RNA–Protein interactions for RNA: ENST00000567988.5

FANCA-229, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-229ENST00000567988 TBCKQ8TEA7 893 aa13.99□□□□□ -0.17
FANCA-229ENST00000567988 SEPT1Q8WYJ6 367 aa13.99□□□□□ -0.17
FANCA-229ENST00000567988 WNT8BQ93098 351 aa13.99□□□□□ -0.17
FANCA-229ENST00000567988 ZSCAN31Q96LW9 406 aaPredicted RBP13.99□□□□□ -0.17
FANCA-229ENST00000567988 LLPHQ9BRT6 129 aaKnown RBP13.99□□□□□ -0.17
FANCA-229ENST00000567988 ALG1Q9BT22 464 aa13.99□□□□□ -0.17
FANCA-229ENST00000567988 TUT1Q9H6E5 874 aaKnown RBP13.99□□□□□ -0.17
FANCA-229ENST00000567988 JPH1Q9HDC5 661 aaPredicted RBP13.99□□□□□ -0.17
FANCA-229ENST00000567988 TANC1Q9C0D5 1861 aa13.98□□□□□ -0.17
FANCA-229ENST00000567988 SUPT20HL2P0C7V6 817 aa13.98□□□□□ -0.17
FANCA-229ENST00000567988 CYP2C18P33260 490 aa13.98□□□□□ -0.17
FANCA-229ENST00000567988 TCF7P36402 384 aaPredicted RBP13.98□□□□□ -0.17
FANCA-229ENST00000567988 SETQ01105 290 aaPredicted RBP13.98□□□□□ -0.17
FANCA-229ENST00000567988 Q4G0T1 1027 aa13.98□□□□□ -0.17
FANCA-229ENST00000567988 ABHD15Q6UXT9 468 aa13.98□□□□□ -0.17
FANCA-229ENST00000567988 PLA2G4DQ86XP0 818 aa13.98□□□□□ -0.17
FANCA-229ENST00000567988 UBE2OQ9C0C9 1292 aaKnown RBP13.98□□□□□ -0.17
FANCA-229ENST00000567988 HIPK3Q9H422 1215 aa13.98□□□□□ -0.17
FANCA-229ENST00000567988 SH2B1Q9NRF2 756 aaPredicted RBP13.98□□□□□ -0.17
FANCA-229ENST00000567988 CHD7Q9P2D1 2997 aa13.98□□□□□ -0.17
FANCA-229ENST00000567988 SLC9A2Q9UBY0 812 aa13.98□□□□□ -0.17
FANCA-229ENST00000567988 IPO5O00410 1097 aaKnown RBP13.97□□□□□ -0.17
FANCA-229ENST00000567988 NOP56O00567 594 aaKnown RBP13.97□□□□□ -0.17
FANCA-229ENST00000567988 MSH4O15457 936 aa13.97□□□□□ -0.17
FANCA-229ENST00000567988 MMP1P03956 469 aa13.97□□□□□ -0.17
FANCA-229ENST00000567988 CSF2RAP15509 400 aa13.97□□□□□ -0.17
FANCA-229ENST00000567988 ACTR2P61160 394 aa13.97□□□□□ -0.17
FANCA-229ENST00000567988 ZNF200P98182 395 aaPredicted RBP13.97□□□□□ -0.17
FANCA-229ENST00000567988 FPGSQ05932 587 aa13.97□□□□□ -0.17
FANCA-229ENST00000567988 SHHQ15465 462 aa13.97□□□□□ -0.17
FANCA-229ENST00000567988 KRT25Q7Z3Z0 450 aa13.97□□□□□ -0.17
FANCA-229ENST00000567988 SERINC5Q86VE9 423 aa13.97□□□□□ -0.17
FANCA-229ENST00000567988 CCDC83Q8IWF9 413 aa13.97□□□□□ -0.17
FANCA-229ENST00000567988 ETNPPLQ8TBG4 499 aa13.97□□□□□ -0.17
FANCA-229ENST00000567988 WASF1Q92558 559 aa13.97□□□□□ -0.17
FANCA-229ENST00000567988 SLC5A5Q92911 643 aa13.97□□□□□ -0.17
FANCA-229ENST00000567988 LBHD1Q9BQE6 289 aaPredicted RBP13.97□□□□□ -0.17
FANCA-229ENST00000567988 PPP1R12CQ9BZL4 782 aa13.97□□□□□ -0.17
FANCA-229ENST00000567988 RNPEPQ9H4A4 650 aa13.97□□□□□ -0.17
FANCA-229ENST00000567988 PKD2L1Q9P0L9 805 aa13.97□□□□□ -0.17
FANCA-229ENST00000567988 FAM205CA6NFA0 338 aa13.96□□□□□ -0.17
FANCA-229ENST00000567988 TDP2O95551 362 aa13.96□□□□□ -0.17
FANCA-229ENST00000567988 SMIM10L2AP0DMW4 78 aa13.96□□□□□ -0.17
FANCA-229ENST00000567988 SMIM10L2BP0DMW5 78 aa13.96□□□□□ -0.17
FANCA-229ENST00000567988 NR5A1Q13285 461 aa13.96□□□□□ -0.17
FANCA-229ENST00000567988 PTK7Q13308 1070 aa13.96□□□□□ -0.17
FANCA-229ENST00000567988 NONOQ15233 471 aaKnown RBP eCLIP13.96□□□□□ -0.173e-9■■□□□ 12.8
FANCA-229ENST00000567988 PTGISQ16647 500 aa13.96□□□□□ -0.17
FANCA-229ENST00000567988 TMEM240Q5SV17 173 aa13.96□□□□□ -0.17
FANCA-229ENST00000567988 C7orf31Q8N865 590 aa13.96□□□□□ -0.17
FANCA-229ENST00000567988 CAGE1Q8TC20 777 aa13.96□□□□□ -0.17
FANCA-229ENST00000567988 AFAP1L1Q8TED9 768 aa13.96□□□□□ -0.17
FANCA-229ENST00000567988 KCNMB3Q9NPA1 279 aa13.96□□□□□ -0.17
FANCA-229ENST00000567988 MBLAC1A4D2B0 266 aaPredicted RBP13.95□□□□□ -0.18
FANCA-229ENST00000567988 SLC37A4O43826 429 aa13.95□□□□□ -0.18
FANCA-229ENST00000567988 PSMD10O75832 226 aa13.95□□□□□ -0.18
FANCA-229ENST00000567988 SP4Q02446 784 aa13.95□□□□□ -0.18
FANCA-229ENST00000567988 MBTPS1Q14703 1052 aa13.95□□□□□ -0.18
FANCA-229ENST00000567988 INF2Q27J81 1249 aa13.95□□□□□ -0.18
FANCA-229ENST00000567988 PRR16Q569H4 304 aa13.95□□□□□ -0.18
FANCA-229ENST00000567988 FAM47CQ5HY64 1035 aa13.95□□□□□ -0.18
FANCA-229ENST00000567988 MARCH8Q5T0T0 291 aa13.95□□□□□ -0.18
FANCA-229ENST00000567988 KRT40Q6A162 431 aa13.95□□□□□ -0.18
FANCA-229ENST00000567988 PPP4R3AQ6IN85 833 aa13.95□□□□□ -0.18
FANCA-229ENST00000567988 ZNF746Q6NUN9 644 aaPredicted RBP13.95□□□□□ -0.18
FANCA-229ENST00000567988 PLPPR4Q7Z2D5 763 aa13.95□□□□□ -0.18
FANCA-229ENST00000567988 LMBR1Q8WVP7 490 aa13.95□□□□□ -0.18
FANCA-229ENST00000567988 TMX3Q96JJ7 454 aa13.95□□□□□ -0.18
FANCA-229ENST00000567988 RIT2Q99578 217 aa13.95□□□□□ -0.18
FANCA-229ENST00000567988 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.95□□□□□ -0.183e-11■□□□□ 10.3
FANCA-229ENST00000567988 ZNF577Q9BSK1 485 aa13.95□□□□□ -0.18
FANCA-229ENST00000567988 IL23AQ9NPF7 189 aa13.95□□□□□ -0.18
FANCA-229ENST00000567988 TBC1D22BQ9NU19 505 aa13.95□□□□□ -0.18
FANCA-229ENST00000567988 WNT7AO00755 349 aa13.94□□□□□ -0.18
FANCA-229ENST00000567988 IQCF3P0C7M6 154 aa13.94□□□□□ -0.18
FANCA-229ENST00000567988 XBP1P17861 261 aa13.94□□□□□ -0.18
FANCA-229ENST00000567988 ATP4AP20648 1035 aa13.94□□□□□ -0.18
FANCA-229ENST00000567988 ZNF76P36508 570 aa13.94□□□□□ -0.18
FANCA-229ENST00000567988 PPIGQ13427 754 aaKnown RBP eCLIP13.94□□□□□ -0.182e-13■■■□□ 17.6
FANCA-229ENST00000567988 MKRN4PQ13434 485 aaPredicted RBP13.94□□□□□ -0.18
FANCA-229ENST00000567988 UTP14CQ5TAP6 766 aaKnown RBP13.94□□□□□ -0.18
FANCA-229ENST00000567988 RPAINQ86UA6 219 aa13.94□□□□□ -0.18
FANCA-229ENST00000567988 CCDC60Q8IWA6 550 aaPredicted RBP13.94□□□□□ -0.18
FANCA-229ENST00000567988 TMEM199Q8N511 208 aa13.94□□□□□ -0.18
FANCA-229ENST00000567988 SCLYQ96I15 445 aa13.94□□□□□ -0.18
FANCA-229ENST00000567988 SDF4Q9BRK5 362 aa13.94□□□□□ -0.18
FANCA-229ENST00000567988 SMARCAD1Q9H4L7 1026 aa13.94□□□□□ -0.18
FANCA-229ENST00000567988 UPF2Q9HAU5 1272 aaKnown RBP13.94□□□□□ -0.18
FANCA-229ENST00000567988 ERAP1Q9NZ08 941 aa13.94□□□□□ -0.18
FANCA-229ENST00000567988 ZNF215Q9UL58 517 aaPredicted RBP13.94□□□□□ -0.18
FANCA-229ENST00000567988 MAFBQ9Y5Q3 323 aaPredicted RBP13.94□□□□□ -0.18
FANCA-229ENST00000567988 COL6A3P12111 3177 aa13.94□□□□□ -0.18
FANCA-229ENST00000567988 NRCAMQ92823 1304 aa13.93□□□□□ -0.18
FANCA-229ENST00000567988 IGSF9BQ9UPX0 1349 aa13.93□□□□□ -0.18
FANCA-229ENST00000567988 C17orf102A2RUQ5 167 aa13.93□□□□□ -0.18
FANCA-229ENST00000567988 ZBTB42B2RXF5 422 aa13.93□□□□□ -0.18
FANCA-229ENST00000567988 BTBD18B2RXH4 712 aa13.93□□□□□ -0.18
FANCA-229ENST00000567988 TREHO43280 583 aa13.93□□□□□ -0.18
FANCA-229ENST00000567988 ST18O60284 1047 aa13.93□□□□□ -0.18
FANCA-229ENST00000567988 CXCL10P02778 98 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms