RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 OR52Z1P0C646 297 aa18.08■□□□□ 0.48
USB1-215ENST00000569252 DDIT3P35638 169 aa18.08■□□□□ 0.48
USB1-215ENST00000569252 TXKP42681 527 aa18.08■□□□□ 0.48
USB1-215ENST00000569252 CPT1AP50416 773 aa18.08■□□□□ 0.48
USB1-215ENST00000569252 KRT85P78386 507 aa18.08■□□□□ 0.48
USB1-215ENST00000569252 NBR1Q14596 966 aa18.08■□□□□ 0.48
USB1-215ENST00000569252 STK38Q15208 465 aa18.08■□□□□ 0.48
USB1-215ENST00000569252 FAM173BQ6P4H8 233 aa18.08■□□□□ 0.48
USB1-215ENST00000569252 SLC39A5Q6ZMH5 540 aa18.08■□□□□ 0.48
USB1-215ENST00000569252 DTHD1Q6ZMT9 781 aa18.08■□□□□ 0.48
USB1-215ENST00000569252 RNF180Q86T96 592 aa18.08■□□□□ 0.48
USB1-215ENST00000569252 TLK2Q86UE8 772 aa18.08■□□□□ 0.48
USB1-215ENST00000569252 POTEDQ86YR6 584 aa18.08■□□□□ 0.48
USB1-215ENST00000569252 ARRDC4Q8NCT1 418 aa18.08■□□□□ 0.48
USB1-215ENST00000569252 TRIM43Q96BQ3 446 aaPredicted RBP18.08■□□□□ 0.48
USB1-215ENST00000569252 SPATA33Q96N06 139 aa18.08■□□□□ 0.48
USB1-215ENST00000569252 UIMC1Q96RL1 719 aa18.08■□□□□ 0.48
USB1-215ENST00000569252 TTYH1Q9H313 450 aaPredicted RBP18.08■□□□□ 0.48
USB1-215ENST00000569252 JPH1Q9HDC5 661 aaPredicted RBP18.08■□□□□ 0.48
USB1-215ENST00000569252 XPNPEP3Q9NQH7 507 aa18.08■□□□□ 0.48
USB1-215ENST00000569252 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.08■□□□□ 0.48
USB1-215ENST00000569252 TFIP11Q9UBB9 837 aaKnown RBP18.08■□□□□ 0.48
USB1-215ENST00000569252 ZDHHC9Q9Y397 364 aa18.08■□□□□ 0.48
USB1-215ENST00000569252 SAMM50Q9Y512 469 aa18.08■□□□□ 0.48
USB1-215ENST00000569252 NFASCO94856 1347 aa18.07■□□□□ 0.48
USB1-215ENST00000569252 DDX39AO00148 427 aaKnown RBP18.07■□□□□ 0.48
USB1-215ENST00000569252 EDIL3O43854 480 aa18.07■□□□□ 0.48
USB1-215ENST00000569252 SORBS3O60504 671 aa18.07■□□□□ 0.48
USB1-215ENST00000569252 ATP9AO75110 1047 aa18.07■□□□□ 0.48
USB1-215ENST00000569252 ARIH2O95376 493 aa18.07■□□□□ 0.48
USB1-215ENST00000569252 C6orf222P0C671 652 aaPredicted RBP18.07■□□□□ 0.48
USB1-215ENST00000569252 KCNA2P16389 499 aa18.07■□□□□ 0.48
USB1-215ENST00000569252 UBA1P22314 1058 aaKnown RBP18.07■□□□□ 0.48
USB1-215ENST00000569252 EPHB4P54760 987 aa18.07■□□□□ 0.48
USB1-215ENST00000569252 SP2Q02086 613 aa18.07■□□□□ 0.48
USB1-215ENST00000569252 ZNF697Q5TEC3 545 aa18.07■□□□□ 0.48
USB1-215ENST00000569252 METTL7BQ6UX53 244 aa18.07■□□□□ 0.48
USB1-215ENST00000569252 SLC5A5Q92911 643 aa18.07■□□□□ 0.48
USB1-215ENST00000569252 LENG9Q96B70 501 aa18.07■□□□□ 0.48
USB1-215ENST00000569252 PDLIM7Q9NR12 457 aa18.07■□□□□ 0.48
USB1-215ENST00000569252 SLC9A2Q9UBY0 812 aa18.07■□□□□ 0.48
USB1-215ENST00000569252 LCTP09848 1927 aa18.07■□□□□ 0.48
USB1-215ENST00000569252 TTC28Q96AY4 2481 aa18.07■□□□□ 0.48
USB1-215ENST00000569252 KRT76Q01546 638 aa18.06■□□□□ 0.48
USB1-215ENST00000569252 SP4Q02446 784 aa18.06■□□□□ 0.48
USB1-215ENST00000569252 SEMA3FQ13275 785 aa18.06■□□□□ 0.48
USB1-215ENST00000569252 ETNPPLQ8TBG4 499 aa18.06■□□□□ 0.48
USB1-215ENST00000569252 COPS5Q92905 334 aa18.06■□□□□ 0.48
USB1-215ENST00000569252 TTC12Q9H892 705 aaPredicted RBP18.06■□□□□ 0.48
USB1-215ENST00000569252 KCNMB3Q9NPA1 279 aa18.06■□□□□ 0.48
USB1-215ENST00000569252 POLR3EQ9NVU0 708 aa18.06■□□□□ 0.48
USB1-215ENST00000569252 GNEQ9Y223 722 aaKnown RBP18.06■□□□□ 0.48
USB1-215ENST00000569252 CLIC4Q9Y696 253 aa18.06■□□□□ 0.48
USB1-215ENST00000569252 MYH7BA7E2Y1 1941 aa18.06■□□□□ 0.48
USB1-215ENST00000569252 KPNA6O60684 536 aa18.05■□□□□ 0.48
USB1-215ENST00000569252 PRPHP41219 470 aa18.05■□□□□ 0.48
USB1-215ENST00000569252 TECP42680 631 aa18.05■□□□□ 0.48
USB1-215ENST00000569252 DNM1Q05193 864 aaKnown RBP18.05■□□□□ 0.48
USB1-215ENST00000569252 LRRC41Q15345 812 aa18.05■□□□□ 0.48
USB1-215ENST00000569252 GNASQ5JWF2 1037 aa18.05■□□□□ 0.48
USB1-215ENST00000569252 ARL6IP4Q66PJ3 421 aaKnown RBP18.05■□□□□ 0.48
USB1-215ENST00000569252 ZNF746Q6NUN9 644 aaPredicted RBP18.05■□□□□ 0.48
USB1-215ENST00000569252 SMAP1Q8IYB5 467 aaPredicted RBP18.05■□□□□ 0.48
USB1-215ENST00000569252 PCSK9Q8NBP7 692 aaKnown RBP18.05■□□□□ 0.48
USB1-215ENST00000569252 SEPT1Q8WYJ6 367 aa18.05■□□□□ 0.48
USB1-215ENST00000569252 EMID1Q96A84 441 aaPredicted RBP18.05■□□□□ 0.48
USB1-215ENST00000569252 MTMR9Q96QG7 549 aa18.05■□□□□ 0.48
USB1-215ENST00000569252 SCAND2PQ9GZW5 306 aaPredicted RBP18.05■□□□□ 0.48
USB1-215ENST00000569252 SEMA6BQ9H3T3 888 aa18.05■□□□□ 0.48
USB1-215ENST00000569252 PRKAG2Q9UGJ0 569 aa18.05■□□□□ 0.48
USB1-215ENST00000569252 STK24Q9Y6E0 443 aa18.05■□□□□ 0.48
USB1-215ENST00000569252 KBTBD13C9JR72 458 aa18.04■□□□□ 0.48
USB1-215ENST00000569252 WNT7AO00755 349 aa18.04■□□□□ 0.48
USB1-215ENST00000569252 CHMP2AO43633 222 aa18.04■□□□□ 0.48
USB1-215ENST00000569252 PPFIA4O75335 1185 aa18.04■□□□□ 0.48
USB1-215ENST00000569252 PGK1P00558 417 aa18.04■□□□□ 0.48
USB1-215ENST00000569252 SFNP31947 248 aa18.04■□□□□ 0.48
USB1-215ENST00000569252 GJA9P57773 515 aa18.04■□□□□ 0.48
USB1-215ENST00000569252 IRX5P78411 483 aaPredicted RBP18.04■□□□□ 0.48
USB1-215ENST00000569252 ARHGAP1Q07960 439 aa18.04■□□□□ 0.48
USB1-215ENST00000569252 ITGB3BPQ13352 177 aaPredicted RBP18.04■□□□□ 0.48
USB1-215ENST00000569252 FSCN1Q16658 493 aaKnown RBP18.04■□□□□ 0.48
USB1-215ENST00000569252 DGKDQ16760 1214 aa18.04■□□□□ 0.48
USB1-215ENST00000569252 CSPP1Q1MSJ5 1256 aa18.04■□□□□ 0.48
USB1-215ENST00000569252 FAM109BQ6ICB4 259 aaPredicted RBP18.04■□□□□ 0.48
USB1-215ENST00000569252 MIS18BP1Q6P0N0 1132 aa18.04■□□□□ 0.48
USB1-215ENST00000569252 MAFAQ8NHW3 353 aaPredicted RBP18.04■□□□□ 0.48
USB1-215ENST00000569252 PPTC7Q8NI37 304 aa18.04■□□□□ 0.48
USB1-215ENST00000569252 ERMNQ8TAM6 284 aa18.04■□□□□ 0.48
USB1-215ENST00000569252 AFG1LQ8WV93 481 aa18.04■□□□□ 0.48
USB1-215ENST00000569252 HAS1Q92839 578 aa18.04■□□□□ 0.48
USB1-215ENST00000569252 USP28Q96RU2 1077 aa18.04■□□□□ 0.48
USB1-215ENST00000569252 TMEM60Q9H2L4 133 aa18.04■□□□□ 0.48
USB1-215ENST00000569252 MCM3APO60318 1980 aa18.03■□□□□ 0.48
USB1-215ENST00000569252 WDR64B1ANS9 1081 aa18.03■□□□□ 0.48
USB1-215ENST00000569252 SPTLC2O15270 562 aa18.03■□□□□ 0.48
USB1-215ENST00000569252 PSMD10O75832 226 aa18.03■□□□□ 0.48
USB1-215ENST00000569252 YEATS4O95619 227 aa18.03■□□□□ 0.48
USB1-215ENST00000569252 PSAPP07602 524 aa18.03■□□□□ 0.48
USB1-215ENST00000569252 JAK3P52333 1124 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms