RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 SETD4Q9NVD3 440 aa21.31■■□□□ 1
LINC01238-205ENST00000567549 SIP14410 1827 aa21.3■■□□□ 1
LINC01238-205ENST00000567549 CCDC196A0A1B0GTZ2 297 aa21.3■■□□□ 1
LINC01238-205ENST00000567549 LINC01553A4QN01 128 aa21.3■■□□□ 1
LINC01238-205ENST00000567549 RFXAPO00287 272 aa21.3■■□□□ 1
LINC01238-205ENST00000567549 RXRAP19793 462 aa21.3■■□□□ 1
LINC01238-205ENST00000567549 RCAN1P53805 252 aa21.3■■□□□ 1
LINC01238-205ENST00000567549 NAPAP54920 295 aa21.3■■□□□ 1
LINC01238-205ENST00000567549 FGD1P98174 961 aa21.3■■□□□ 1
LINC01238-205ENST00000567549 MBTPS1Q14703 1052 aa21.3■■□□□ 1
LINC01238-205ENST00000567549 MCTP2Q6DN12 878 aa21.3■■□□□ 1
LINC01238-205ENST00000567549 FAM43BQ6ZT52 329 aaPredicted RBP21.3■■□□□ 1
LINC01238-205ENST00000567549 CCDC82Q8N4S0 544 aa21.3■■□□□ 1
LINC01238-205ENST00000567549 LMBR1Q8WVP7 490 aa21.3■■□□□ 1
LINC01238-205ENST00000567549 WNT8BQ93098 351 aa21.3■■□□□ 1
LINC01238-205ENST00000567549 YME1L1Q96TA2 773 aa21.3■■□□□ 1
LINC01238-205ENST00000567549 SDF4Q9BRK5 362 aa21.3■■□□□ 1
LINC01238-205ENST00000567549 PCDHA6Q9UN73 950 aa21.3■■□□□ 1
LINC01238-205ENST00000567549 PCDHA8Q9Y5H6 950 aa21.3■■□□□ 1
LINC01238-205ENST00000567549 DOCK5Q9H7D0 1870 aa21.3■■□□□ 1
LINC01238-205ENST00000567549 VCANP13611 3396 aa21.29■■□□□ 1
LINC01238-205ENST00000567549 RRN3P2A6NIE6 340 aa21.29■■□□□ 1
LINC01238-205ENST00000567549 ZBTB43O43298 467 aa21.29■■□□□ 1
LINC01238-205ENST00000567549 CTSHP09668 335 aa21.29■■□□□ 1
LINC01238-205ENST00000567549 PPFIA1Q13136 1202 aa21.29■■□□□ 1
LINC01238-205ENST00000567549 RTN1Q16799 776 aa21.29■■□□□ 1
LINC01238-205ENST00000567549 FAM26DQ5JW98 314 aa21.29■■□□□ 1
LINC01238-205ENST00000567549 APOA5Q6Q788 366 aa21.29■■□□□ 1
LINC01238-205ENST00000567549 DHX32Q7L7V1 743 aaKnown RBP21.29■■□□□ 1
LINC01238-205ENST00000567549 FBXO22Q8NEZ5 403 aa21.29■■□□□ 1
LINC01238-205ENST00000567549 IFIH1Q9BYX4 1025 aaKnown RBP21.29■■□□□ 1
LINC01238-205ENST00000567549 JADE2Q9NQC1 790 aa21.29■■□□□ 1
LINC01238-205ENST00000567549 UBIAD1Q9Y5Z9 338 aa21.29■■□□□ 1
LINC01238-205ENST00000567549 TRANK1O15050 2925 aa21.28■■□□□ 1
LINC01238-205ENST00000567549 LCHNA4D1U4 455 aa21.28■■□□□ 1
LINC01238-205ENST00000567549 EPOPA6NHQ4 379 aa21.28■■□□□ 1
LINC01238-205ENST00000567549 M0QZ92 97 aa21.28■■□□□ 1
LINC01238-205ENST00000567549 CDC45O75419 566 aa21.28■■□□□ 1
LINC01238-205ENST00000567549 KCNA2P16389 499 aa21.28■■□□□ 1
LINC01238-205ENST00000567549 HTRA4P83105 476 aaPredicted RBP21.28■■□□□ 1
LINC01238-205ENST00000567549 AP3B2Q13367 1082 aa21.28■■□□□ 1
LINC01238-205ENST00000567549 FAM117BQ6P1L5 589 aa21.28■■□□□ 1
LINC01238-205ENST00000567549 TRIM50Q86XT4 487 aa21.28■■□□□ 1
LINC01238-205ENST00000567549 JPH1Q9HDC5 661 aaPredicted RBP21.28■■□□□ 1
LINC01238-205ENST00000567549 TUBE1Q9UJT0 475 aa21.28■■□□□ 1
LINC01238-205ENST00000567549 RWDD3Q9Y3V2 267 aa21.28■■□□□ 1
LINC01238-205ENST00000567549 NCOR1O75376 2440 aa21.28■■□□□ 1
LINC01238-205ENST00000567549 COL4A4P53420 1690 aaPredicted RBP21.28■■□□□ 1
LINC01238-205ENST00000567549 ITGB5P18084 799 aa21.27■■□□□ 1
LINC01238-205ENST00000567549 ADCY7P51828 1080 aa21.27■■□□□ 1
LINC01238-205ENST00000567549 ADAM17P78536 824 aa21.27■■□□□ 1
LINC01238-205ENST00000567549 HIC1Q14526 733 aa21.27■■□□□ 1
LINC01238-205ENST00000567549 TSGA10IPQ3SY00 556 aa21.27■■□□□ 1
LINC01238-205ENST00000567549 CMTR1Q8N1G2 835 aaKnown RBP21.27■■□□□ 1
LINC01238-205ENST00000567549 PIAS4Q8N2W9 510 aaPredicted RBP21.27■■□□□ 1
LINC01238-205ENST00000567549 CCDC12Q8WUD4 166 aaPredicted RBP21.27■■□□□ 1
LINC01238-205ENST00000567549 TOP1MTQ969P6 601 aa21.27■■□□□ 1
LINC01238-205ENST00000567549 RIC8AQ9NPQ8 531 aa21.27■■□□□ 1
LINC01238-205ENST00000567549 SLC9A2Q9UBY0 812 aa21.27■■□□□ 1
LINC01238-205ENST00000567549 MTUS1Q9ULD2 1270 aa21.27■■□□□ 1
LINC01238-205ENST00000567549 BMP1P13497 986 aa21.26■□□□□ 0.99
LINC01238-205ENST00000567549 SLC26A2P50443 739 aa21.26■□□□□ 0.99
LINC01238-205ENST00000567549 UBE2SQ16763 222 aa21.26■□□□□ 0.99
LINC01238-205ENST00000567549 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.26■□□□□ 0.99
LINC01238-205ENST00000567549 TMCO2Q7Z6W1 182 aaPredicted RBP21.26■□□□□ 0.99
LINC01238-205ENST00000567549 SP7Q8TDD2 431 aaPredicted RBP21.26■□□□□ 0.99
LINC01238-205ENST00000567549 GDPD5Q8WTR4 605 aa21.26■□□□□ 0.99
LINC01238-205ENST00000567549 MXRA8Q9BRK3 442 aa21.26■□□□□ 0.99
LINC01238-205ENST00000567549 LRRC2Q9BYS8 371 aa21.26■□□□□ 0.99
LINC01238-205ENST00000567549 BCAS3Q9H6U6 928 aa21.26■□□□□ 0.99
LINC01238-205ENST00000567549 SUGCTQ9HAC7 445 aa21.26■□□□□ 0.99
LINC01238-205ENST00000567549 NFASCO94856 1347 aa21.26■□□□□ 0.99
LINC01238-205ENST00000567549 COL4A6Q14031 1691 aa21.25■□□□□ 0.99
LINC01238-205ENST00000567549 GOLGA8AA7E2F4 631 aa21.25■□□□□ 0.99
LINC01238-205ENST00000567549 GOLGA8BA8MQT2 603 aa21.25■□□□□ 0.99
LINC01238-205ENST00000567549 ARHGEF15O94989 841 aa21.25■□□□□ 0.99
LINC01238-205ENST00000567549 GRIK4Q16099 956 aa21.25■□□□□ 0.99
LINC01238-205ENST00000567549 TIGD5Q53EQ6 642 aa21.25■□□□□ 0.99
LINC01238-205ENST00000567549 IER5Q5VY09 327 aa21.25■□□□□ 0.99
LINC01238-205ENST00000567549 ERICH6BQ5W0A0 696 aa21.25■□□□□ 0.99
LINC01238-205ENST00000567549 C1QTNF1Q9BXJ1 281 aa21.25■□□□□ 0.99
LINC01238-205ENST00000567549 RNF216Q9NWF9 866 aaPredicted RBP21.25■□□□□ 0.99
LINC01238-205ENST00000567549 TCEAL9Q9UHQ7 104 aa21.25■□□□□ 0.99
LINC01238-205ENST00000567549 CNTNAP5Q8WYK1 1306 aa21.25■□□□□ 0.99
LINC01238-205ENST00000567549 LPXNO60711 386 aa21.24■□□□□ 0.99
LINC01238-205ENST00000567549 ZNF76P36508 570 aa21.24■□□□□ 0.99
LINC01238-205ENST00000567549 TFF2Q03403 129 aa21.24■□□□□ 0.99
LINC01238-205ENST00000567549 MKRN4PQ13434 485 aaPredicted RBP21.24■□□□□ 0.99
LINC01238-205ENST00000567549 KCNH7Q9NS40 1196 aa21.24■□□□□ 0.99
LINC01238-205ENST00000567549 BARHL2Q9NY43 387 aa21.24■□□□□ 0.99
LINC01238-205ENST00000567549 SQORQ9Y6N5 450 aa21.24■□□□□ 0.99
LINC01238-205ENST00000567549 hCG_1642624A0A1W2PR95 340 aa21.23■□□□□ 0.99
LINC01238-205ENST00000567549 MBLAC1A4D2B0 266 aaPredicted RBP21.23■□□□□ 0.99
LINC01238-205ENST00000567549 ATP9AO75110 1047 aa21.23■□□□□ 0.99
LINC01238-205ENST00000567549 UPP2O95045 317 aa21.23■□□□□ 0.99
LINC01238-205ENST00000567549 MARK3P27448 753 aa21.23■□□□□ 0.99
LINC01238-205ENST00000567549 EXOSC10Q01780 885 aaKnown RBP21.23■□□□□ 0.99
LINC01238-205ENST00000567549 TCTN1Q2MV58 587 aa21.23■□□□□ 0.99
LINC01238-205ENST00000567549 CEP55Q53EZ4 464 aa21.23■□□□□ 0.99
LINC01238-205ENST00000567549 WWC2Q6AWC2 1192 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms