RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 CCDC146Q8IYE0 955 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 RTF1Q92541 710 aaKnown RBP7.67□□□□□ -1.18
UBR1-208ENST00000569066 ASIC4Q96FT7 647 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 SEMA4AQ9H3S1 761 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 PDLIM7Q9NR12 457 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 ZNF174Q15697 407 aa7.66□□□□□ -1.18
UBR1-208ENST00000569066 PGM2L1Q6PCE3 622 aa7.66□□□□□ -1.18
UBR1-208ENST00000569066 KCTD1Q719H9 257 aa7.66□□□□□ -1.18
UBR1-208ENST00000569066 C1orf162Q8NEQ5 155 aaPredicted RBP7.66□□□□□ -1.18
UBR1-208ENST00000569066 NLGN2Q8NFZ4 835 aa7.66□□□□□ -1.18
UBR1-208ENST00000569066 JPH3Q8WXH2 748 aaPredicted RBP7.66□□□□□ -1.18
UBR1-208ENST00000569066 MISP3Q96FF7 219 aa7.66□□□□□ -1.18
UBR1-208ENST00000569066 SP110Q9HB58 689 aa7.66□□□□□ -1.18
UBR1-208ENST00000569066 B3GALT1Q9Y5Z6 326 aa7.66□□□□□ -1.18
UBR1-208ENST00000569066 PCDHGA12O60330 932 aa7.66□□□□□ -1.18
UBR1-208ENST00000569066 ITGB7P26010 798 aa7.66□□□□□ -1.18
UBR1-208ENST00000569066 LRRC32Q14392 662 aa7.66□□□□□ -1.18
UBR1-208ENST00000569066 RIOX2Q8IUF8 465 aa7.66□□□□□ -1.18
UBR1-208ENST00000569066 ZNF496Q96IT1 587 aaPredicted RBP7.66□□□□□ -1.18
UBR1-208ENST00000569066 CCDC39Q9UFE4 941 aa7.66□□□□□ -1.18
UBR1-208ENST00000569066 PCDHGA9Q9Y5G4 932 aaKnown RBP7.66□□□□□ -1.18
UBR1-208ENST00000569066 PCDHGA8Q9Y5G5 932 aa7.66□□□□□ -1.18
UBR1-208ENST00000569066 PCDHGA7Q9Y5G6 932 aa7.66□□□□□ -1.18
UBR1-208ENST00000569066 PCDHGA6Q9Y5G7 932 aa7.66□□□□□ -1.18
UBR1-208ENST00000569066 PCDHGA3Q9Y5H0 932 aa7.66□□□□□ -1.18
UBR1-208ENST00000569066 PCDHGA2Q9Y5H1 932 aa7.66□□□□□ -1.18
UBR1-208ENST00000569066 MSTNO14793 375 aa7.65□□□□□ -1.18
UBR1-208ENST00000569066 KDM1AO60341 852 aa7.65□□□□□ -1.18
UBR1-208ENST00000569066 ATF3P18847 181 aa7.65□□□□□ -1.18
UBR1-208ENST00000569066 CORO7P57737 925 aa7.65□□□□□ -1.18
UBR1-208ENST00000569066 BICRALQ6AI39 1079 aa7.65□□□□□ -1.18
UBR1-208ENST00000569066 CLEC4DQ8WXI8 215 aa7.65□□□□□ -1.18
UBR1-208ENST00000569066 PRC1O43663 620 aa7.64□□□□□ -1.19
UBR1-208ENST00000569066 HIP1RO75146 1068 aa7.64□□□□□ -1.19
UBR1-208ENST00000569066 GLI4P10075 376 aa7.64□□□□□ -1.19
UBR1-208ENST00000569066 PTPN1P18031 435 aaKnown RBP7.64□□□□□ -1.19
UBR1-208ENST00000569066 CATSPEREQ5SY80 951 aa7.64□□□□□ -1.19
UBR1-208ENST00000569066 ANKS4BQ8N8V4 417 aa7.64□□□□□ -1.19
UBR1-208ENST00000569066 SEMA6BQ9H3T3 888 aa7.64□□□□□ -1.19
UBR1-208ENST00000569066 LMCD1Q9NZU5 365 aa7.64□□□□□ -1.19
UBR1-208ENST00000569066 HCFC2Q9Y5Z7 792 aa7.64□□□□□ -1.19
UBR1-208ENST00000569066 ATP23Q9Y6H3 246 aa7.64□□□□□ -1.19
UBR1-208ENST00000569066 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.64□□□□□ -1.19
UBR1-208ENST00000569066 SGSM2O43147 1006 aa7.64□□□□□ -1.19
UBR1-208ENST00000569066 PEX14O75381 377 aa7.64□□□□□ -1.19
UBR1-208ENST00000569066 GNALP38405 381 aa7.64□□□□□ -1.19
UBR1-208ENST00000569066 TUSC3Q13454 348 aa7.64□□□□□ -1.19
UBR1-208ENST00000569066 EP400NLQ6ZTU2 488 aa7.64□□□□□ -1.19
UBR1-208ENST00000569066 TTC8Q8TAM2 541 aa7.64□□□□□ -1.19
UBR1-208ENST00000569066 FAXDC2Q96IV6 333 aa7.64□□□□□ -1.19
UBR1-208ENST00000569066 RIC8BQ9NVN3 520 aa7.64□□□□□ -1.19
UBR1-208ENST00000569066 MYOTQ9UBF9 498 aa7.64□□□□□ -1.19
UBR1-208ENST00000569066 KRIT1O00522 736 aa7.63□□□□□ -1.19
UBR1-208ENST00000569066 NRDCO43847 1150 aa7.63□□□□□ -1.19
UBR1-208ENST00000569066 GPR3P46089 330 aa7.63□□□□□ -1.19
UBR1-208ENST00000569066 PHC1P78364 1004 aa7.63□□□□□ -1.19
UBR1-208ENST00000569066 GRIN1Q05586 938 aa7.63□□□□□ -1.19
UBR1-208ENST00000569066 ARRDC4Q8NCT1 418 aa7.63□□□□□ -1.19
UBR1-208ENST00000569066 LMBR1Q8WVP7 490 aa7.63□□□□□ -1.19
UBR1-208ENST00000569066 DLG3Q92796 817 aa7.63□□□□□ -1.19
UBR1-208ENST00000569066 ACSL6Q9UKU0 697 aa7.63□□□□□ -1.19
UBR1-208ENST00000569066 WASHC2AQ641Q2 1341 aa7.63□□□□□ -1.19
UBR1-208ENST00000569066 SSTR4P31391 388 aa7.63□□□□□ -1.19
UBR1-208ENST00000569066 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.63□□□□□ -1.19
UBR1-208ENST00000569066 RASSF3Q86WH2 238 aa7.63□□□□□ -1.19
UBR1-208ENST00000569066 PDZD8Q8NEN9 1154 aa7.63□□□□□ -1.19
UBR1-208ENST00000569066 LUC7LQ9NQ29 371 aaKnown RBP7.63□□□□□ -1.19
UBR1-208ENST00000569066 PAK6Q9NQU5 681 aaPredicted RBP7.63□□□□□ -1.19
UBR1-208ENST00000569066 GPR160Q9UJ42 338 aa7.63□□□□□ -1.19
UBR1-208ENST00000569066 PALD1Q9ULE6 856 aa7.63□□□□□ -1.19
UBR1-208ENST00000569066 NOC2LQ9Y3T9 749 aaKnown RBP7.63□□□□□ -1.19
UBR1-208ENST00000569066 A0A1W2PQJ5 194 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 GOLGA8AA7E2F4 631 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 GOLGA8BA8MQT2 603 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 HGSO14964 777 aaPredicted RBP7.62□□□□□ -1.19
UBR1-208ENST00000569066 XPOTO43592 962 aaKnown RBP7.62□□□□□ -1.19
UBR1-208ENST00000569066 BUB1BO60566 1050 aaPredicted RBP7.62□□□□□ -1.19
UBR1-208ENST00000569066 ADAMTS4O75173 837 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 CLEC2LP0C7M8 214 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 PF4V1P10720 104 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 HTRA3P83110 453 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 CLUL1Q15846 466 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 EMC4Q5J8M3 183 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 FAM102BQ5T8I3 360 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 GALNT18Q6P9A2 607 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 PNMA8AQ86V59 439 aaPredicted RBP7.62□□□□□ -1.19
UBR1-208ENST00000569066 STK11IPQ8N1F8 1099 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 ZNF610Q8N9Z0 462 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 FLCNQ8NFG4 579 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 ZDHHC5Q9C0B5 715 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 CCM2LQ9NUG4 571 aaPredicted RBP7.62□□□□□ -1.19
UBR1-208ENST00000569066 MKS1Q9NXB0 559 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 MSRAQ9UJ68 235 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 PRAMEF25A6NGN4 478 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 CLASP2O75122 1294 aaKnown RBP7.62□□□□□ -1.19
UBR1-208ENST00000569066 CCND1P24385 295 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 CYP4F8P98187 520 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 MLC1Q15049 377 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 MAP9Q49MG5 647 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 MILR1Q7Z6M3 343 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms