RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 H3BRB1 525 aa14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 STK25O00506 426 aa14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 REC8O95072 547 aa14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 PARNO95453 639 aaKnown RBP14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 RABGGTBP53611 331 aa14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 RCAN1P53805 252 aa14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 NAPAP54920 295 aa14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 SP4Q02446 784 aa14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 RBL2Q08999 1139 aa14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 WWC2Q6AWC2 1192 aa14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 PPP1R18Q6NYC8 613 aa14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 HS6ST3Q8IZP7 471 aa14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 GIMAP8Q8ND71 665 aaPredicted RBP14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 GPRASP2Q96D09 838 aa14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 JAKMIP1Q96N16 626 aaKnown RBP14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 SLC9A7Q96T83 725 aa14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 GAS2L1Q99501 681 aaPredicted RBP14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 SENP7Q9BQF6 1050 aa14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 C16orf70Q9BSU1 422 aa14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 USP26Q9BXU7 913 aa14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 TUT1Q9H6E5 874 aaKnown RBP14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 ZNF215Q9UL58 517 aaPredicted RBP14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 YBX2Q9Y2T7 364 aaKnown RBP14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 PCDHA11Q9Y5I1 949 aa14.18□□□□□ -0.14
CTDNEP1-205ENST00000570828 C17orf102A2RUQ5 167 aa14.17□□□□□ -0.14
CTDNEP1-205ENST00000570828 hCG_1984214I3L0E3 225 aa14.17□□□□□ -0.14
CTDNEP1-205ENST00000570828 BAIAP3O94812 1187 aa14.17□□□□□ -0.14
CTDNEP1-205ENST00000570828 CKBP12277 381 aa14.17□□□□□ -0.14
CTDNEP1-205ENST00000570828 HSPA4P34932 840 aa14.17□□□□□ -0.14
CTDNEP1-205ENST00000570828 KCNJ6P48051 423 aa14.17□□□□□ -0.14
CTDNEP1-205ENST00000570828 PPP2R2DQ66LE6 453 aa14.17□□□□□ -0.14
CTDNEP1-205ENST00000570828 ZNF713Q8N859 430 aaPredicted RBP14.17□□□□□ -0.14
CTDNEP1-205ENST00000570828 GPR20Q99678 358 aa14.17□□□□□ -0.14
CTDNEP1-205ENST00000570828 BCAS3Q9H6U6 928 aa14.17□□□□□ -0.14
CTDNEP1-205ENST00000570828 PCDHA6Q9UN73 950 aa14.17□□□□□ -0.14
CTDNEP1-205ENST00000570828 PCDHGA4Q9Y5G9 962 aa14.17□□□□□ -0.14
CTDNEP1-205ENST00000570828 PCDHA8Q9Y5H6 950 aa14.17□□□□□ -0.14
CTDNEP1-205ENST00000570828 PRUNE2Q8WUY3 3088 aa14.17□□□□□ -0.14
CTDNEP1-205ENST00000570828 CCDC196A0A1B0GTZ2 297 aa14.16□□□□□ -0.14
CTDNEP1-205ENST00000570828 SMIM10L2AP0DMW4 78 aa14.16□□□□□ -0.14
CTDNEP1-205ENST00000570828 SMIM10L2BP0DMW5 78 aa14.16□□□□□ -0.14
CTDNEP1-205ENST00000570828 ITGB5P18084 799 aa14.16□□□□□ -0.14
CTDNEP1-205ENST00000570828 METAP2P50579 478 aaKnown RBP eCLIP14.16□□□□□ -0.144e-6■□□□□ 8.6
CTDNEP1-205ENST00000570828 ADCY7P51828 1080 aa14.16□□□□□ -0.14
CTDNEP1-205ENST00000570828 ZNF200P98182 395 aaPredicted RBP14.16□□□□□ -0.14
CTDNEP1-205ENST00000570828 FUT2Q10981 343 aa14.16□□□□□ -0.14
CTDNEP1-205ENST00000570828 MTMR1Q13613 665 aa14.16□□□□□ -0.14
CTDNEP1-205ENST00000570828 UTP14CQ5TAP6 766 aaKnown RBP14.16□□□□□ -0.14
CTDNEP1-205ENST00000570828 BLOC1S2Q6QNY1 142 aa14.16□□□□□ -0.14
CTDNEP1-205ENST00000570828 SERINC5Q86VE9 423 aa14.16□□□□□ -0.14
CTDNEP1-205ENST00000570828 TRIM50Q86XT4 487 aa14.16□□□□□ -0.14
CTDNEP1-205ENST00000570828 TEX2Q8IWB9 1127 aa14.16□□□□□ -0.14
CTDNEP1-205ENST00000570828 PHOSPHO2Q8TCD6 241 aa14.16□□□□□ -0.14
CTDNEP1-205ENST00000570828 KCNB2Q92953 911 aa14.16□□□□□ -0.14
CTDNEP1-205ENST00000570828 ATP6V0A1Q93050 837 aa14.16□□□□□ -0.14
CTDNEP1-205ENST00000570828 PRDM12Q9H4Q4 367 aa14.16□□□□□ -0.14
CTDNEP1-205ENST00000570828 RIC8AQ9NPQ8 531 aa14.16□□□□□ -0.14
CTDNEP1-205ENST00000570828 SNX14Q9Y5W7 946 aa14.16□□□□□ -0.14
CTDNEP1-205ENST00000570828 V9GY48 417 aaPredicted RBP14.16□□□□□ -0.14
CTDNEP1-205ENST00000570828 CUL9Q8IWT3 2517 aa14.16□□□□□ -0.14
CTDNEP1-205ENST00000570828 TANC1Q9C0D5 1861 aa14.16□□□□□ -0.14
CTDNEP1-205ENST00000570828 CHD7Q9P2D1 2997 aa14.15□□□□□ -0.14
CTDNEP1-205ENST00000570828 DLL1O00548 723 aa14.15□□□□□ -0.14
CTDNEP1-205ENST00000570828 GNAT1P11488 350 aa14.15□□□□□ -0.14
CTDNEP1-205ENST00000570828 CPA1P15085 419 aa14.15□□□□□ -0.14
CTDNEP1-205ENST00000570828 CDC27P30260 824 aa14.15□□□□□ -0.14
CTDNEP1-205ENST00000570828 THPOP40225 353 aa14.15□□□□□ -0.14
CTDNEP1-205ENST00000570828 APOBRQ0VD83 1088 aa14.15□□□□□ -0.14
CTDNEP1-205ENST00000570828 TRIM71Q2Q1W2 868 aaKnown RBP14.15□□□□□ -0.14
CTDNEP1-205ENST00000570828 ZNF618Q5T7W0 954 aa14.15□□□□□ -0.14
CTDNEP1-205ENST00000570828 CNKSR3Q6P9H4 555 aa14.15□□□□□ -0.14
CTDNEP1-205ENST00000570828 Q6ZUG5 572 aa14.15□□□□□ -0.14
CTDNEP1-205ENST00000570828 BRF1Q92994 677 aa14.15□□□□□ -0.14
CTDNEP1-205ENST00000570828 WNT8BQ93098 351 aa14.15□□□□□ -0.14
CTDNEP1-205ENST00000570828 MFRPQ9BY79 579 aa14.15□□□□□ -0.14
CTDNEP1-205ENST00000570828 GLT8D2Q9H1C3 349 aa14.15□□□□□ -0.14
CTDNEP1-205ENST00000570828 BARHL2Q9NY43 387 aa14.15□□□□□ -0.14
CTDNEP1-205ENST00000570828 PKD2L1Q9P0L9 805 aa14.15□□□□□ -0.14
CTDNEP1-205ENST00000570828 UBIAD1Q9Y5Z9 338 aa14.15□□□□□ -0.14
CTDNEP1-205ENST00000570828 STK24Q9Y6E0 443 aa14.15□□□□□ -0.14
CTDNEP1-205ENST00000570828 EMSYQ7Z589 1322 aa14.15□□□□□ -0.15
CTDNEP1-205ENST00000570828 KIF28PB7ZC32 967 aa14.14□□□□□ -0.15
CTDNEP1-205ENST00000570828 STXBP3O00186 592 aa14.14□□□□□ -0.15
CTDNEP1-205ENST00000570828 NBNO60934 754 aa14.14□□□□□ -0.15
CTDNEP1-205ENST00000570828 FOSP01100 380 aaPredicted RBP14.14□□□□□ -0.15
CTDNEP1-205ENST00000570828 CXCL10P02778 98 aa14.14□□□□□ -0.15
CTDNEP1-205ENST00000570828 CA3P07451 260 aa14.14□□□□□ -0.15
CTDNEP1-205ENST00000570828 MYOGP15173 224 aa14.14□□□□□ -0.15
CTDNEP1-205ENST00000570828 KCNA2P16389 499 aa14.14□□□□□ -0.15
CTDNEP1-205ENST00000570828 PSMA5P28066 241 aa14.14□□□□□ -0.15
CTDNEP1-205ENST00000570828 HOXC8P31273 242 aa14.14□□□□□ -0.15
CTDNEP1-205ENST00000570828 TCF7P36402 384 aaPredicted RBP14.14□□□□□ -0.15
CTDNEP1-205ENST00000570828 HIC1Q14526 733 aa14.14□□□□□ -0.15
CTDNEP1-205ENST00000570828 TYW1BQ6NUM6 668 aa14.14□□□□□ -0.15
CTDNEP1-205ENST00000570828 HERC6Q8IVU3 1022 aa14.14□□□□□ -0.15
CTDNEP1-205ENST00000570828 JADE2Q9NQC1 790 aa14.14□□□□□ -0.15
CTDNEP1-205ENST00000570828 FAM217BQ9NTX9 383 aaPredicted RBP14.14□□□□□ -0.15
CTDNEP1-205ENST00000570828 SMCO2A6NFE2 343 aa14.13□□□□□ -0.15
CTDNEP1-205ENST00000570828 RSPH10B2B2RC85 870 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms