RNA–Protein interactions for RNA: ENST00000569711.1

LINC01654-201, Transcript of long intergenic non-protein coding RNA 1654, humanhuman

TSL 1 (best) BASIC

Gene LINC01654, Length 2,471 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01654-201ENST00000569711 TAF4BQ92750 862 aa11.77□□□□□ -0.53
LINC01654-201ENST00000569711 MKL1Q969V6 931 aa11.77□□□□□ -0.53
LINC01654-201ENST00000569711 RBM12Q9NTZ6 932 aaKnown RBP11.77□□□□□ -0.53
LINC01654-201ENST00000569711 KIAA1024Q9UPX6 916 aa11.77□□□□□ -0.53
LINC01654-201ENST00000569711 PDXKO00764 312 aa11.77□□□□□ -0.53
LINC01654-201ENST00000569711 TLR2O60603 784 aa11.77□□□□□ -0.53
LINC01654-201ENST00000569711 PPP1R11O60927 126 aaPredicted RBP11.77□□□□□ -0.53
LINC01654-201ENST00000569711 PALMO75781 387 aa11.77□□□□□ -0.53
LINC01654-201ENST00000569711 GFPT2O94808 682 aa11.77□□□□□ -0.53
LINC01654-201ENST00000569711 FOSP01100 380 aaPredicted RBP11.77□□□□□ -0.53
LINC01654-201ENST00000569711 KRT18P05783 430 aaKnown RBP11.77□□□□□ -0.53
LINC01654-201ENST00000569711 RPL13P26373 211 aaKnown RBP11.77□□□□□ -0.53
LINC01654-201ENST00000569711 ECM1Q16610 540 aa11.77□□□□□ -0.53
LINC01654-201ENST00000569711 UBE2SQ16763 222 aa11.77□□□□□ -0.53
LINC01654-201ENST00000569711 Q4G0T1 1027 aa11.77□□□□□ -0.53
LINC01654-201ENST00000569711 VPS36Q86VN1 386 aa11.77□□□□□ -0.53
LINC01654-201ENST00000569711 CALR3Q96L12 384 aaKnown RBP11.77□□□□□ -0.53
LINC01654-201ENST00000569711 FAM20AQ96MK3 541 aa11.77□□□□□ -0.53
LINC01654-201ENST00000569711 GANQ9H2C0 597 aa11.77□□□□□ -0.53
LINC01654-201ENST00000569711 NLRC4Q9NPP4 1024 aa11.77□□□□□ -0.53
LINC01654-201ENST00000569711 POLLQ9UGP5 575 aa11.77□□□□□ -0.53
LINC01654-201ENST00000569711 RSPH14Q9UHP6 348 aa11.77□□□□□ -0.53
LINC01654-201ENST00000569711 SALL4Q9UJQ4 1053 aa11.77□□□□□ -0.53
LINC01654-201ENST00000569711 INTUQ9ULD6 942 aa11.77□□□□□ -0.53
LINC01654-201ENST00000569711 KIF13BQ9NQT8 1826 aa11.77□□□□□ -0.53
LINC01654-201ENST00000569711 ATXN2Q99700 1313 aaKnown RBP11.76□□□□□ -0.53
LINC01654-201ENST00000569711 GTPBP10A4D1E9 387 aaKnown RBP11.76□□□□□ -0.53
LINC01654-201ENST00000569711 SRRM3A6NNA2 597 aaPredicted RBP11.76□□□□□ -0.53
LINC01654-201ENST00000569711 EIF3HO15372 352 aaKnown RBP eCLIP11.76□□□□□ -0.53
LINC01654-201ENST00000569711 ZEB2O60315 1214 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 SHMT1P34896 483 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 PRKCIP41743 596 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 IRAK1P51617 712 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 SLC12A3P55017 1021 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 CDC37Q16543 378 aaPredicted RBP11.76□□□□□ -0.53
LINC01654-201ENST00000569711 BMT2Q1RMZ1 405 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 FAM196AQ6ZSG2 479 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 GSPT2Q8IYD1 628 aaKnown RBP11.76□□□□□ -0.53
LINC01654-201ENST00000569711 HDAC7Q8WUI4 952 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 TBC1D5Q92609 795 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 NGLY1Q96IV0 654 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 GPR101Q96P66 508 aaPredicted RBP11.76□□□□□ -0.53
LINC01654-201ENST00000569711 DHX36Q9H2U1 1008 aaKnown RBP11.76□□□□□ -0.53
LINC01654-201ENST00000569711 ARMCX3Q9UH62 379 aaPredicted RBP11.76□□□□□ -0.53
LINC01654-201ENST00000569711 A0A0A6YYK5 440 aaPredicted RBP11.76□□□□□ -0.53
LINC01654-201ENST00000569711 C6orf229H3BNL8 230 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 FLOT1O75955 427 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 AFPP02771 609 aaKnown RBP11.76□□□□□ -0.53
LINC01654-201ENST00000569711 SERPINB2P05120 415 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 RPA1P27694 616 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 KCNH2Q12809 1159 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 CUL1Q13616 776 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 RAPGEF1Q13905 1077 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 KIAA0753Q2KHM9 967 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 AMIGO3Q86WK7 504 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 MRIQ9BWK5 157 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 ANO3Q9BYT9 981 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 NYAP2Q9P242 653 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 TMEM59LQ9UK28 342 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 DNM3Q9UQ16 869 aa11.76□□□□□ -0.53
LINC01654-201ENST00000569711 EBAG9O00559 213 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 BUB1O43683 1085 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 SSBP05455 408 aaKnown RBP eCLIP11.75□□□□□ -0.53
LINC01654-201ENST00000569711 CXCR5P32302 372 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 MATR3P43243 847 aaKnown RBP eCLIP11.75□□□□□ -0.53
LINC01654-201ENST00000569711 NPEPPSP55786 919 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 GTF2IP78347 998 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 TRAF1Q13077 416 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 PICALMQ13492 652 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 EZH2Q15910 746 aaKnown RBP11.75□□□□□ -0.53
LINC01654-201ENST00000569711 KNOP1Q1ED39 458 aaKnown RBP11.75□□□□□ -0.53
LINC01654-201ENST00000569711 CFAP58Q5T655 872 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 C10orf67Q8IYJ2 551 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 SYT2Q8N9I0 419 aaPredicted RBP11.75□□□□□ -0.53
LINC01654-201ENST00000569711 ACTRT1Q8TDG2 376 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 RIN2Q8WYP3 895 aaPredicted RBP11.75□□□□□ -0.53
LINC01654-201ENST00000569711 INPP4AQ96PE3 977 aaPredicted RBP11.75□□□□□ -0.53
LINC01654-201ENST00000569711 EFCC1Q9HA90 598 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 USP40Q9NVE5 1235 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 HDAC9Q9UKV0 1011 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 USP17L10C9JJH3 530 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 E9PMD0 336 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 NCK2O43639 380 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 HEXIM1O94992 359 aaKnown RBP11.75□□□□□ -0.53
LINC01654-201ENST00000569711 NR2F2P24468 414 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 KLRC1P26715 233 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 RPS6KA1Q15418 735 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 NFIL3Q16649 462 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 EPM2AIP1Q7L775 607 aaPredicted RBP11.75□□□□□ -0.53
LINC01654-201ENST00000569711 PTF1AQ7RTS3 328 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 SYCE1Q8N0S2 351 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 IQCKQ8N0W5 287 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 USP38Q8NB14 1042 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 GLIS3Q8NEA6 775 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 CRYGNQ8WXF5 182 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 GDAP1L1Q96MZ0 367 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.75□□□□□ -0.53
LINC01654-201ENST00000569711 KANSL2Q9H9L4 492 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 LCMT1Q9UIC8 334 aa11.75□□□□□ -0.53
LINC01654-201ENST00000569711 PCDHA1Q9Y5I3 950 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms