RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 CCDC69A6NI79 296 aa20.19■□□□□ 0.82
CIITA-206ENST00000571190 CHRNA1P02708 482 aa20.19■□□□□ 0.82
CIITA-206ENST00000571190 TCF7P36402 384 aaPredicted RBP20.19■□□□□ 0.82
CIITA-206ENST00000571190 ARHGAP4P98171 946 aa20.19■□□□□ 0.82
CIITA-206ENST00000571190 UBE2SQ16763 222 aa20.19■□□□□ 0.82
CIITA-206ENST00000571190 CREB3L3Q68CJ9 461 aa20.19■□□□□ 0.82
CIITA-206ENST00000571190 RUFY4Q6ZNE9 571 aa20.19■□□□□ 0.82
CIITA-206ENST00000571190 FBXO22Q8NEZ5 403 aa20.19■□□□□ 0.82
CIITA-206ENST00000571190 LRRC2Q9BYS8 371 aa20.19■□□□□ 0.82
CIITA-206ENST00000571190 RPAINQ86UA6 219 aa20.18■□□□□ 0.82
CIITA-206ENST00000571190 CCDC82Q8N4S0 544 aa20.18■□□□□ 0.82
CIITA-206ENST00000571190 EPHX3Q9H6B9 360 aa20.18■□□□□ 0.82
CIITA-206ENST00000571190 NRCAMQ92823 1304 aa20.18■□□□□ 0.82
CIITA-206ENST00000571190 TRIP12Q14669 1992 aaPredicted RBP20.17■□□□□ 0.82
CIITA-206ENST00000571190 UPP2O95045 317 aa20.17■□□□□ 0.82
CIITA-206ENST00000571190 CALM1P0DP23 149 aa20.17■□□□□ 0.82
CIITA-206ENST00000571190 CALM2P0DP24 149 aa20.17■□□□□ 0.82
CIITA-206ENST00000571190 CALM3P0DP25 149 aa20.17■□□□□ 0.82
CIITA-206ENST00000571190 EPC2Q52LR7 807 aa20.17■□□□□ 0.82
CIITA-206ENST00000571190 TMTC3Q6ZXV5 915 aa20.17■□□□□ 0.82
CIITA-206ENST00000571190 FANCBQ8NB91 859 aa20.17■□□□□ 0.82
CIITA-206ENST00000571190 GIMAP8Q8ND71 665 aaPredicted RBP20.17■□□□□ 0.82
CIITA-206ENST00000571190 SEPT1Q8WYJ6 367 aa20.17■□□□□ 0.82
CIITA-206ENST00000571190 KHSRPQ92945 711 aaKnown RBP eCLIP20.17■□□□□ 0.82
CIITA-206ENST00000571190 UBE2ZQ9H832 354 aaPredicted RBP20.17■□□□□ 0.82
CIITA-206ENST00000571190 EHMT1Q9H9B1 1298 aa20.17■□□□□ 0.82
CIITA-206ENST00000571190 MGAT3Q09327 533 aa20.16■□□□□ 0.82
CIITA-206ENST00000571190 MARCH8Q5T0T0 291 aa20.16■□□□□ 0.82
CIITA-206ENST00000571190 SGMS1Q86VZ5 419 aa20.16■□□□□ 0.82
CIITA-206ENST00000571190 PCYT2Q99447 389 aa20.16■□□□□ 0.82
CIITA-206ENST00000571190 IFIH1Q9BYX4 1025 aaKnown RBP20.16■□□□□ 0.82
CIITA-206ENST00000571190 CD320Q9NPF0 282 aa20.16■□□□□ 0.82
CIITA-206ENST00000571190 JADE2Q9NQC1 790 aa20.16■□□□□ 0.82
CIITA-206ENST00000571190 PKD2L1Q9P0L9 805 aa20.16■□□□□ 0.82
CIITA-206ENST00000571190 PCDHA6Q9UN73 950 aa20.16■□□□□ 0.82
CIITA-206ENST00000571190 PCDHA8Q9Y5H6 950 aa20.16■□□□□ 0.82
CIITA-206ENST00000571190 SLC12A7Q9Y666 1083 aa20.16■□□□□ 0.82
CIITA-206ENST00000571190 MBLAC1A4D2B0 266 aaPredicted RBP20.15■□□□□ 0.82
CIITA-206ENST00000571190 MARK3P27448 753 aa20.15■□□□□ 0.82
CIITA-206ENST00000571190 APBB2Q92870 758 aa20.15■□□□□ 0.82
CIITA-206ENST00000571190 MRPL38Q96DV4 380 aaKnown RBP20.15■□□□□ 0.82
CIITA-206ENST00000571190 CDHR1Q96JP9 859 aa20.15■□□□□ 0.82
CIITA-206ENST00000571190 YME1L1Q96TA2 773 aa20.15■□□□□ 0.82
CIITA-206ENST00000571190 COL4A4P53420 1690 aaPredicted RBP20.15■□□□□ 0.82
CIITA-206ENST00000571190 BAZ2BQ9UIF8 2168 aaKnown RBP20.14■□□□□ 0.81
CIITA-206ENST00000571190 H3BNC9 293 aa20.14■□□□□ 0.81
CIITA-206ENST00000571190 LINC00271P0C7V0 271 aa20.14■□□□□ 0.81
CIITA-206ENST00000571190 GHRP10912 638 aa20.14■□□□□ 0.81
CIITA-206ENST00000571190 PPFIA1Q13136 1202 aa20.14■□□□□ 0.81
CIITA-206ENST00000571190 MTMR1Q13613 665 aa20.14■□□□□ 0.81
CIITA-206ENST00000571190 LPIN1Q14693 890 aa20.14■□□□□ 0.81
CIITA-206ENST00000571190 GRIK4Q16099 956 aa20.14■□□□□ 0.81
CIITA-206ENST00000571190 TYW1BQ6NUM6 668 aa20.14■□□□□ 0.81
CIITA-206ENST00000571190 TAF2Q6P1X5 1199 aa20.14■□□□□ 0.81
CIITA-206ENST00000571190 SKAP1Q86WV1 359 aa20.14■□□□□ 0.81
CIITA-206ENST00000571190 TMEM192Q8IY95 271 aa20.14■□□□□ 0.81
CIITA-206ENST00000571190 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.14■□□□□ 0.81
CIITA-206ENST00000571190 ZBTB10Q96DT7 871 aa20.14■□□□□ 0.81
CIITA-206ENST00000571190 SAMD11Q96NU1 681 aa20.14■□□□□ 0.81
CIITA-206ENST00000571190 C1QTNF1Q9BXJ1 281 aa20.14■□□□□ 0.81
CIITA-206ENST00000571190 ANO2Q9NQ90 1003 aa20.14■□□□□ 0.81
CIITA-206ENST00000571190 MYH6P13533 1939 aa20.14■□□□□ 0.81
CIITA-206ENST00000571190 FUT2Q10981 343 aa20.13■□□□□ 0.81
CIITA-206ENST00000571190 LEXMQ3ZCV2 418 aa20.13■□□□□ 0.81
CIITA-206ENST00000571190 WWC2Q6AWC2 1192 aa20.13■□□□□ 0.81
CIITA-206ENST00000571190 HEATR3Q7Z4Q2 680 aa20.13■□□□□ 0.81
CIITA-206ENST00000571190 MICU3Q86XE3 530 aa20.13■□□□□ 0.81
CIITA-206ENST00000571190 CYP2W1Q8TAV3 490 aa20.13■□□□□ 0.81
CIITA-206ENST00000571190 DNAJB3Q8WWF6 145 aa20.13■□□□□ 0.81
CIITA-206ENST00000571190 ERAP1Q9NZ08 941 aa20.13■□□□□ 0.81
CIITA-206ENST00000571190 TUBE1Q9UJT0 475 aa20.13■□□□□ 0.81
CIITA-206ENST00000571190 SPDYE3A6NKU9 549 aa20.12■□□□□ 0.81
CIITA-206ENST00000571190 MAFGO15525 162 aa20.12■□□□□ 0.81
CIITA-206ENST00000571190 KCNA5P22460 613 aa20.12■□□□□ 0.81
CIITA-206ENST00000571190 EXOSC10Q01780 885 aaKnown RBP20.12■□□□□ 0.81
CIITA-206ENST00000571190 GPM6BQ13491 265 aa20.12■□□□□ 0.81
CIITA-206ENST00000571190 FBXO47Q5MNV8 452 aa20.12■□□□□ 0.81
CIITA-206ENST00000571190 APOA5Q6Q788 366 aa20.12■□□□□ 0.81
CIITA-206ENST00000571190 GLG1Q92896 1179 aa20.12■□□□□ 0.81
CIITA-206ENST00000571190 MXRA8Q9BRK3 442 aa20.12■□□□□ 0.81
CIITA-206ENST00000571190 SMARCAD1Q9H4L7 1026 aa20.12■□□□□ 0.81
CIITA-206ENST00000571190 RC3H2Q9HBD1 1191 aaKnown RBP20.12■□□□□ 0.81
CIITA-206ENST00000571190 KCNH7Q9NS40 1196 aa20.12■□□□□ 0.81
CIITA-206ENST00000571190 BRPF3Q9ULD4 1205 aa20.12■□□□□ 0.81
CIITA-206ENST00000571190 CNTNAP5Q8WYK1 1306 aa20.11■□□□□ 0.81
CIITA-206ENST00000571190 ENPP3O14638 875 aa20.11■□□□□ 0.81
CIITA-206ENST00000571190 IL17RAQ96F46 866 aa20.11■□□□□ 0.81
CIITA-206ENST00000571190 PGBD1Q96JS3 809 aa20.11■□□□□ 0.81
CIITA-206ENST00000571190 TCEANC2Q96MN5 208 aa20.11■□□□□ 0.81
CIITA-206ENST00000571190 AGO3Q9H9G7 860 aaKnown RBP20.11■□□□□ 0.81
CIITA-206ENST00000571190 COL4A6Q14031 1691 aa20.1■□□□□ 0.81
CIITA-206ENST00000571190 ARP10275 920 aa20.1■□□□□ 0.81
CIITA-206ENST00000571190 INSRRP14616 1297 aa20.1■□□□□ 0.81
CIITA-206ENST00000571190 COL19A1Q14993 1142 aa20.1■□□□□ 0.81
CIITA-206ENST00000571190 PTPROQ16827 1216 aa20.1■□□□□ 0.81
CIITA-206ENST00000571190 TCEAL5Q5H9L2 206 aa20.1■□□□□ 0.81
CIITA-206ENST00000571190 RASEFQ8IZ41 740 aa20.1■□□□□ 0.81
CIITA-206ENST00000571190 BANK1Q8NDB2 785 aa20.1■□□□□ 0.81
CIITA-206ENST00000571190 NEK9Q8TD19 979 aa20.1■□□□□ 0.81
CIITA-206ENST00000571190 LINC01599Q8WXQ3 324 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms