RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 JAKMIP3Q5VZ66 844 aa33.54■■■□□ 2.96
RAB40C-211ENST00000568586 REXO1Q8N1G1 1221 aaKnown RBP33.54■■■□□ 2.96
RAB40C-211ENST00000568586 FAM161BQ96MY7 647 aa33.54■■■□□ 2.96
RAB40C-211ENST00000568586 TET1Q8NFU7 2136 aa33.53■■■□□ 2.96
RAB40C-211ENST00000568586 ARP10275 920 aa33.53■■■□□ 2.96
RAB40C-211ENST00000568586 ACTN1P12814 892 aa33.53■■■□□ 2.96
RAB40C-211ENST00000568586 SP4Q02446 784 aa33.53■■■□□ 2.96
RAB40C-211ENST00000568586 UTP14CQ5TAP6 766 aaKnown RBP33.53■■■□□ 2.96
RAB40C-211ENST00000568586 CCDC148Q8NFR7 591 aa33.53■■■□□ 2.96
RAB40C-211ENST00000568586 ATP6V0A1Q93050 837 aa33.53■■■□□ 2.96
RAB40C-211ENST00000568586 TIFAQ96CG3 184 aa33.53■■■□□ 2.96
RAB40C-211ENST00000568586 CDX2Q99626 313 aaPredicted RBP33.53■■■□□ 2.96
RAB40C-211ENST00000568586 AGO4Q9HCK5 861 aaKnown RBP33.53■■■□□ 2.96
RAB40C-211ENST00000568586 JPH1Q9HDC5 661 aaPredicted RBP33.53■■■□□ 2.96
RAB40C-211ENST00000568586 GNAT1P11488 350 aa33.52■■■□□ 2.96
RAB40C-211ENST00000568586 PBX2P40425 430 aa33.52■■■□□ 2.96
RAB40C-211ENST00000568586 RAB30Q15771 203 aa33.52■■■□□ 2.96
RAB40C-211ENST00000568586 BICD2Q8TD16 824 aa33.52■■■□□ 2.96
RAB40C-211ENST00000568586 LGR5O75473 907 aa33.51■■■□□ 2.95
RAB40C-211ENST00000568586 ZNF618Q5T7W0 954 aa33.51■■■□□ 2.95
RAB40C-211ENST00000568586 TRIM22Q8IYM9 498 aa33.51■■■□□ 2.95
RAB40C-211ENST00000568586 PKD2L1Q9P0L9 805 aa33.51■■■□□ 2.95
RAB40C-211ENST00000568586 SLC9A2Q9UBY0 812 aa33.51■■■□□ 2.95
RAB40C-211ENST00000568586 IGLV3-22A0A075B6J6 115 aa33.5■■■□□ 2.95
RAB40C-211ENST00000568586 FAM86B1E9PN63 330 aa33.5■■■□□ 2.95
RAB40C-211ENST00000568586 TREHO43280 583 aa33.5■■■□□ 2.95
RAB40C-211ENST00000568586 NBNO60934 754 aa33.5■■■□□ 2.95
RAB40C-211ENST00000568586 PPFIA3O75145 1194 aa33.5■■■□□ 2.95
RAB40C-211ENST00000568586 BAIAP3O94812 1187 aa33.5■■■□□ 2.95
RAB40C-211ENST00000568586 FAM86B2P0C5J1 330 aa33.5■■■□□ 2.95
RAB40C-211ENST00000568586 ITGB3BPQ13352 177 aaPredicted RBP33.5■■■□□ 2.95
RAB40C-211ENST00000568586 FAM177A1Q8N128 213 aaPredicted RBP33.5■■■□□ 2.95
RAB40C-211ENST00000568586 PHOSPHO2Q8TCD6 241 aa33.5■■■□□ 2.95
RAB40C-211ENST00000568586 LARP6Q9BRS8 491 aaKnown RBP33.5■■■□□ 2.95
RAB40C-211ENST00000568586 FTOQ9C0B1 505 aaKnown RBP eCLIP33.5■■■□□ 2.95
RAB40C-211ENST00000568586 SMARCAD1Q9H4L7 1026 aa33.5■■■□□ 2.95
RAB40C-211ENST00000568586 ZNF576Q9H609 170 aa33.5■■■□□ 2.95
RAB40C-211ENST00000568586 SETD4Q9NVD3 440 aa33.5■■■□□ 2.95
RAB40C-211ENST00000568586 ERAP1Q9NZ08 941 aa33.5■■■□□ 2.95
RAB40C-211ENST00000568586 EMSYQ7Z589 1322 aa33.5■■■□□ 2.95
RAB40C-211ENST00000568586 NRCAMQ92823 1304 aa33.5■■■□□ 2.95
RAB40C-211ENST00000568586 CAND2O75155 1236 aa33.49■■■□□ 2.95
RAB40C-211ENST00000568586 SSRP1Q08945 709 aaKnown RBP33.49■■■□□ 2.95
RAB40C-211ENST00000568586 MBTPS1Q14703 1052 aa33.49■■■□□ 2.95
RAB40C-211ENST00000568586 PCYT2Q99447 389 aa33.49■■■□□ 2.95
RAB40C-211ENST00000568586 SDF4Q9BRK5 362 aa33.49■■■□□ 2.95
RAB40C-211ENST00000568586 VPS54Q9P1Q0 977 aa33.49■■■□□ 2.95
RAB40C-211ENST00000568586 MSRAQ9UJ68 235 aa33.49■■■□□ 2.95
RAB40C-211ENST00000568586 ZBBXA8MT70 800 aa33.48■■■□□ 2.95
RAB40C-211ENST00000568586 CPLX1O14810 134 aa33.48■■■□□ 2.95
RAB40C-211ENST00000568586 ATG7O95352 703 aa33.48■■■□□ 2.95
RAB40C-211ENST00000568586 ATP2A2P16615 1042 aaKnown RBP33.48■■■□□ 2.95
RAB40C-211ENST00000568586 LMBR1Q8WVP7 490 aa33.48■■■□□ 2.95
RAB40C-211ENST00000568586 DEXIO95424 95 aa33.47■■■□□ 2.95
RAB40C-211ENST00000568586 CIITAP33076 1130 aa33.47■■■□□ 2.95
RAB40C-211ENST00000568586 ZNF76P36508 570 aa33.47■■■□□ 2.95
RAB40C-211ENST00000568586 CPLX2Q6PUV4 134 aaKnown RBP33.47■■■□□ 2.95
RAB40C-211ENST00000568586 PCDHA11Q9Y5I1 949 aa33.47■■■□□ 2.95
RAB40C-211ENST00000568586 CHD7Q9P2D1 2997 aa33.46■■■□□ 2.95
RAB40C-211ENST00000568586 ACTR2P61160 394 aa33.46■■■□□ 2.95
RAB40C-211ENST00000568586 CNKSR3Q6P9H4 555 aa33.46■■■□□ 2.95
RAB40C-211ENST00000568586 RPAINQ86UA6 219 aa33.46■■■□□ 2.95
RAB40C-211ENST00000568586 SLC9A7Q96T83 725 aa33.46■■■□□ 2.95
RAB40C-211ENST00000568586 YBX2Q9Y2T7 364 aaKnown RBP33.46■■■□□ 2.95
RAB40C-211ENST00000568586 DHX15O43143 795 aaKnown RBP33.45■■■□□ 2.95
RAB40C-211ENST00000568586 THPOP40225 353 aa33.45■■■□□ 2.95
RAB40C-211ENST00000568586 GRIN2CQ14957 1233 aa33.45■■■□□ 2.95
RAB40C-211ENST00000568586 PLPPR4Q7Z2D5 763 aa33.45■■■□□ 2.95
RAB40C-211ENST00000568586 PLA2G4DQ86XP0 818 aa33.45■■■□□ 2.95
RAB40C-211ENST00000568586 GLG1Q92896 1179 aa33.45■■■□□ 2.95
RAB40C-211ENST00000568586 TPCN1Q9ULQ1 816 aa33.45■■■□□ 2.95
RAB40C-211ENST00000568586 IGKV6D-21A0A0A0MT36 114 aa33.44■■■□□ 2.94
RAB40C-211ENST00000568586 RSPH10B2B2RC85 870 aa33.44■■■□□ 2.94
RAB40C-211ENST00000568586 EDIL3O43854 480 aa33.44■■■□□ 2.94
RAB40C-211ENST00000568586 PFKFB2O60825 505 aa33.44■■■□□ 2.94
RAB40C-211ENST00000568586 RSPH10BP0C881 870 aa33.44■■■□□ 2.94
RAB40C-211ENST00000568586 SCRN1Q12765 414 aa33.44■■■□□ 2.94
RAB40C-211ENST00000568586 STK3Q13188 491 aa33.44■■■□□ 2.94
RAB40C-211ENST00000568586 ANKRD1Q15327 319 aa33.44■■■□□ 2.94
RAB40C-211ENST00000568586 RASGRP4Q8TDF6 673 aa33.44■■■□□ 2.94
RAB40C-211ENST00000568586 A0A0C4DFX4 3053 aa33.44■■■□□ 2.94
RAB40C-211ENST00000568586 MBLAC1A4D2B0 266 aaPredicted RBP33.43■■■□□ 2.94
RAB40C-211ENST00000568586 SETQ01105 290 aaPredicted RBP33.43■■■□□ 2.94
RAB40C-211ENST00000568586 ABHD14A-ACY1A0A1B0GW23 586 aa33.42■■■□□ 2.94
RAB40C-211ENST00000568586 IPO5O00410 1097 aaKnown RBP33.42■■■□□ 2.94
RAB40C-211ENST00000568586 CCNE2O96020 404 aa33.42■■■□□ 2.94
RAB40C-211ENST00000568586 USP11P51784 963 aa33.42■■■□□ 2.94
RAB40C-211ENST00000568586 NLRP5P59047 1200 aa33.42■■■□□ 2.94
RAB40C-211ENST00000568586 PPFIA1Q13136 1202 aa33.42■■■□□ 2.94
RAB40C-211ENST00000568586 FAM26DQ5JW98 314 aa33.42■■■□□ 2.94
RAB40C-211ENST00000568586 GALNT17Q6IS24 598 aa33.42■■■□□ 2.94
RAB40C-211ENST00000568586 DAGLBQ8NCG7 672 aa33.42■■■□□ 2.94
RAB40C-211ENST00000568586 PCDHA4Q9UN74 947 aa33.42■■■□□ 2.94
RAB40C-211ENST00000568586 M0R2N6 131 aa33.41■■■□□ 2.94
RAB40C-211ENST00000568586 EFCAB14O75071 495 aa33.41■■■□□ 2.94
RAB40C-211ENST00000568586 SEC24BO95487 1268 aa33.41■■■□□ 2.94
RAB40C-211ENST00000568586 RABGGTBP53611 331 aa33.41■■■□□ 2.94
RAB40C-211ENST00000568586 NPY5RQ15761 445 aa33.41■■■□□ 2.94
RAB40C-211ENST00000568586 TCTN1Q2MV58 587 aa33.41■■■□□ 2.94
RAB40C-211ENST00000568586 MARCH8Q5T0T0 291 aa33.41■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 365.4 ms