RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 PLVAPQ9BX97 442 aa13.67□□□□□ -0.22
GTF3C1-209ENST00000568569 CNNM2Q9H8M5 875 aa13.67□□□□□ -0.22
GTF3C1-209ENST00000568569 RC3H2Q9HBD1 1191 aaKnown RBP13.67□□□□□ -0.22
GTF3C1-209ENST00000568569 CD207Q9UJ71 328 aa13.67□□□□□ -0.22
GTF3C1-209ENST00000568569 NRCAMQ92823 1304 aa13.66□□□□□ -0.22
GTF3C1-209ENST00000568569 CFAP54Q96N23 3096 aa13.66□□□□□ -0.22
GTF3C1-209ENST00000568569 FIBPO43427 364 aa13.66□□□□□ -0.22
GTF3C1-209ENST00000568569 CHRNA1P02708 482 aa13.66□□□□□ -0.22
GTF3C1-209ENST00000568569 BTG3Q14201 252 aaPredicted RBP13.66□□□□□ -0.22
GTF3C1-209ENST00000568569 PKN1Q16512 942 aa13.66□□□□□ -0.22
GTF3C1-209ENST00000568569 CYFIP1Q7L576 1253 aa13.66□□□□□ -0.22
GTF3C1-209ENST00000568569 BMP8AQ7Z5Y6 402 aa13.66□□□□□ -0.22
GTF3C1-209ENST00000568569 EDAQ92838 391 aa13.66□□□□□ -0.22
GTF3C1-209ENST00000568569 SNX27Q96L92 541 aa13.66□□□□□ -0.22
GTF3C1-209ENST00000568569 DSCC1Q9BVC3 393 aa13.66□□□□□ -0.22
GTF3C1-209ENST00000568569 BCAS3Q9H6U6 928 aa13.66□□□□□ -0.22
GTF3C1-209ENST00000568569 EHMT1Q9H9B1 1298 aa13.66□□□□□ -0.22
GTF3C1-209ENST00000568569 MAD2L2Q9UI95 211 aa13.66□□□□□ -0.22
GTF3C1-209ENST00000568569 FRMPD4Q14CM0 1322 aa13.65□□□□□ -0.22
GTF3C1-209ENST00000568569 TECTAO75443 2155 aa13.65□□□□□ -0.22
GTF3C1-209ENST00000568569 PALM3A6NDB9 673 aaPredicted RBP13.65□□□□□ -0.22
GTF3C1-209ENST00000568569 SPATA31C2B4DYI2 1134 aa13.65□□□□□ -0.22
GTF3C1-209ENST00000568569 CSPG5O95196 566 aa13.65□□□□□ -0.22
GTF3C1-209ENST00000568569 GTF2F1P35269 517 aaKnown RBP eCLIP13.65□□□□□ -0.22
GTF3C1-209ENST00000568569 NDUFV1P49821 464 aa13.65□□□□□ -0.22
GTF3C1-209ENST00000568569 PTPN5P54829 565 aa13.65□□□□□ -0.22
GTF3C1-209ENST00000568569 MRPS9P82933 396 aaKnown RBP13.65□□□□□ -0.22
GTF3C1-209ENST00000568569 HDAC1Q13547 482 aaPredicted RBP13.65□□□□□ -0.22
GTF3C1-209ENST00000568569 CWC27Q6UX04 472 aaKnown RBP13.65□□□□□ -0.22
GTF3C1-209ENST00000568569 RSPH3Q86UC2 560 aa13.65□□□□□ -0.22
GTF3C1-209ENST00000568569 ZNF689Q96CS4 500 aaPredicted RBP13.65□□□□□ -0.22
GTF3C1-209ENST00000568569 PRRX2Q99811 253 aa13.65□□□□□ -0.22
GTF3C1-209ENST00000568569 IGFLR1Q9H665 355 aa13.65□□□□□ -0.22
GTF3C1-209ENST00000568569 DIAPH3Q9NSV4 1193 aa13.65□□□□□ -0.22
GTF3C1-209ENST00000568569 ZDBF2Q9HCK1 2354 aa13.65□□□□□ -0.22
GTF3C1-209ENST00000568569 LINC01565O15544 149 aa13.64□□□□□ -0.23
GTF3C1-209ENST00000568569 EYA4O95677 639 aa13.64□□□□□ -0.23
GTF3C1-209ENST00000568569 SEMA3FQ13275 785 aa13.64□□□□□ -0.23
GTF3C1-209ENST00000568569 ADAM15Q13444 863 aa13.64□□□□□ -0.23
GTF3C1-209ENST00000568569 LPIN1Q14693 890 aa13.64□□□□□ -0.23
GTF3C1-209ENST00000568569 SEC23AQ15436 765 aa13.64□□□□□ -0.23
GTF3C1-209ENST00000568569 UTP14CQ5TAP6 766 aaKnown RBP13.64□□□□□ -0.23
GTF3C1-209ENST00000568569 TRIM67Q6ZTA4 783 aa13.64□□□□□ -0.23
GTF3C1-209ENST00000568569 PRSS33Q8NF86 280 aa13.64□□□□□ -0.23
GTF3C1-209ENST00000568569 P2RX5Q93086 422 aa13.64□□□□□ -0.23
GTF3C1-209ENST00000568569 MSLNLQ96KJ4 702 aa13.64□□□□□ -0.23
GTF3C1-209ENST00000568569 PIGSQ96S52 555 aa13.64□□□□□ -0.23
GTF3C1-209ENST00000568569 SENP7Q9BQF6 1050 aa13.64□□□□□ -0.23
GTF3C1-209ENST00000568569 LNPKQ9C0E8 428 aa13.64□□□□□ -0.23
GTF3C1-209ENST00000568569 RIOX1Q9H6W3 641 aa13.64□□□□□ -0.23
GTF3C1-209ENST00000568569 ALG13Q9NP73 1137 aaKnown RBP13.64□□□□□ -0.23
GTF3C1-209ENST00000568569 PLAGL2Q9UPG8 496 aa13.64□□□□□ -0.23
GTF3C1-209ENST00000568569 RALGAPA2Q2PPJ7 1873 aa13.63□□□□□ -0.23
GTF3C1-209ENST00000568569 MYH7BA7E2Y1 1941 aa13.63□□□□□ -0.23
GTF3C1-209ENST00000568569 CACNA1HO95180 2353 aa13.63□□□□□ -0.23
GTF3C1-209ENST00000568569 TMEM221A6NGB7 291 aa13.63□□□□□ -0.23
GTF3C1-209ENST00000568569 M0R296 226 aa13.63□□□□□ -0.23
GTF3C1-209ENST00000568569 HIP1O00291 1037 aa13.63□□□□□ -0.23
GTF3C1-209ENST00000568569 ENPP3O14638 875 aa13.63□□□□□ -0.23
GTF3C1-209ENST00000568569 DGKIO75912 1065 aa13.63□□□□□ -0.23
GTF3C1-209ENST00000568569 SP4Q02446 784 aa13.63□□□□□ -0.23
GTF3C1-209ENST00000568569 MGAT3Q09327 533 aa13.63□□□□□ -0.23
GTF3C1-209ENST00000568569 CAMK1Q14012 370 aa13.63□□□□□ -0.23
GTF3C1-209ENST00000568569 SLC35G1Q2M3R5 365 aa13.63□□□□□ -0.23
GTF3C1-209ENST00000568569 NAALADL2Q58DX5 795 aa13.63□□□□□ -0.23
GTF3C1-209ENST00000568569 RUFY4Q6ZNE9 571 aa13.63□□□□□ -0.23
GTF3C1-209ENST00000568569 SUGP1Q8IWZ8 645 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-209ENST00000568569 SMRP1Q8NCR6 262 aa13.63□□□□□ -0.23
GTF3C1-209ENST00000568569 PBXIP1Q96AQ6 731 aa13.63□□□□□ -0.23
GTF3C1-209ENST00000568569 PHOX2BQ99453 314 aa13.63□□□□□ -0.23
GTF3C1-209ENST00000568569 RTEL1Q9NZ71 1219 aa13.63□□□□□ -0.23
GTF3C1-209ENST00000568569 SUPT16HQ9Y5B9 1047 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-209ENST00000568569 NLRC5Q86WI3 1866 aa13.62□□□□□ -0.23
GTF3C1-209ENST00000568569 PNMA6FA0A0J9YX94 578 aa13.62□□□□□ -0.23
GTF3C1-209ENST00000568569 ST18O60284 1047 aa13.62□□□□□ -0.23
GTF3C1-209ENST00000568569 RPLP2P05387 115 aaKnown RBP13.62□□□□□ -0.23
GTF3C1-209ENST00000568569 PPFIA1Q13136 1202 aa13.62□□□□□ -0.23
GTF3C1-209ENST00000568569 GRM4Q14833 912 aa13.62□□□□□ -0.23
GTF3C1-209ENST00000568569 FBXO47Q5MNV8 452 aa13.62□□□□□ -0.23
GTF3C1-209ENST00000568569 IER5LQ5T953 404 aa13.62□□□□□ -0.23
GTF3C1-209ENST00000568569 TSHZ1Q6ZSZ6 1077 aa13.62□□□□□ -0.23
GTF3C1-209ENST00000568569 CMTR2Q8IYT2 770 aaKnown RBP13.62□□□□□ -0.23
GTF3C1-209ENST00000568569 EFHBQ8N7U6 833 aa13.62□□□□□ -0.23
GTF3C1-209ENST00000568569 GIMAP8Q8ND71 665 aaPredicted RBP13.62□□□□□ -0.23
GTF3C1-209ENST00000568569 TUBE1Q9UJT0 475 aa13.62□□□□□ -0.23
GTF3C1-209ENST00000568569 TELO2Q9Y4R8 837 aa13.62□□□□□ -0.23
GTF3C1-209ENST00000568569 MRPL42Q9Y6G3 142 aaKnown RBP13.62□□□□□ -0.23
GTF3C1-209ENST00000568569 MYH6P13533 1939 aa13.62□□□□□ -0.23
GTF3C1-209ENST00000568569 LAMA4Q16363 1823 aa13.62□□□□□ -0.23
GTF3C1-209ENST00000568569 LOC730098B7Z3J9 87 aa13.61□□□□□ -0.23
GTF3C1-209ENST00000568569 CYTH3O43739 400 aa13.61□□□□□ -0.23
GTF3C1-209ENST00000568569 ITGB1P05556 798 aa13.61□□□□□ -0.23
GTF3C1-209ENST00000568569 TCF7P36402 384 aaPredicted RBP13.61□□□□□ -0.23
GTF3C1-209ENST00000568569 COASYQ13057 564 aa13.61□□□□□ -0.23
GTF3C1-209ENST00000568569 GRIK4Q16099 956 aa13.61□□□□□ -0.23
GTF3C1-209ENST00000568569 PCNX4Q63HM2 1172 aa13.61□□□□□ -0.23
GTF3C1-209ENST00000568569 XRRA1Q6P2D8 792 aa13.61□□□□□ -0.23
GTF3C1-209ENST00000568569 CYB5R4Q7L1T6 521 aa13.61□□□□□ -0.23
GTF3C1-209ENST00000568569 NPAS4Q8IUM7 802 aa13.61□□□□□ -0.23
GTF3C1-209ENST00000568569 DNAJB3Q8WWF6 145 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms