RNA–Protein interactions for RNA: ENST00000570146.3

TCF4-244, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-244ENST00000570146 PANK1Q8TE04 598 aa11.99□□□□□ -0.49
TCF4-244ENST00000570146 NEK1Q96PY6 1258 aa11.99□□□□□ -0.49
TCF4-244ENST00000570146 TUT1Q9H6E5 874 aaKnown RBP11.99□□□□□ -0.49
TCF4-244ENST00000570146 TLE6Q9H808 572 aa11.99□□□□□ -0.49
TCF4-244ENST00000570146 BARX2Q9UMQ3 279 aaPredicted RBP11.99□□□□□ -0.49
TCF4-244ENST00000570146 DDX19BQ9UMR2 479 aa11.99□□□□□ -0.49
TCF4-244ENST00000570146 MRPL11Q9Y3B7 192 aaKnown RBP11.99□□□□□ -0.49
TCF4-244ENST00000570146 CCDC171Q6TFL3 1326 aa11.99□□□□□ -0.49
TCF4-244ENST00000570146 TRIP12Q14669 1992 aaPredicted RBP11.99□□□□□ -0.49
TCF4-244ENST00000570146 TREHO43280 583 aa11.98□□□□□ -0.49
TCF4-244ENST00000570146 ORC4O43929 436 aa11.98□□□□□ -0.49
TCF4-244ENST00000570146 GGPS1O95749 300 aa11.98□□□□□ -0.49
TCF4-244ENST00000570146 NR3C2P08235 984 aa11.98□□□□□ -0.49
TCF4-244ENST00000570146 TGFB3P10600 412 aa11.98□□□□□ -0.49
TCF4-244ENST00000570146 PDAP1Q13442 181 aaKnown RBP11.98□□□□□ -0.49
TCF4-244ENST00000570146 MTMR3Q13615 1198 aa11.98□□□□□ -0.49
TCF4-244ENST00000570146 HSDL1Q3SXM5 330 aa11.98□□□□□ -0.49
TCF4-244ENST00000570146 RRP12Q5JTH9 1297 aaKnown RBP11.98□□□□□ -0.49
TCF4-244ENST00000570146 RBM23Q86U06 439 aaKnown RBP11.98□□□□□ -0.49
TCF4-244ENST00000570146 TTC14Q96N46 770 aa11.98□□□□□ -0.49
TCF4-244ENST00000570146 CDCA3Q99618 268 aaPredicted RBP11.98□□□□□ -0.49
TCF4-244ENST00000570146 MFSD1Q9H3U5 465 aa11.98□□□□□ -0.49
TCF4-244ENST00000570146 TCP11L1Q9NUJ3 509 aa11.98□□□□□ -0.49
TCF4-244ENST00000570146 ZNF215Q9UL58 517 aaPredicted RBP11.98□□□□□ -0.49
TCF4-244ENST00000570146 NR2E1Q9Y466 385 aa11.98□□□□□ -0.49
TCF4-244ENST00000570146 DMDP11532 3685 aa11.98□□□□□ -0.49
TCF4-244ENST00000570146 LINC00271P0C7V0 271 aa11.97□□□□□ -0.49
TCF4-244ENST00000570146 HOXC8P31273 242 aa11.97□□□□□ -0.49
TCF4-244ENST00000570146 HIC1Q14526 733 aa11.97□□□□□ -0.49
TCF4-244ENST00000570146 CDC37Q16543 378 aaPredicted RBP11.97□□□□□ -0.49
TCF4-244ENST00000570146 FAM26DQ5JW98 314 aa11.97□□□□□ -0.49
TCF4-244ENST00000570146 FRMD5Q7Z6J6 570 aa11.97□□□□□ -0.49
TCF4-244ENST00000570146 SIRT2Q8IXJ6 389 aa11.97□□□□□ -0.49
TCF4-244ENST00000570146 CMTR2Q8IYT2 770 aaKnown RBP11.97□□□□□ -0.49
TCF4-244ENST00000570146 SPPL3Q8TCT6 385 aa11.97□□□□□ -0.49
TCF4-244ENST00000570146 POF1BQ8WVV4 589 aa11.97□□□□□ -0.49
TCF4-244ENST00000570146 HS3ST6Q96QI5 342 aa11.97□□□□□ -0.49
TCF4-244ENST00000570146 C16orf70Q9BSU1 422 aa11.97□□□□□ -0.49
TCF4-244ENST00000570146 USP26Q9BXU7 913 aa11.97□□□□□ -0.49
TCF4-244ENST00000570146 RNPEPQ9H4A4 650 aa11.97□□□□□ -0.49
TCF4-244ENST00000570146 PXMP2Q9NR77 195 aa11.97□□□□□ -0.49
TCF4-244ENST00000570146 ANAPC4Q9UJX5 808 aa11.97□□□□□ -0.49
TCF4-244ENST00000570146 MICAL3Q7RTP6 2002 aa11.96□□□□□ -0.49
TCF4-244ENST00000570146 LCTP09848 1927 aa11.96□□□□□ -0.49
TCF4-244ENST00000570146 DHX16O60231 1041 aaKnown RBP11.96□□□□□ -0.49
TCF4-244ENST00000570146 SORBS3O60504 671 aa11.96□□□□□ -0.49
TCF4-244ENST00000570146 DGKIO75912 1065 aa11.96□□□□□ -0.49
TCF4-244ENST00000570146 ITGB1P05556 798 aa11.96□□□□□ -0.49
TCF4-244ENST00000570146 STAG3L1P0CL83 205 aa11.96□□□□□ -0.49
TCF4-244ENST00000570146 GHRP10912 638 aa11.96□□□□□ -0.49
TCF4-244ENST00000570146 MYCLP12524 364 aaPredicted RBP11.96□□□□□ -0.49
TCF4-244ENST00000570146 CAMK1Q14012 370 aa11.96□□□□□ -0.49
TCF4-244ENST00000570146 TAF2Q6P1X5 1199 aa11.96□□□□□ -0.49
TCF4-244ENST00000570146 DGLUCYQ7Z3D6 616 aa11.96□□□□□ -0.49
TCF4-244ENST00000570146 ADGRD2Q7Z7M1 963 aa11.96□□□□□ -0.49
TCF4-244ENST00000570146 KLHL23Q8NBE8 558 aa11.96□□□□□ -0.49
TCF4-244ENST00000570146 KREMEN2Q8NCW0 462 aa11.96□□□□□ -0.49
TCF4-244ENST00000570146 SUSD6Q92537 303 aa11.96□□□□□ -0.49
TCF4-244ENST00000570146 ZNF689Q96CS4 500 aaPredicted RBP11.96□□□□□ -0.49
TCF4-244ENST00000570146 RC3H2Q9HBD1 1191 aaKnown RBP11.96□□□□□ -0.49
TCF4-244ENST00000570146 AAASQ9NRG9 546 aa11.96□□□□□ -0.49
TCF4-244ENST00000570146 ZBTB40Q9NUA8 1239 aa11.96□□□□□ -0.49
TCF4-244ENST00000570146 ENPP3O14638 875 aa11.95□□□□□ -0.5
TCF4-244ENST00000570146 SMARCA5O60264 1052 aaPredicted RBP11.95□□□□□ -0.5
TCF4-244ENST00000570146 CFBP00751 764 aa11.95□□□□□ -0.5
TCF4-244ENST00000570146 LGALS2P05162 132 aa11.95□□□□□ -0.5
TCF4-244ENST00000570146 RPLP2P05387 115 aaKnown RBP11.95□□□□□ -0.5
TCF4-244ENST00000570146 ARHGAP4P98171 946 aa11.95□□□□□ -0.5
TCF4-244ENST00000570146 UBE3AQ05086 875 aa11.95□□□□□ -0.5
TCF4-244ENST00000570146 PDE12Q6L8Q7 609 aaKnown RBP11.95□□□□□ -0.5
TCF4-244ENST00000570146 KCNG4Q8TDN1 519 aa11.95□□□□□ -0.5
TCF4-244ENST00000570146 TBC1D5Q92609 795 aa11.95□□□□□ -0.5
TCF4-244ENST00000570146 SEC62Q99442 399 aaKnown RBP11.95□□□□□ -0.5
TCF4-244ENST00000570146 FTHL17Q9BXU8 183 aa11.95□□□□□ -0.5
TCF4-244ENST00000570146 TSHZ2Q9NRE2 1034 aa11.95□□□□□ -0.5
TCF4-244ENST00000570146 SETD4Q9NVD3 440 aa11.95□□□□□ -0.5
TCF4-244ENST00000570146 MAP3K20Q9NYL2 800 aaKnown RBP11.95□□□□□ -0.5
TCF4-244ENST00000570146 COL20A1Q9P218 1284 aa11.95□□□□□ -0.5
TCF4-244ENST00000570146 SORCS3Q9UPU3 1222 aa11.95□□□□□ -0.5
TCF4-244ENST00000570146 PCDHB12Q9Y5F1 795 aa11.95□□□□□ -0.5
TCF4-244ENST00000570146 MRPL42Q9Y6G3 142 aaKnown RBP11.95□□□□□ -0.5
TCF4-244ENST00000570146 RIF1Q5UIP0 2472 aaKnown RBP11.95□□□□□ -0.5
TCF4-244ENST00000570146 NRCAMQ92823 1304 aa11.94□□□□□ -0.5
TCF4-244ENST00000570146 RALGAPA2Q2PPJ7 1873 aa11.94□□□□□ -0.5
TCF4-244ENST00000570146 GLP2RO95838 553 aa11.94□□□□□ -0.5
TCF4-244ENST00000570146 PDGFBP01127 241 aaPredicted RBP11.94□□□□□ -0.5
TCF4-244ENST00000570146 GOLGA8HP0CJ92 632 aa11.94□□□□□ -0.5
TCF4-244ENST00000570146 SNHG28P0DPA3 235 aa11.94□□□□□ -0.5
TCF4-244ENST00000570146 PCP11498 1178 aaKnown RBP11.94□□□□□ -0.5
TCF4-244ENST00000570146 UBA1P22314 1058 aaKnown RBP11.94□□□□□ -0.5
TCF4-244ENST00000570146 DNAJB1P25685 340 aa11.94□□□□□ -0.5
TCF4-244ENST00000570146 CLCN5P51795 746 aa11.94□□□□□ -0.5
TCF4-244ENST00000570146 GNPTABQ3T906 1256 aa11.94□□□□□ -0.5
TCF4-244ENST00000570146 ZMYM1Q5SVZ6 1142 aa11.94□□□□□ -0.5
TCF4-244ENST00000570146 SPOUT1Q5T280 376 aaKnown RBP11.94□□□□□ -0.5
TCF4-244ENST00000570146 NPAS4Q8IUM7 802 aa11.94□□□□□ -0.5
TCF4-244ENST00000570146 KRTAP3-3Q9BYR6 98 aa11.94□□□□□ -0.5
TCF4-244ENST00000570146 KRTAP3-2Q9BYR7 98 aa11.94□□□□□ -0.5
TCF4-244ENST00000570146 UBA5Q9GZZ9 404 aa11.94□□□□□ -0.5
TCF4-244ENST00000570146 SEMA4AQ9H3S1 761 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms