ 3.12
CTDNEP1-206ENST00000571409 CYP3A4P08684 503 aa34.55■■■■□ 3.12
CTDNEP1-206ENST00000571409 ACTR2P61160 394 aa34.55■■■■□ 3.12
CTDNEP1-206ENST00000571409 DEFB103AP81534 67 aa34.55■■■■□ 3.12
CTDNEP1-206ENST00000571409 BICD2Q8TD16 824 aa34.55■■■■□ 3.12
CTDNEP1-206ENST00000571409 AZI2Q9H6S1 392 aa34.55■■■■□ 3.12
CTDNEP1-206ENST00000571409 STK3Q13188 491 aa34.54■■■■□ 3.12
CTDNEP1-206ENST00000571409 GRIK4Q16099 956 aa34.54■■■■□ 3.12
CTDNEP1-206ENST00000571409 TRIM22Q8IYM9 498 aa34.54■■■■□ 3.12
CTDNEP1-206ENST00000571409 RASGRP4Q8TDF6 673 aa34.54■■■■□ 3.12
CTDNEP1-206ENST00000571409 EYSQ5T1H1 3165 aa34.54■■■■□ 3.12
CTDNEP1-206ENST00000571409 CPLX1O14810 134 aa34.53■■■■□ 3.12
CTDNEP1-206ENST00000571409 EFCAB14O75071 495 aa34.53■■■■□ 3.12
CTDNEP1-206ENST00000571409 SSRP1Q08945 709 aaKnown RBP34.53■■■■□ 3.12
CTDNEP1-206ENST00000571409 TMCO2Q7Z6W1 182 aaPredicted RBP34.53■■■■□ 3.12
CTDNEP1-206ENST00000571409 PHF6Q8IWS0 365 aaKnown RBP eCLIP34.53■■■■□ 3.12
CTDNEP1-206ENST00000571409 DBF4BQ8NFT6 615 aa34.53■■■■□ 3.12
CTDNEP1-206ENST00000571409 IGLV3-22A0A075B6J6 115 aa34.52■■■■□ 3.12
CTDNEP1-206ENST00000571409 DDX39AO00148 427 aaKnown RBP34.52■■■■□ 3.12
CTDNEP1-206ENST00000571409 SH3GLB2Q9NR46 395 aa34.52■■■■□ 3.12
CTDNEP1-206ENST00000571409 TLL1O43897 1013 aa34.51■■■■□ 3.12
CTDNEP1-206ENST00000571409 ADGRE1Q14246 886 aa34.51■■■■□ 3.12
CTDNEP1-206ENST00000571409 PLEKHG4Q58EX7 1191 aa34.51■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms