RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 CLEC4DQ8WXI8 215 aa7.59□□□□□ -1.19
SMG6-204ENST00000570606 ZKSCAN3Q9BRR0 538 aa7.59□□□□□ -1.19
SMG6-204ENST00000570606 KAT14Q9H8E8 782 aa7.59□□□□□ -1.19
SMG6-204ENST00000570606 DIAPH3Q9NSV4 1193 aa7.59□□□□□ -1.19
SMG6-204ENST00000570606 NOVA2Q9UNW9 492 aaKnown RBP7.59□□□□□ -1.19
SMG6-204ENST00000570606 PCDHA11Q9Y5I1 949 aa7.59□□□□□ -1.19
SMG6-204ENST00000570606 ABCB11O95342 1321 aa7.58□□□□□ -1.2
SMG6-204ENST00000570606 RBM47A0AV96 593 aaKnown RBP7.58□□□□□ -1.2
SMG6-204ENST00000570606 ESPNB1AK53 854 aa7.58□□□□□ -1.2
SMG6-204ENST00000570606 TNFRSF10AO00220 468 aa7.58□□□□□ -1.2
SMG6-204ENST00000570606 ZNF213O14771 459 aa7.58□□□□□ -1.2
SMG6-204ENST00000570606 KPNA6O60684 536 aa7.58□□□□□ -1.2
SMG6-204ENST00000570606 SNHG28P0DPA3 235 aa7.58□□□□□ -1.2
SMG6-204ENST00000570606 TXNP10599 105 aaKnown RBP7.58□□□□□ -1.2
SMG6-204ENST00000570606 MYOGP15173 224 aa7.58□□□□□ -1.2
SMG6-204ENST00000570606 EDNRBP24530 442 aa7.58□□□□□ -1.2
SMG6-204ENST00000570606 RFC2P35250 354 aa7.58□□□□□ -1.2
SMG6-204ENST00000570606 NBPF20Q3BBV1 942 aa7.58□□□□□ -1.2
SMG6-204ENST00000570606 CCDC178Q5BJE1 867 aa7.58□□□□□ -1.2
SMG6-204ENST00000570606 TMEM67Q5HYA8 995 aa7.58□□□□□ -1.2
SMG6-204ENST00000570606 TMEM164Q5U3C3 297 aa7.58□□□□□ -1.2
SMG6-204ENST00000570606 B4GALNT3Q6L9W6 998 aa7.58□□□□□ -1.2
SMG6-204ENST00000570606 NFRKBQ6P4R8 1299 aa7.58□□□□□ -1.2
SMG6-204ENST00000570606 TICAM2Q86XR7 235 aa7.58□□□□□ -1.2
SMG6-204ENST00000570606 ATXN2LQ8WWM7 1075 aaKnown RBP7.58□□□□□ -1.2
SMG6-204ENST00000570606 COPS5Q92905 334 aa7.58□□□□□ -1.2
SMG6-204ENST00000570606 TTC14Q96N46 770 aa7.58□□□□□ -1.2
SMG6-204ENST00000570606 SLC9A7Q96T83 725 aa7.58□□□□□ -1.2
SMG6-204ENST00000570606 FTOQ9C0B1 505 aaKnown RBP eCLIP7.58□□□□□ -1.2
SMG6-204ENST00000570606 UBA5Q9GZZ9 404 aa7.58□□□□□ -1.2
SMG6-204ENST00000570606 CPVLQ9H3G5 476 aa7.58□□□□□ -1.2
SMG6-204ENST00000570606 ZBTB24O43167 697 aaPredicted RBP7.57□□□□□ -1.2
SMG6-204ENST00000570606 ARIH2O95376 493 aa7.57□□□□□ -1.2
SMG6-204ENST00000570606 CA3P07451 260 aa7.57□□□□□ -1.2
SMG6-204ENST00000570606 MMP3P08254 477 aa7.57□□□□□ -1.2
SMG6-204ENST00000570606 SDSP20132 328 aa7.57□□□□□ -1.2
SMG6-204ENST00000570606 KCNJ6P48051 423 aa7.57□□□□□ -1.2
SMG6-204ENST00000570606 NT5C2P49902 561 aa7.57□□□□□ -1.2
SMG6-204ENST00000570606 MRPS5P82675 430 aaKnown RBP7.57□□□□□ -1.2
SMG6-204ENST00000570606 SKOR1P84550 965 aa7.57□□□□□ -1.2
SMG6-204ENST00000570606 PTPN11Q06124 597 aaPredicted RBP7.57□□□□□ -1.2
SMG6-204ENST00000570606 BFSP2Q13515 415 aa7.57□□□□□ -1.2
SMG6-204ENST00000570606 EML3Q32P44 896 aa7.57□□□□□ -1.2
SMG6-204ENST00000570606 ASPRV1Q53RT3 343 aa7.57□□□□□ -1.2
SMG6-204ENST00000570606 CWC27Q6UX04 472 aaKnown RBP7.57□□□□□ -1.2
SMG6-204ENST00000570606 SEPT14Q6ZU15 432 aa7.57□□□□□ -1.2
SMG6-204ENST00000570606 CHST3Q7LGC8 479 aa7.57□□□□□ -1.2
SMG6-204ENST00000570606 UHRF1Q96T88 793 aaPredicted RBP7.57□□□□□ -1.2
SMG6-204ENST00000570606 UBAC1Q9BSL1 405 aa7.57□□□□□ -1.2
SMG6-204ENST00000570606 DOLKQ9UPQ8 538 aa7.57□□□□□ -1.2
SMG6-204ENST00000570606 MICAL3Q7RTP6 2002 aa7.57□□□□□ -1.2
SMG6-204ENST00000570606 REV3LO60673 3130 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 B4E1Z4 1266 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 KIF28PB7ZC32 967 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 HIP1O00291 1037 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 GH1P01241 217 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 PARP1P09874 1014 aaKnown RBP7.56□□□□□ -1.2
SMG6-204ENST00000570606 IQCF3P0C7M6 154 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 EIF2AK2P19525 551 aaKnown RBP7.56□□□□□ -1.2
SMG6-204ENST00000570606 GGCXP38435 758 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 WNT7BP56706 349 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 CLDN10P78369 228 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 KCNA1Q09470 495 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 AAMPQ13685 434 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 PTGISQ16647 500 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 IMMTQ16891 758 aaKnown RBP7.56□□□□□ -1.2
SMG6-204ENST00000570606 QRICH1Q2TAL8 776 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 RNF20Q5VTR2 975 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 ARHGEF16Q5VV41 709 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 PPP1R18Q6NYC8 613 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 FBXO11Q86XK2 927 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 DGKHQ86XP1 1220 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 MCF2L2Q86YR7 1114 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 ADGRF4Q8IZF3 695 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 ENAHQ8N8S7 591 aaPredicted RBP7.56□□□□□ -1.2
SMG6-204ENST00000570606 CAGE1Q8TC20 777 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 SYTL5Q8TDW5 730 aaPredicted RBP7.56□□□□□ -1.2
SMG6-204ENST00000570606 NSUN6Q8TEA1 469 aaKnown RBP7.56□□□□□ -1.2
SMG6-204ENST00000570606 AFG1LQ8WV93 481 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 ASB2Q96Q27 587 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 ZSCAN10Q96SZ4 725 aaPredicted RBP7.56□□□□□ -1.2
SMG6-204ENST00000570606 RMDN3Q96TC7 470 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 RWDD1Q9H446 243 aaPredicted RBP7.56□□□□□ -1.2
SMG6-204ENST00000570606 CERS4Q9HA82 394 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 CDV3Q9UKY7 258 aaKnown RBP7.56□□□□□ -1.2
SMG6-204ENST00000570606 MRPL11Q9Y3B7 192 aaKnown RBP7.56□□□□□ -1.2
SMG6-204ENST00000570606 MRVI1Q9Y6F6 885 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 SIP14410 1827 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 KAT6AQ92794 2004 aa7.56□□□□□ -1.2
SMG6-204ENST00000570606 DOCK5Q9H7D0 1870 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 BAIAP3O94812 1187 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 CFBP00751 764 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 ZNF286BP0CG31 522 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 CASTP20810 708 aaKnown RBP7.55□□□□□ -1.2
SMG6-204ENST00000570606 RPIAP49247 311 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 ARHGAP1Q07960 439 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 STXBP2Q15833 593 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 DGKDQ16760 1214 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 LY6KQ17RY6 165 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 AAK1Q2M2I8 961 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms