RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 SH3D19Q5HYK7 790 aa16.34■□□□□ 0.21
COMMD4-221ENST00000567935 SPATA1Q5VX52 437 aa16.34■□□□□ 0.21
COMMD4-221ENST00000567935 GPAT2Q6NUI2 795 aa16.34■□□□□ 0.21
COMMD4-221ENST00000567935 MYLIPQ8WY64 445 aa16.34■□□□□ 0.21
COMMD4-221ENST00000567935 IMPACTQ9P2X3 320 aa16.34■□□□□ 0.21
COMMD4-221ENST00000567935 PFASO15067 1338 aa16.34■□□□□ 0.21
COMMD4-221ENST00000567935 ZNF536O15090 1300 aa16.34■□□□□ 0.21
COMMD4-221ENST00000567935 PARP14Q460N5 1801 aa16.33■□□□□ 0.21
COMMD4-221ENST00000567935 PVALEFA0A1B0GWK0 134 aa16.33■□□□□ 0.2
COMMD4-221ENST00000567935 TNPO2O14787 897 aaKnown RBP16.33■□□□□ 0.2
COMMD4-221ENST00000567935 HOXA13P31271 388 aaPredicted RBP16.33■□□□□ 0.2
COMMD4-221ENST00000567935 GSDMDP57764 484 aa16.33■□□□□ 0.2
COMMD4-221ENST00000567935 FANCCQ00597 558 aa16.33■□□□□ 0.2
COMMD4-221ENST00000567935 TKFCQ3LXA3 575 aa16.33■□□□□ 0.2
COMMD4-221ENST00000567935 COBLL1Q53SF7 1204 aa16.33■□□□□ 0.2
COMMD4-221ENST00000567935 PRR16Q569H4 304 aa16.33■□□□□ 0.2
COMMD4-221ENST00000567935 NIPA1Q7RTP0 329 aa16.33■□□□□ 0.2
COMMD4-221ENST00000567935 FCHSD1Q86WN1 690 aa16.33■□□□□ 0.2
COMMD4-221ENST00000567935 LARP4BQ92615 738 aaKnown RBP16.33■□□□□ 0.2
COMMD4-221ENST00000567935 LENG9Q96B70 501 aa16.33■□□□□ 0.2
COMMD4-221ENST00000567935 P2RX7Q99572 595 aaKnown RBP16.33■□□□□ 0.2
COMMD4-221ENST00000567935 TRIM9Q9C026 710 aa16.33■□□□□ 0.2
COMMD4-221ENST00000567935 BLZF1Q9H2G9 400 aa16.33■□□□□ 0.2
COMMD4-221ENST00000567935 RWDD2AQ9UIY3 292 aa16.33■□□□□ 0.2
COMMD4-221ENST00000567935 NFE2L3Q9Y4A8 694 aa16.33■□□□□ 0.2
COMMD4-221ENST00000567935 ZHX2Q9Y6X8 837 aa16.33■□□□□ 0.2
COMMD4-221ENST00000567935 SYNRGQ9UMZ2 1314 aa16.33■□□□□ 0.2
COMMD4-221ENST00000567935 SMCHD1A6NHR9 2005 aa16.33■□□□□ 0.2
COMMD4-221ENST00000567935 POTEMA6NI47 508 aa16.32■□□□□ 0.2
COMMD4-221ENST00000567935 PPP1R3GB7ZBB8 358 aa16.32■□□□□ 0.2
COMMD4-221ENST00000567935 ZNF18P17022 549 aa16.32■□□□□ 0.2
COMMD4-221ENST00000567935 MUTP22033 750 aa16.32■□□□□ 0.2
COMMD4-221ENST00000567935 CLEC4DQ8WXI8 215 aa16.32■□□□□ 0.2
COMMD4-221ENST00000567935 RAD54LQ92698 747 aa16.32■□□□□ 0.2
COMMD4-221ENST00000567935 PNMA5Q96PV4 448 aa16.32■□□□□ 0.2
COMMD4-221ENST00000567935 SEMA6BQ9H3T3 888 aa16.32■□□□□ 0.2
COMMD4-221ENST00000567935 AFG3L2Q9Y4W6 797 aa16.32■□□□□ 0.2
COMMD4-221ENST00000567935 FRMPD4Q14CM0 1322 aa16.31■□□□□ 0.2
COMMD4-221ENST00000567935 FAM86B1E9PN63 330 aa16.31■□□□□ 0.2
COMMD4-221ENST00000567935 VWA5AO00534 786 aa16.31■□□□□ 0.2
COMMD4-221ENST00000567935 ATP2A1O14983 1001 aa16.31■□□□□ 0.2
COMMD4-221ENST00000567935 KLRC4O43908 158 aa16.31■□□□□ 0.2
COMMD4-221ENST00000567935 FAM86B2P0C5J1 330 aa16.31■□□□□ 0.2
COMMD4-221ENST00000567935 CCT6AP40227 531 aaKnown RBP16.31■□□□□ 0.2
COMMD4-221ENST00000567935 SPAG1Q07617 926 aa16.31■□□□□ 0.2
COMMD4-221ENST00000567935 TRIM32Q13049 653 aa16.31■□□□□ 0.2
COMMD4-221ENST00000567935 PAK1Q13153 545 aa16.31■□□□□ 0.2
COMMD4-221ENST00000567935 COG2Q14746 738 aa16.31■□□□□ 0.2
COMMD4-221ENST00000567935 CEP55Q53EZ4 464 aa16.31■□□□□ 0.2
COMMD4-221ENST00000567935 TJAP1Q5JTD0 557 aa16.31■□□□□ 0.2
COMMD4-221ENST00000567935 GIMAP8Q8ND71 665 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-221ENST00000567935 STAMQ92783 540 aa16.31■□□□□ 0.2
COMMD4-221ENST00000567935 AGBL1Q96MI9 1066 aa16.31■□□□□ 0.2
COMMD4-221ENST00000567935 WDR11Q9BZH6 1224 aa16.31■□□□□ 0.2
COMMD4-221ENST00000567935 HSD3B7Q9H2F3 369 aa16.31■□□□□ 0.2
COMMD4-221ENST00000567935 BMP2KQ9NSY1 1161 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-221ENST00000567935 BLOC1S4Q9NUP1 217 aa16.31■□□□□ 0.2
COMMD4-221ENST00000567935 EXOC1Q9NV70 894 aa16.31■□□□□ 0.2
COMMD4-221ENST00000567935 FANCLQ9NW38 375 aa16.31■□□□□ 0.2
COMMD4-221ENST00000567935 IFNKQ9P0W0 207 aa16.31■□□□□ 0.2
COMMD4-221ENST00000567935 ADAMTS5Q9UNA0 930 aa16.31■□□□□ 0.2
COMMD4-221ENST00000567935 IGLV3-22A0A075B6J6 115 aa16.3■□□□□ 0.2
COMMD4-221ENST00000567935 PSMA7O14818 248 aa16.3■□□□□ 0.2
COMMD4-221ENST00000567935 ZNF500O60304 480 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-221ENST00000567935 SERPINC1P01008 464 aa16.3■□□□□ 0.2
COMMD4-221ENST00000567935 RPA1P27694 616 aa16.3■□□□□ 0.2
COMMD4-221ENST00000567935 CASP1P29466 404 aa16.3■□□□□ 0.2
COMMD4-221ENST00000567935 DSG3P32926 999 aa16.3■□□□□ 0.2
COMMD4-221ENST00000567935 CLCN1P35523 988 aa16.3■□□□□ 0.2
COMMD4-221ENST00000567935 UBASH3AP57075 661 aa16.3■□□□□ 0.2
COMMD4-221ENST00000567935 ASIC1P78348 528 aa16.3■□□□□ 0.2
COMMD4-221ENST00000567935 SPIRE1Q08AE8 756 aa16.3■□□□□ 0.2
COMMD4-221ENST00000567935 PSMD2Q13200 908 aa16.3■□□□□ 0.2
COMMD4-221ENST00000567935 KMT5BQ4FZB7 885 aa16.3■□□□□ 0.2
COMMD4-221ENST00000567935 XRRA1Q6P2D8 792 aa16.3■□□□□ 0.2
COMMD4-221ENST00000567935 UNC13DQ70J99 1090 aa16.3■□□□□ 0.2
COMMD4-221ENST00000567935 ADSSL1Q8N142 457 aa16.3■□□□□ 0.2
COMMD4-221ENST00000567935 SPC24Q8NBT2 197 aa16.3■□□□□ 0.2
COMMD4-221ENST00000567935 NOC3LQ8WTT2 800 aaKnown RBP16.3■□□□□ 0.2
COMMD4-221ENST00000567935 DHTKD1Q96HY7 919 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-221ENST00000567935 CTAGE1Q96RT6 745 aa16.3■□□□□ 0.2
COMMD4-221ENST00000567935 XPO4Q9C0E2 1151 aaKnown RBP16.3■□□□□ 0.2
COMMD4-221ENST00000567935 HOXC10Q9NYD6 342 aa16.3■□□□□ 0.2
COMMD4-221ENST00000567935 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.3■□□□□ 0.2
COMMD4-221ENST00000567935 MEIS1O00470 390 aa16.29■□□□□ 0.2
COMMD4-221ENST00000567935 MSH4O15457 936 aa16.29■□□□□ 0.2
COMMD4-221ENST00000567935 ALAS1P13196 640 aa16.29■□□□□ 0.2
COMMD4-221ENST00000567935 CDK11BP21127 795 aaKnown RBP16.29■□□□□ 0.2
COMMD4-221ENST00000567935 HMGCS2P54868 508 aa16.29■□□□□ 0.2
COMMD4-221ENST00000567935 TPD52L1Q16890 204 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-221ENST00000567935 LRRC26Q2I0M4 334 aa16.29■□□□□ 0.2
COMMD4-221ENST00000567935 FOXR2Q6PJQ5 311 aa16.29■□□□□ 0.2
COMMD4-221ENST00000567935 SAMD1Q6SPF0 538 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-221ENST00000567935 CATSPERGQ6ZRH7 1159 aa16.29■□□□□ 0.2
COMMD4-221ENST00000567935 ANKRD20A12PQ8NF67 263 aa16.29■□□□□ 0.2
COMMD4-221ENST00000567935 SLC5A5Q92911 643 aa16.29■□□□□ 0.2
COMMD4-221ENST00000567935 PLIN2Q99541 437 aa16.29■□□□□ 0.2
COMMD4-221ENST00000567935 RIT2Q99578 217 aa16.29■□□□□ 0.2
COMMD4-221ENST00000567935 POLR3CQ9BUI4 534 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-221ENST00000567935 TTYH1Q9H313 450 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms