RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 ADAM17P78536 824 aa17.34■□□□□ 0.37
COMMD4-223ENST00000568301 ALYREFQ86V81 257 aaKnown RBP17.34■□□□□ 0.37
COMMD4-223ENST00000568301 ZNF654Q8IZM8 581 aa17.34■□□□□ 0.37
COMMD4-223ENST00000568301 TMTC2Q8N394 836 aa17.34■□□□□ 0.37
COMMD4-223ENST00000568301 GIMAP8Q8ND71 665 aaPredicted RBP17.34■□□□□ 0.37
COMMD4-223ENST00000568301 PIBF1Q8WXW3 757 aa17.34■□□□□ 0.37
COMMD4-223ENST00000568301 TOP1MTQ969P6 601 aa17.34■□□□□ 0.37
COMMD4-223ENST00000568301 SAMD11Q96NU1 681 aa17.34■□□□□ 0.37
COMMD4-223ENST00000568301 LY9Q9HBG7 655 aa17.34■□□□□ 0.37
COMMD4-223ENST00000568301 SETD4Q9NVD3 440 aa17.34■□□□□ 0.37
COMMD4-223ENST00000568301 ZNF215Q9UL58 517 aaPredicted RBP17.34■□□□□ 0.37
COMMD4-223ENST00000568301 UPP2O95045 317 aa17.33■□□□□ 0.36
COMMD4-223ENST00000568301 GNAQP50148 359 aa17.33■□□□□ 0.36
COMMD4-223ENST00000568301 PTPROQ16827 1216 aa17.33■□□□□ 0.36
COMMD4-223ENST00000568301 FAM26DQ5JW98 314 aa17.33■□□□□ 0.36
COMMD4-223ENST00000568301 USP17L6PQ6QN14 398 aa17.33■□□□□ 0.36
COMMD4-223ENST00000568301 NLRX1Q86UT6 975 aa17.33■□□□□ 0.36
COMMD4-223ENST00000568301 APBB2Q92870 758 aa17.33■□□□□ 0.36
COMMD4-223ENST00000568301 SEC63Q9UGP8 760 aaKnown RBP17.33■□□□□ 0.36
COMMD4-223ENST00000568301 MYO7AQ13402 2215 aa17.32■□□□□ 0.36
COMMD4-223ENST00000568301 NRCAMQ92823 1304 aa17.32■□□□□ 0.36
COMMD4-223ENST00000568301 H3BNC9 293 aa17.32■□□□□ 0.36
COMMD4-223ENST00000568301 ALADP13716 330 aa17.32■□□□□ 0.36
COMMD4-223ENST00000568301 GPM6BQ13491 265 aa17.32■□□□□ 0.36
COMMD4-223ENST00000568301 PUS10Q3MIT2 529 aaKnown RBP17.32■□□□□ 0.36
COMMD4-223ENST00000568301 TCEAL5Q5H9L2 206 aa17.32■□□□□ 0.36
COMMD4-223ENST00000568301 BANK1Q8NDB2 785 aa17.32■□□□□ 0.36
COMMD4-223ENST00000568301 UIMC1Q96RL1 719 aa17.32■□□□□ 0.36
COMMD4-223ENST00000568301 YME1L1Q96TA2 773 aa17.32■□□□□ 0.36
COMMD4-223ENST00000568301 SUPT16HQ9Y5B9 1047 aaKnown RBP17.32■□□□□ 0.36
COMMD4-223ENST00000568301 RBM8AQ9Y5S9 174 aaKnown RBP17.32■□□□□ 0.36
COMMD4-223ENST00000568301 NLRC5Q86WI3 1866 aa17.31■□□□□ 0.36
COMMD4-223ENST00000568301 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-223ENST00000568301 MCM5P33992 734 aa17.31■□□□□ 0.36
COMMD4-223ENST00000568301 TIGD5Q53EQ6 642 aa17.31■□□□□ 0.36
COMMD4-223ENST00000568301 CASC1Q6TDU7 716 aa17.31■□□□□ 0.36
COMMD4-223ENST00000568301 EP400NLQ6ZTU2 488 aa17.31■□□□□ 0.36
COMMD4-223ENST00000568301 RPAINQ86UA6 219 aa17.31■□□□□ 0.36
COMMD4-223ENST00000568301 TRIM50Q86XT4 487 aa17.31■□□□□ 0.36
COMMD4-223ENST00000568301 TMEM192Q8IY95 271 aa17.31■□□□□ 0.36
COMMD4-223ENST00000568301 GPRASP2Q96D09 838 aa17.31■□□□□ 0.36
COMMD4-223ENST00000568301 CDHR1Q96JP9 859 aa17.31■□□□□ 0.36
COMMD4-223ENST00000568301 TMEM87BQ96K49 555 aa17.31■□□□□ 0.36
COMMD4-223ENST00000568301 PRC1O43663 620 aa17.3■□□□□ 0.36
COMMD4-223ENST00000568301 CTSHP09668 335 aa17.3■□□□□ 0.36
COMMD4-223ENST00000568301 ARHGAP4P98171 946 aa17.3■□□□□ 0.36
COMMD4-223ENST00000568301 UTP14CQ5TAP6 766 aaKnown RBP17.3■□□□□ 0.36
COMMD4-223ENST00000568301 SRBD1Q8N5C6 995 aaKnown RBP17.3■□□□□ 0.36
COMMD4-223ENST00000568301 LMBR1Q8WVP7 490 aa17.3■□□□□ 0.36
COMMD4-223ENST00000568301 PABPC5Q96DU9 382 aaKnown RBP17.3■□□□□ 0.36
COMMD4-223ENST00000568301 MYL10Q9BUA6 226 aa17.3■□□□□ 0.36
COMMD4-223ENST00000568301 PSTPIP2Q9H939 334 aa17.3■□□□□ 0.36
COMMD4-223ENST00000568301 TELO2Q9Y4R8 837 aa17.3■□□□□ 0.36
COMMD4-223ENST00000568301 COL4A6Q14031 1691 aa17.29■□□□□ 0.36
COMMD4-223ENST00000568301 POTEB3A0JP26 581 aa17.29■□□□□ 0.36
COMMD4-223ENST00000568301 CCDC69A6NI79 296 aa17.29■□□□□ 0.36
COMMD4-223ENST00000568301 MAFGO15525 162 aa17.29■□□□□ 0.36
COMMD4-223ENST00000568301 CALM1P0DP23 149 aa17.29■□□□□ 0.36
COMMD4-223ENST00000568301 CALM2P0DP24 149 aa17.29■□□□□ 0.36
COMMD4-223ENST00000568301 CALM3P0DP25 149 aa17.29■□□□□ 0.36
COMMD4-223ENST00000568301 TCF7P36402 384 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-223ENST00000568301 LIFRP42702 1097 aa17.29■□□□□ 0.36
COMMD4-223ENST00000568301 COL19A1Q14993 1142 aa17.29■□□□□ 0.36
COMMD4-223ENST00000568301 CSPP1Q1MSJ5 1256 aa17.29■□□□□ 0.36
COMMD4-223ENST00000568301 TAF2Q6P1X5 1199 aa17.29■□□□□ 0.36
COMMD4-223ENST00000568301 POTEBQ6S5H4 581 aa17.29■□□□□ 0.36
COMMD4-223ENST00000568301 NFXL1Q6ZNB6 911 aa17.29■□□□□ 0.36
COMMD4-223ENST00000568301 IFIH1Q9BYX4 1025 aaKnown RBP17.29■□□□□ 0.36
COMMD4-223ENST00000568301 RALGAPA2Q2PPJ7 1873 aa17.29■□□□□ 0.36
COMMD4-223ENST00000568301 ATG2AQ2TAZ0 1938 aa17.28■□□□□ 0.36
COMMD4-223ENST00000568301 SH2B2O14492 632 aaPredicted RBP17.28■□□□□ 0.36
COMMD4-223ENST00000568301 DCXO43602 365 aa17.28■□□□□ 0.36
COMMD4-223ENST00000568301 ATP9AO75110 1047 aa17.28■□□□□ 0.36
COMMD4-223ENST00000568301 PLEKHA8P1O95397 391 aa17.28■□□□□ 0.36
COMMD4-223ENST00000568301 CHRNA1P02708 482 aa17.28■□□□□ 0.36
COMMD4-223ENST00000568301 KCNA2P16389 499 aa17.28■□□□□ 0.36
COMMD4-223ENST00000568301 ITGB5P18084 799 aa17.28■□□□□ 0.36
COMMD4-223ENST00000568301 SP4Q02446 784 aa17.28■□□□□ 0.36
COMMD4-223ENST00000568301 ZP2Q05996 745 aa17.28■□□□□ 0.36
COMMD4-223ENST00000568301 SEPT1Q8WYJ6 367 aa17.28■□□□□ 0.36
COMMD4-223ENST00000568301 NSUN3Q9H649 340 aaKnown RBP17.28■□□□□ 0.36
COMMD4-223ENST00000568301 EHMT1Q9H9B1 1298 aa17.28■□□□□ 0.36
COMMD4-223ENST00000568301 CLDND1Q9NY35 253 aa17.28■□□□□ 0.36
COMMD4-223ENST00000568301 ERAP1Q9NZ08 941 aa17.28■□□□□ 0.36
COMMD4-223ENST00000568301 GSTTP1A0A1W2PQM5 241 aa17.27■□□□□ 0.36
COMMD4-223ENST00000568301 LTBRP36941 435 aa17.27■□□□□ 0.36
COMMD4-223ENST00000568301 RSPH3Q86UC2 560 aa17.27■□□□□ 0.36
COMMD4-223ENST00000568301 IL17RAQ96F46 866 aa17.27■□□□□ 0.36
COMMD4-223ENST00000568301 UBIAD1Q9Y5Z9 338 aa17.27■□□□□ 0.36
COMMD4-223ENST00000568301 USP34Q70CQ2 3546 aa17.27■□□□□ 0.35
COMMD4-223ENST00000568301 MBLAC1A4D2B0 266 aaPredicted RBP17.26■□□□□ 0.35
COMMD4-223ENST00000568301 C19orf67A6NJJ6 358 aa17.26■□□□□ 0.35
COMMD4-223ENST00000568301 SPDYE3A6NKU9 549 aa17.26■□□□□ 0.35
COMMD4-223ENST00000568301 RPLP2P05387 115 aaKnown RBP17.26■□□□□ 0.35
COMMD4-223ENST00000568301 PPFIA1Q13136 1202 aa17.26■□□□□ 0.35
COMMD4-223ENST00000568301 MTMR1Q13613 665 aa17.26■□□□□ 0.35
COMMD4-223ENST00000568301 TEX2Q8IWB9 1127 aa17.26■□□□□ 0.35
COMMD4-223ENST00000568301 CMTR1Q8N1G2 835 aaKnown RBP17.26■□□□□ 0.35
COMMD4-223ENST00000568301 FANCBQ8NB91 859 aa17.26■□□□□ 0.35
COMMD4-223ENST00000568301 LSG1Q9H089 658 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms