RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 TREHO43280 583 aa16.48■□□□□ 0.23
CMTM3-215ENST00000568477 PDIA3P30101 505 aaKnown RBP16.48■□□□□ 0.23
CMTM3-215ENST00000568477 CLK2P49760 499 aaKnown RBP16.48■□□□□ 0.23
CMTM3-215ENST00000568477 EVCP57679 992 aa16.48■□□□□ 0.23
CMTM3-215ENST00000568477 GPNMBQ14956 572 aa16.48■□□□□ 0.23
CMTM3-215ENST00000568477 CEP55Q53EZ4 464 aa16.48■□□□□ 0.23
CMTM3-215ENST00000568477 JAKMIP3Q5VZ66 844 aa16.48■□□□□ 0.23
CMTM3-215ENST00000568477 MCTP2Q6DN12 878 aa16.48■□□□□ 0.23
CMTM3-215ENST00000568477 TRAF7Q6Q0C0 670 aa16.48■□□□□ 0.23
CMTM3-215ENST00000568477 PHKBQ93100 1093 aa16.48■□□□□ 0.23
CMTM3-215ENST00000568477 SDF4Q9BRK5 362 aa16.48■□□□□ 0.23
CMTM3-215ENST00000568477 RNF26Q9BY78 433 aaPredicted RBP16.48■□□□□ 0.23
CMTM3-215ENST00000568477 TM6SF1Q9BZW5 370 aa16.48■□□□□ 0.23
CMTM3-215ENST00000568477 C6orf50Q9HD87 102 aa16.48■□□□□ 0.23
CMTM3-215ENST00000568477 JPH1Q9HDC5 661 aaPredicted RBP16.48■□□□□ 0.23
CMTM3-215ENST00000568477 SETD4Q9NVD3 440 aa16.48■□□□□ 0.23
CMTM3-215ENST00000568477 EMSYQ7Z589 1322 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 GSTTP1A0A1W2PQM5 241 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 RSPH10B2B2RC85 870 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 CAND2O75155 1236 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 RSPH10BP0C881 870 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 MYOGP15173 224 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 IFNAR1P17181 557 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 ZNF76P36508 570 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 CCT2P78371 535 aaKnown RBP16.47■□□□□ 0.23
CMTM3-215ENST00000568477 ARHGAP4P98171 946 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 MBTPS1Q14703 1052 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 NTRK3Q16288 839 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 PKN1Q16512 942 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 PPP2R2DQ66LE6 453 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 HERC6Q8IVU3 1022 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 REXO1Q8N1G1 1221 aaKnown RBP16.47■□□□□ 0.23
CMTM3-215ENST00000568477 CYP2W1Q8TAV3 490 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 LMBR1Q8WVP7 490 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 GLG1Q92896 1179 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 GAS2L1Q99501 681 aaPredicted RBP16.47■□□□□ 0.23
CMTM3-215ENST00000568477 SLC26A6Q9BXS9 759 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 ZMYND12Q9H0C1 365 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 SMARCAD1Q9H4L7 1026 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 PRDM12Q9H4Q4 367 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 NCOA5Q9HCD5 579 aaKnown RBP16.47■□□□□ 0.23
CMTM3-215ENST00000568477 ERAP1Q9NZ08 941 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 SLC9A2Q9UBY0 812 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 GBF1Q92538 1859 aa16.47■□□□□ 0.23
CMTM3-215ENST00000568477 NFASCO94856 1347 aa16.46■□□□□ 0.23
CMTM3-215ENST00000568477 NRCAMQ92823 1304 aa16.46■□□□□ 0.23
CMTM3-215ENST00000568477 CHD9Q3L8U1 2897 aa16.46■□□□□ 0.23
CMTM3-215ENST00000568477 KIF28PB7ZC32 967 aa16.46■□□□□ 0.23
CMTM3-215ENST00000568477 MEIS1O00470 390 aa16.46■□□□□ 0.23
CMTM3-215ENST00000568477 EFCAB14O75071 495 aa16.46■□□□□ 0.23
CMTM3-215ENST00000568477 ARP10275 920 aa16.46■□□□□ 0.23
CMTM3-215ENST00000568477 GNA11P29992 359 aa16.46■□□□□ 0.23
CMTM3-215ENST00000568477 WDR5P61964 334 aaKnown RBP16.46■□□□□ 0.23
CMTM3-215ENST00000568477 PPFIA1Q13136 1202 aa16.46■□□□□ 0.23
CMTM3-215ENST00000568477 TOB2Q14106 344 aaPredicted RBP16.46■□□□□ 0.23
CMTM3-215ENST00000568477 NIPA1Q7RTP0 329 aa16.46■□□□□ 0.23
CMTM3-215ENST00000568477 CCDC148Q8NFR7 591 aa16.46■□□□□ 0.23
CMTM3-215ENST00000568477 UPF3BQ9BZI7 483 aaKnown RBP16.46■□□□□ 0.23
CMTM3-215ENST00000568477 AGO4Q9HCK5 861 aaKnown RBP16.46■□□□□ 0.23
CMTM3-215ENST00000568477 CDH23Q9H251 3354 aa16.46■□□□□ 0.23
CMTM3-215ENST00000568477 ABHD14A-ACY1A0A1B0GW23 586 aa16.45■□□□□ 0.22
CMTM3-215ENST00000568477 PPFIA3O75145 1194 aa16.45■□□□□ 0.22
CMTM3-215ENST00000568477 LGR5O75473 907 aa16.45■□□□□ 0.22
CMTM3-215ENST00000568477 CA3P07451 260 aa16.45■□□□□ 0.22
CMTM3-215ENST00000568477 CTSHP09668 335 aa16.45■□□□□ 0.22
CMTM3-215ENST00000568477 MARK3P27448 753 aa16.45■□□□□ 0.22
CMTM3-215ENST00000568477 ADAM17P78536 824 aa16.45■□□□□ 0.22
CMTM3-215ENST00000568477 IKBKEQ14164 716 aa16.45■□□□□ 0.22
CMTM3-215ENST00000568477 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.45■□□□□ 0.22
CMTM3-215ENST00000568477 TRIM22Q8IYM9 498 aa16.45■□□□□ 0.22
CMTM3-215ENST00000568477 BICD2Q8TD16 824 aa16.45■□□□□ 0.22
CMTM3-215ENST00000568477 AZI2Q9H6S1 392 aa16.45■□□□□ 0.22
CMTM3-215ENST00000568477 CPLX1O14810 134 aa16.44■□□□□ 0.22
CMTM3-215ENST00000568477 ACTR2P61160 394 aa16.44■□□□□ 0.22
CMTM3-215ENST00000568477 ITGB3BPQ13352 177 aaPredicted RBP16.44■□□□□ 0.22
CMTM3-215ENST00000568477 TCTN1Q2MV58 587 aa16.44■□□□□ 0.22
CMTM3-215ENST00000568477 PLA2G4DQ86XP0 818 aa16.44■□□□□ 0.22
CMTM3-215ENST00000568477 ZNF274Q96GC6 653 aaPredicted RBP16.44■□□□□ 0.22
CMTM3-215ENST00000568477 PDRG1Q9NUG6 133 aa16.44■□□□□ 0.22
CMTM3-215ENST00000568477 KAT6AQ92794 2004 aa16.44■□□□□ 0.22
CMTM3-215ENST00000568477 A0A0C4DFX4 3053 aa16.43■□□□□ 0.22
CMTM3-215ENST00000568477 TLL1O43897 1013 aa16.43■□□□□ 0.22
CMTM3-215ENST00000568477 CYP3A4P08684 503 aa16.43■□□□□ 0.22
CMTM3-215ENST00000568477 DEFB103AP81534 67 aa16.43■□□□□ 0.22
CMTM3-215ENST00000568477 GRIK4Q16099 956 aa16.43■□□□□ 0.22
CMTM3-215ENST00000568477 TAF2Q6P1X5 1199 aa16.43■□□□□ 0.22
CMTM3-215ENST00000568477 CPLX2Q6PUV4 134 aaKnown RBP16.43■□□□□ 0.22
CMTM3-215ENST00000568477 CRYGNQ8WXF5 182 aa16.43■□□□□ 0.22
CMTM3-215ENST00000568477 PCYT2Q99447 389 aa16.43■□□□□ 0.22
CMTM3-215ENST00000568477 ZBED2Q9BTP6 218 aa16.43■□□□□ 0.22
CMTM3-215ENST00000568477 VPS54Q9P1Q0 977 aa16.43■□□□□ 0.22
CMTM3-215ENST00000568477 TUBE1Q9UJT0 475 aa16.43■□□□□ 0.22
CMTM3-215ENST00000568477 IGLV3-22A0A075B6J6 115 aa16.42■□□□□ 0.22
CMTM3-215ENST00000568477 FAM86B1E9PN63 330 aa16.42■□□□□ 0.22
CMTM3-215ENST00000568477 ADAMTS3O15072 1205 aa16.42■□□□□ 0.22
CMTM3-215ENST00000568477 FAM86B2P0C5J1 330 aa16.42■□□□□ 0.22
CMTM3-215ENST00000568477 SETQ01105 290 aaPredicted RBP16.42■□□□□ 0.22
CMTM3-215ENST00000568477 SSRP1Q08945 709 aaKnown RBP16.42■□□□□ 0.22
CMTM3-215ENST00000568477 ADGRE1Q14246 886 aa16.42■□□□□ 0.22
CMTM3-215ENST00000568477 PLEKHG4Q58EX7 1191 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms