RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 RPS6KA1Q15418 735 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 CLEC4GQ6UXB4 293 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 LRRC55Q6ZSA7 311 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 KIAA0825Q8IV33 1275 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 IFT20Q8IY31 132 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 DDX4Q9NQI0 724 aaKnown RBP9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 EMILIN3Q9NT22 766 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 USP40Q9NVE5 1235 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 PCDHA1Q9Y5I3 950 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 UBAP1LF5GYI3 381 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 PPP1R11O60927 126 aaPredicted RBP9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 TUBBP07437 444 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 MYBP10242 640 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 CASP4P49662 377 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 CYP2J2P51589 502 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 PTK2Q05397 1052 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 IFT88Q13099 833 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 SFR1Q86XK3 245 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 RPGRIP1Q96KN7 1286 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 AMACRQ9UHK6 382 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 NARFQ9UHQ1 456 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 ZBTB21Q9ULJ3 1066 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 ZBTB39O15060 712 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 DHX9Q08211 1270 aaKnown RBP9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 NFIAQ12857 509 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 TRAPPC3LQ5T215 181 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 DAAM2Q86T65 1068 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 TADA2BQ86TJ2 420 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 CCDC65Q8IXS2 484 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 OTUD6BQ8N6M0 293 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 NEDD1Q8NHV4 660 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 CYP2W1Q8TAV3 490 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 CUL5Q93034 780 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 JMJD4Q9H9V9 463 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 RGL1Q9NZL6 768 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 HDAC9Q9UKV0 1011 aa9.84□□□□□ -0.83
HDGFL3-206ENST00000568294 TARSL2A2RTX5 802 aaKnown RBP9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 LAD1O00515 517 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 CTNNA1P35221 906 aaKnown RBP9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 TUBB4BP68371 445 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 IFFO1Q0D2I5 559 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 GRAPQ13588 217 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 TAX1BP1Q86VP1 789 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 ZFPM1Q8IX07 1006 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 GUF1Q8N442 669 aaKnown RBP9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 GRAPLQ8TC17 118 aaPredicted RBP9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 PPM1EQ8WY54 764 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 TRIM51Q9BSJ1 452 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 SPZ1Q9BXG8 430 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 SCAF8Q9UPN6 1271 aaKnown RBP9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 ZC3H4Q9UPT8 1303 aaKnown RBP9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 MYH3P11055 1940 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 KRIT1O00522 736 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 CETN3O15182 167 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 MED24O75448 989 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 KRT13P13646 458 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 PRPHP41219 470 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 PAK2Q13177 524 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 CTTNQ14247 550 aaKnown RBP9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 PHLDB2Q86SQ0 1253 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 ZNF622Q969S3 477 aaKnown RBP eCLIP9.83□□□□□ -0.844e-6■■□□□ 13.5
HDGFL3-206ENST00000568294 BHMT2Q9H2M3 363 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 CUEDC2Q9H467 287 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 DBNDD1Q9H9R9 158 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 DAGLAQ9Y4D2 1042 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 EIF3HO15372 352 aaKnown RBP eCLIP9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 TRIM49P0CI25 452 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 TRIM49CP0CI26 452 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 NR1D1P20393 614 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 AARSP49588 968 aaKnown RBP eCLIP9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 CORO7P57737 925 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 HDLBPQ00341 1268 aaKnown RBP9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 C16orf86Q6ZW13 317 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 PEX26Q7Z412 305 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 KAT2BQ92831 832 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 HAS1Q92839 578 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 VIPAS39Q9H9C1 493 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 LUC7LQ9NQ29 371 aaKnown RBP9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 MTMR4Q9NYA4 1195 aa9.83□□□□□ -0.84
HDGFL3-206ENST00000568294 BCL9LQ86UU0 1499 aa9.82□□□□□ -0.84
HDGFL3-206ENST00000568294 GRID2IPA4D2P6 1211 aa9.82□□□□□ -0.84
HDGFL3-206ENST00000568294 ZNF233A6NK53 670 aa9.82□□□□□ -0.84
HDGFL3-206ENST00000568294 DAPK3O43293 454 aa9.82□□□□□ -0.84
HDGFL3-206ENST00000568294 SERPING1P05155 500 aa9.82□□□□□ -0.84
HDGFL3-206ENST00000568294 FLT3P36888 993 aa9.82□□□□□ -0.84
HDGFL3-206ENST00000568294 SLCO1A2P46721 670 aa9.82□□□□□ -0.84
HDGFL3-206ENST00000568294 ZC2HC1CQ53FD0 456 aaPredicted RBP9.82□□□□□ -0.84
HDGFL3-206ENST00000568294 HGSNATQ68CP4 663 aa9.82□□□□□ -0.84
HDGFL3-206ENST00000568294 GALNT17Q6IS24 598 aa9.82□□□□□ -0.84
HDGFL3-206ENST00000568294 ZNF746Q6NUN9 644 aaPredicted RBP9.82□□□□□ -0.84
HDGFL3-206ENST00000568294 CCDC25Q86WR0 208 aa9.82□□□□□ -0.84
HDGFL3-206ENST00000568294 TPH2Q8IWU9 490 aa9.82□□□□□ -0.84
HDGFL3-206ENST00000568294 SCFD1Q8WVM8 642 aa9.82□□□□□ -0.84
HDGFL3-206ENST00000568294 SELENOSQ9BQE4 189 aa9.82□□□□□ -0.84
HDGFL3-206ENST00000568294 KCNQ5Q9NR82 932 aa9.82□□□□□ -0.84
HDGFL3-206ENST00000568294 POLLQ9UGP5 575 aa9.82□□□□□ -0.84
HDGFL3-206ENST00000568294 ARMCX3Q9UH62 379 aaPredicted RBP9.82□□□□□ -0.84
HDGFL3-206ENST00000568294 AJAP1Q9UKB5 411 aaPredicted RBP9.82□□□□□ -0.84
HDGFL3-206ENST00000568294 ATP8A1Q9Y2Q0 1164 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms