RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 ZNF76P36508 570 aa15.27■□□□□ 0.04
RPAIN-207ENST00000570883 ZNF200P98182 395 aaPredicted RBP15.27■□□□□ 0.04
RPAIN-207ENST00000570883 LRIT3Q3SXY7 679 aa15.27■□□□□ 0.04
RPAIN-207ENST00000570883 UTP14CQ5TAP6 766 aaKnown RBP15.27■□□□□ 0.04
RPAIN-207ENST00000570883 PLA2G4DQ86XP0 818 aa15.27■□□□□ 0.04
RPAIN-207ENST00000570883 BLIDQ8IZY5 108 aa15.27■□□□□ 0.04
RPAIN-207ENST00000570883 TMEM199Q8N511 208 aa15.27■□□□□ 0.04
RPAIN-207ENST00000570883 WNT8BQ93098 351 aa15.27■□□□□ 0.04
RPAIN-207ENST00000570883 LENG9Q96B70 501 aa15.27■□□□□ 0.04
RPAIN-207ENST00000570883 SCLYQ96I15 445 aa15.27■□□□□ 0.04
RPAIN-207ENST00000570883 UIMC1Q96RL1 719 aa15.27■□□□□ 0.04
RPAIN-207ENST00000570883 EVPLQ92817 2033 aa15.27■□□□□ 0.03
RPAIN-207ENST00000570883 RBAK-RBAKDNI3L0D1 243 aa15.26■□□□□ 0.03
RPAIN-207ENST00000570883 DHX15O43143 795 aaKnown RBP15.26■□□□□ 0.03
RPAIN-207ENST00000570883 CCNE2O96020 404 aa15.26■□□□□ 0.03
RPAIN-207ENST00000570883 ACRP10323 421 aa15.26■□□□□ 0.03
RPAIN-207ENST00000570883 PPIGQ13427 754 aaKnown RBP eCLIP15.26■□□□□ 0.032e-8■■■□□ 15.8
RPAIN-207ENST00000570883 SEPT1Q8WYJ6 367 aa15.26■□□□□ 0.03
RPAIN-207ENST00000570883 PCYT2Q99447 389 aa15.26■□□□□ 0.03
RPAIN-207ENST00000570883 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.26■□□□□ 0.033e-12■□□□□ 9
RPAIN-207ENST00000570883 SLC9A2Q9UBY0 812 aa15.26■□□□□ 0.03
RPAIN-207ENST00000570883 LIMCH1Q9UPQ0 1083 aa15.26■□□□□ 0.03
RPAIN-207ENST00000570883 NOD1Q9Y239 953 aa15.26■□□□□ 0.03
RPAIN-207ENST00000570883 EMSYQ7Z589 1322 aa15.25■□□□□ 0.03
RPAIN-207ENST00000570883 PITPNM1O00562 1244 aa15.25■□□□□ 0.03
RPAIN-207ENST00000570883 ACTR2P61160 394 aa15.25■□□□□ 0.03
RPAIN-207ENST00000570883 SETQ01105 290 aaPredicted RBP15.25■□□□□ 0.03
RPAIN-207ENST00000570883 RBL2Q08999 1139 aa15.25■□□□□ 0.03
RPAIN-207ENST00000570883 TRIM71Q2Q1W2 868 aaKnown RBP15.25■□□□□ 0.03
RPAIN-207ENST00000570883 PRR16Q569H4 304 aa15.25■□□□□ 0.03
RPAIN-207ENST00000570883 TMEM240Q5SV17 173 aa15.25■□□□□ 0.03
RPAIN-207ENST00000570883 GALNT17Q6IS24 598 aa15.25■□□□□ 0.03
RPAIN-207ENST00000570883 POTEDQ86YR6 584 aa15.25■□□□□ 0.03
RPAIN-207ENST00000570883 OXER1Q8TDS5 423 aa15.25■□□□□ 0.03
RPAIN-207ENST00000570883 TBCKQ8TEA7 893 aa15.25■□□□□ 0.03
RPAIN-207ENST00000570883 SDF4Q9BRK5 362 aa15.25■□□□□ 0.03
RPAIN-207ENST00000570883 RNPEPQ9H4A4 650 aa15.25■□□□□ 0.03
RPAIN-207ENST00000570883 IL23AQ9NPF7 189 aa15.25■□□□□ 0.03
RPAIN-207ENST00000570883 ZNF215Q9UL58 517 aaPredicted RBP15.25■□□□□ 0.03
RPAIN-207ENST00000570883 CHD7Q9P2D1 2997 aa15.24■□□□□ 0.03
RPAIN-207ENST00000570883 MICAL3Q7RTP6 2002 aa15.24■□□□□ 0.03
RPAIN-207ENST00000570883 DDX39AO00148 427 aaKnown RBP15.24■□□□□ 0.03
RPAIN-207ENST00000570883 IPO5O00410 1097 aaKnown RBP15.24■□□□□ 0.03
RPAIN-207ENST00000570883 LGR5O75473 907 aa15.24■□□□□ 0.03
RPAIN-207ENST00000570883 SERINC5Q86VE9 423 aa15.24■□□□□ 0.03
RPAIN-207ENST00000570883 CCDC83Q8IWF9 413 aa15.24■□□□□ 0.03
RPAIN-207ENST00000570883 RNPC3Q96LT9 517 aaKnown RBP15.24■□□□□ 0.03
RPAIN-207ENST00000570883 TBC1D32Q96NH3 1257 aa15.24■□□□□ 0.03
RPAIN-207ENST00000570883 GTF3C3Q9Y5Q9 886 aa15.24■□□□□ 0.03
RPAIN-207ENST00000570883 MYO9BQ13459 2157 aa15.24■□□□□ 0.03
RPAIN-207ENST00000570883 C17orf102A2RUQ5 167 aa15.23■□□□□ 0.03
RPAIN-207ENST00000570883 CD2BP2O95400 341 aaKnown RBP15.23■□□□□ 0.03
RPAIN-207ENST00000570883 SLC34A2O95436 690 aa15.23■□□□□ 0.03
RPAIN-207ENST00000570883 TDP2O95551 362 aa15.23■□□□□ 0.03
RPAIN-207ENST00000570883 IQCF3P0C7M6 154 aa15.23■□□□□ 0.03
RPAIN-207ENST00000570883 MARK3P27448 753 aa15.23■□□□□ 0.03
RPAIN-207ENST00000570883 USP11P51784 963 aa15.23■□□□□ 0.03
RPAIN-207ENST00000570883 ADAM17P78536 824 aa15.23■□□□□ 0.03
RPAIN-207ENST00000570883 PTK7Q13308 1070 aa15.23■□□□□ 0.03
RPAIN-207ENST00000570883 BFSP2Q13515 415 aa15.23■□□□□ 0.03
RPAIN-207ENST00000570883 NONOQ15233 471 aaKnown RBP eCLIP15.23■□□□□ 0.03
RPAIN-207ENST00000570883 RABEP1Q15276 862 aa15.23■□□□□ 0.03
RPAIN-207ENST00000570883 RASIP1Q5U651 963 aa15.23■□□□□ 0.03
RPAIN-207ENST00000570883 TRAF7Q6Q0C0 670 aa15.23■□□□□ 0.03
RPAIN-207ENST00000570883 ZNF365Q70YC5 407 aa15.23■□□□□ 0.03
RPAIN-207ENST00000570883 KRT25Q7Z3Z0 450 aa15.23■□□□□ 0.03
RPAIN-207ENST00000570883 CAGE1Q8TC20 777 aa15.23■□□□□ 0.03
RPAIN-207ENST00000570883 LMBR1Q8WVP7 490 aa15.23■□□□□ 0.03
RPAIN-207ENST00000570883 WASF1Q92558 559 aa15.23■□□□□ 0.03
RPAIN-207ENST00000570883 TNFRSF25Q93038 417 aa15.23■□□□□ 0.03
RPAIN-207ENST00000570883 ZNF577Q9BSK1 485 aa15.23■□□□□ 0.03
RPAIN-207ENST00000570883 SETD4Q9NVD3 440 aa15.23■□□□□ 0.03
RPAIN-207ENST00000570883 CDH23Q9H251 3354 aa15.22■□□□□ 0.03
RPAIN-207ENST00000570883 COL6A3P12111 3177 aa15.22■□□□□ 0.03
RPAIN-207ENST00000570883 FAM205CA6NFA0 338 aa15.22■□□□□ 0.03
RPAIN-207ENST00000570883 MSH4O15457 936 aa15.22■□□□□ 0.03
RPAIN-207ENST00000570883 TREHO43280 583 aa15.22■□□□□ 0.03
RPAIN-207ENST00000570883 ATG7O95352 703 aa15.22■□□□□ 0.03
RPAIN-207ENST00000570883 CKBP12277 381 aa15.22■□□□□ 0.03
RPAIN-207ENST00000570883 FOSBP53539 338 aa15.22■□□□□ 0.03
RPAIN-207ENST00000570883 GPNMBQ14956 572 aa15.22■□□□□ 0.03
RPAIN-207ENST00000570883 INF2Q27J81 1249 aa15.22■□□□□ 0.03
RPAIN-207ENST00000570883 EARS2Q5JPH6 523 aaKnown RBP15.22■□□□□ 0.03
RPAIN-207ENST00000570883 PSRC1Q6PGN9 363 aaPredicted RBP15.22■□□□□ 0.03
RPAIN-207ENST00000570883 AFAP1L1Q8TED9 768 aa15.22■□□□□ 0.03
RPAIN-207ENST00000570883 GLG1Q92896 1179 aa15.22■□□□□ 0.03
RPAIN-207ENST00000570883 ATP6V0A1Q93050 837 aa15.22■□□□□ 0.03
RPAIN-207ENST00000570883 MBOAT7Q96N66 472 aa15.22■□□□□ 0.03
RPAIN-207ENST00000570883 SMARCAD1Q9H4L7 1026 aa15.22■□□□□ 0.03
RPAIN-207ENST00000570883 ERAP1Q9NZ08 941 aa15.22■□□□□ 0.03
RPAIN-207ENST00000570883 CXXC1Q9P0U4 656 aaPredicted RBP15.22■□□□□ 0.03
RPAIN-207ENST00000570883 CYP3A7-CYP3A51PA0A087WV96 503 aa15.21■□□□□ 0.03
RPAIN-207ENST00000570883 IGKV6D-21A0A0A0MT36 114 aa15.21■□□□□ 0.03
RPAIN-207ENST00000570883 SELPP16109 830 aa15.21■□□□□ 0.03
RPAIN-207ENST00000570883 XBP1P17861 261 aa15.21■□□□□ 0.03
RPAIN-207ENST00000570883 CYP3A7P24462 503 aa15.21■□□□□ 0.03
RPAIN-207ENST00000570883 NR5A1Q13285 461 aa15.21■□□□□ 0.03
RPAIN-207ENST00000570883 FAM109BQ6ICB4 259 aaPredicted RBP15.21■□□□□ 0.03
RPAIN-207ENST00000570883 ABHD15Q6UXT9 468 aa15.21■□□□□ 0.03
RPAIN-207ENST00000570883 LRRC8DQ7L1W4 858 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 249.9 ms