RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 PCDHGA4Q9Y5G9 962 aa11.8□□□□□ -0.52
CDH3-210ENST00000569117 MRVI1Q9Y6F6 885 aa11.8□□□□□ -0.52
CDH3-210ENST00000569117 WDR81Q562E7 1941 aa11.8□□□□□ -0.52
CDH3-210ENST00000569117 IPO5O00410 1097 aaKnown RBP11.79□□□□□ -0.52
CDH3-210ENST00000569117 SPTLC2O15270 562 aa11.79□□□□□ -0.52
CDH3-210ENST00000569117 ADCY3O60266 1144 aa11.79□□□□□ -0.52
CDH3-210ENST00000569117 HMGCRP04035 888 aa11.79□□□□□ -0.52
CDH3-210ENST00000569117 TGFB3P10600 412 aa11.79□□□□□ -0.52
CDH3-210ENST00000569117 KCNA2P16389 499 aa11.79□□□□□ -0.52
CDH3-210ENST00000569117 CYP2C19P33261 490 aa11.79□□□□□ -0.52
CDH3-210ENST00000569117 ACVR2BQ13705 512 aa11.79□□□□□ -0.52
CDH3-210ENST00000569117 CSPP1Q1MSJ5 1256 aa11.79□□□□□ -0.52
CDH3-210ENST00000569117 MFSD14CQ5VZR4 134 aa11.79□□□□□ -0.52
CDH3-210ENST00000569117 TAPT1Q6NXT6 567 aa11.79□□□□□ -0.52
CDH3-210ENST00000569117 KCNV1Q6PIU1 500 aa11.79□□□□□ -0.52
CDH3-210ENST00000569117 EEPD1Q7L9B9 569 aa11.79□□□□□ -0.52
CDH3-210ENST00000569117 RETREG2Q8NC44 543 aa11.79□□□□□ -0.52
CDH3-210ENST00000569117 RAET1EQ8TD07 263 aa11.79□□□□□ -0.52
CDH3-210ENST00000569117 RIT2Q99578 217 aa11.79□□□□□ -0.52
CDH3-210ENST00000569117 SENP7Q9BQF6 1050 aa11.79□□□□□ -0.52
CDH3-210ENST00000569117 ZNF577Q9BSK1 485 aa11.79□□□□□ -0.52
CDH3-210ENST00000569117 GDPD2Q9HCC8 539 aa11.79□□□□□ -0.52
CDH3-210ENST00000569117 FBXO2Q9UK22 296 aaPredicted RBP11.79□□□□□ -0.52
CDH3-210ENST00000569117 NFASCO94856 1347 aa11.79□□□□□ -0.52
CDH3-210ENST00000569117 GAS7O60861 476 aa11.78□□□□□ -0.52
CDH3-210ENST00000569117 PSMD10O75832 226 aa11.78□□□□□ -0.52
CDH3-210ENST00000569117 ZNF865P0CJ78 1059 aaPredicted RBP11.78□□□□□ -0.52
CDH3-210ENST00000569117 CYBAP13498 195 aa11.78□□□□□ -0.52
CDH3-210ENST00000569117 ELNP15502 786 aa11.78□□□□□ -0.52
CDH3-210ENST00000569117 UBA1P22314 1058 aaKnown RBP11.78□□□□□ -0.52
CDH3-210ENST00000569117 SPIRE1Q08AE8 756 aa11.78□□□□□ -0.52
CDH3-210ENST00000569117 ITGB3BPQ13352 177 aaPredicted RBP11.78□□□□□ -0.52
CDH3-210ENST00000569117 TTLL4Q14679 1199 aa11.78□□□□□ -0.52
CDH3-210ENST00000569117 TMEM266Q2M3C6 531 aa11.78□□□□□ -0.52
CDH3-210ENST00000569117 LRCH2Q5VUJ6 765 aa11.78□□□□□ -0.52
CDH3-210ENST00000569117 CCDC62Q6P9F0 684 aa11.78□□□□□ -0.52
CDH3-210ENST00000569117 SEPT14Q6ZU15 432 aa11.78□□□□□ -0.52
CDH3-210ENST00000569117 TBC1D22BQ9NU19 505 aa11.78□□□□□ -0.52
CDH3-210ENST00000569117 VAV3Q9UKW4 847 aa11.78□□□□□ -0.52
CDH3-210ENST00000569117 ZHX1Q9UKY1 873 aaPredicted RBP11.78□□□□□ -0.52
CDH3-210ENST00000569117 SRPRBQ9Y5M8 271 aaKnown RBP11.78□□□□□ -0.52
CDH3-210ENST00000569117 PTCH2Q9Y6C5 1203 aa11.78□□□□□ -0.52
CDH3-210ENST00000569117 DHX15O43143 795 aaKnown RBP11.77□□□□□ -0.53
CDH3-210ENST00000569117 ATP9AO75110 1047 aa11.77□□□□□ -0.53
CDH3-210ENST00000569117 ARIH2O95376 493 aa11.77□□□□□ -0.53
CDH3-210ENST00000569117 MARCKSP29966 332 aaPredicted RBP11.77□□□□□ -0.53
CDH3-210ENST00000569117 ME1P48163 572 aa11.77□□□□□ -0.53
CDH3-210ENST00000569117 LBX1P52954 281 aa11.77□□□□□ -0.53
CDH3-210ENST00000569117 PPP2R5CQ13362 524 aa11.77□□□□□ -0.53
CDH3-210ENST00000569117 MAP3K21Q5TCX8 1036 aa11.77□□□□□ -0.53
CDH3-210ENST00000569117 B3GNT9Q6UX72 402 aa11.77□□□□□ -0.53
CDH3-210ENST00000569117 DTHD1Q6ZMT9 781 aa11.77□□□□□ -0.53
CDH3-210ENST00000569117 CTU1Q7Z7A3 348 aaKnown RBP11.77□□□□□ -0.53
CDH3-210ENST00000569117 IGSF22Q8N9C0 903 aa11.77□□□□□ -0.53
CDH3-210ENST00000569117 GIMAP8Q8ND71 665 aaPredicted RBP11.77□□□□□ -0.53
CDH3-210ENST00000569117 GJA10Q969M2 543 aa11.77□□□□□ -0.53
CDH3-210ENST00000569117 TEKT3Q9BXF9 490 aa11.77□□□□□ -0.53
CDH3-210ENST00000569117 RAB34Q9BZG1 259 aa11.77□□□□□ -0.53
CDH3-210ENST00000569117 TTC12Q9H892 705 aaPredicted RBP11.77□□□□□ -0.53
CDH3-210ENST00000569117 PDGFCQ9NRA1 345 aa11.77□□□□□ -0.53
CDH3-210ENST00000569117 DDX41Q9UJV9 622 aaKnown RBP11.77□□□□□ -0.53
CDH3-210ENST00000569117 PCDHA12Q9UN75 941 aa11.77□□□□□ -0.53
CDH3-210ENST00000569117 PTPN22Q9Y2R2 807 aa11.77□□□□□ -0.53
CDH3-210ENST00000569117 LOXHD1Q8IVV2 1947 aa11.77□□□□□ -0.53
CDH3-210ENST00000569117 VWA3AA6NCI4 1184 aa11.76□□□□□ -0.53
CDH3-210ENST00000569117 NKRFO15226 690 aaKnown RBP eCLIP11.76□□□□□ -0.53
CDH3-210ENST00000569117 MARCH6O60337 910 aa11.76□□□□□ -0.53
CDH3-210ENST00000569117 CUTAO60888 179 aa11.76□□□□□ -0.53
CDH3-210ENST00000569117 FARP2O94887 1054 aaPredicted RBP11.76□□□□□ -0.53
CDH3-210ENST00000569117 TXNP10599 105 aaKnown RBP11.76□□□□□ -0.53
CDH3-210ENST00000569117 GRK4P32298 578 aa11.76□□□□□ -0.53
CDH3-210ENST00000569117 LONP1P36776 959 aaKnown RBP11.76□□□□□ -0.53
CDH3-210ENST00000569117 ADCYAP1R1P41586 468 aa11.76□□□□□ -0.53
CDH3-210ENST00000569117 TXKP42681 527 aa11.76□□□□□ -0.53
CDH3-210ENST00000569117 KRT76Q01546 638 aa11.76□□□□□ -0.53
CDH3-210ENST00000569117 SP2Q02086 613 aa11.76□□□□□ -0.53
CDH3-210ENST00000569117 GRIN1Q05586 938 aa11.76□□□□□ -0.53
CDH3-210ENST00000569117 NEDD9Q14511 834 aa11.76□□□□□ -0.53
CDH3-210ENST00000569117 IL17AQ16552 155 aa11.76□□□□□ -0.53
CDH3-210ENST00000569117 CCDC144BQ3MJ40 725 aa11.76□□□□□ -0.53
CDH3-210ENST00000569117 DUSP28Q4G0W2 176 aa11.76□□□□□ -0.53
CDH3-210ENST00000569117 AXDND1Q5T1B0 1012 aaPredicted RBP11.76□□□□□ -0.53
CDH3-210ENST00000569117 METTL7BQ6UX53 244 aa11.76□□□□□ -0.53
CDH3-210ENST00000569117 EMID1Q96A84 441 aaPredicted RBP11.76□□□□□ -0.53
CDH3-210ENST00000569117 AK8Q96MA6 479 aa11.76□□□□□ -0.53
CDH3-210ENST00000569117 SDF4Q9BRK5 362 aa11.76□□□□□ -0.53
CDH3-210ENST00000569117 JPH1Q9HDC5 661 aaPredicted RBP11.76□□□□□ -0.53
CDH3-210ENST00000569117 PKD2L1Q9P0L9 805 aa11.76□□□□□ -0.53
CDH3-210ENST00000569117 TCEAL9Q9UHQ7 104 aa11.76□□□□□ -0.53
CDH3-210ENST00000569117 PCDHA7Q9UN72 937 aa11.76□□□□□ -0.53
CDH3-210ENST00000569117 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.75□□□□□ -0.53
CDH3-210ENST00000569117 POTEMA6NI47 508 aa11.75□□□□□ -0.53
CDH3-210ENST00000569117 GOLGA6L22H0YM25 854 aa11.75□□□□□ -0.53
CDH3-210ENST00000569117 ADCY6O43306 1168 aa11.75□□□□□ -0.53
CDH3-210ENST00000569117 GGPS1O95749 300 aa11.75□□□□□ -0.53
CDH3-210ENST00000569117 INHAP05111 366 aa11.75□□□□□ -0.53
CDH3-210ENST00000569117 AKR1A1P14550 325 aa11.75□□□□□ -0.53
CDH3-210ENST00000569117 TECP42680 631 aa11.75□□□□□ -0.53
CDH3-210ENST00000569117 CACNB2Q08289 660 aaPredicted RBP11.75□□□□□ -0.53
CDH3-210ENST00000569117 TRIM32Q13049 653 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms