RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 CAPZA3Q96KX2 299 aa18.52■□□□□ 0.56
CMTM3-213ENST00000566756 DEF6Q9H4E7 631 aa18.52■□□□□ 0.56
CMTM3-213ENST00000566756 TSKSQ9UJT2 592 aa18.52■□□□□ 0.56
CMTM3-213ENST00000566756 HYOU1Q9Y4L1 999 aa18.52■□□□□ 0.56
CMTM3-213ENST00000566756 DUSP10Q9Y6W6 482 aa18.52■□□□□ 0.56
CMTM3-213ENST00000566756 ZC3H4Q9UPT8 1303 aaKnown RBP18.52■□□□□ 0.56
CMTM3-213ENST00000566756 CUL5Q93034 780 aa18.51■□□□□ 0.55
CMTM3-213ENST00000566756 COA7Q96BR5 231 aa18.51■□□□□ 0.55
CMTM3-213ENST00000566756 DNAJC19Q96DA6 116 aa18.51■□□□□ 0.55
CMTM3-213ENST00000566756 MTMR8Q96EF0 704 aa18.51■□□□□ 0.55
CMTM3-213ENST00000566756 MMRN2Q9H8L6 949 aa18.51■□□□□ 0.55
CMTM3-213ENST00000566756 RNF14Q9UBS8 474 aa18.51■□□□□ 0.55
CMTM3-213ENST00000566756 GOLGB1Q14789 3259 aaKnown RBP18.51■□□□□ 0.55
CMTM3-213ENST00000566756 LRRC53A6NM62 1247 aa18.51■□□□□ 0.55
CMTM3-213ENST00000566756 AKR1B10O60218 316 aa18.51■□□□□ 0.55
CMTM3-213ENST00000566756 SYF2O95926 243 aaKnown RBP18.51■□□□□ 0.55
CMTM3-213ENST00000566756 EEF2P13639 858 aaKnown RBP18.51■□□□□ 0.55
CMTM3-213ENST00000566756 RBM26Q5T8P6 1007 aaKnown RBP18.51■□□□□ 0.55
CMTM3-213ENST00000566756 DYMQ7RTS9 669 aa18.51■□□□□ 0.55
CMTM3-213ENST00000566756 NLGN2Q8NFZ4 835 aa18.51■□□□□ 0.55
CMTM3-213ENST00000566756 JMJD4Q9H9V9 463 aa18.51■□□□□ 0.55
CMTM3-213ENST00000566756 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.51■□□□□ 0.55
CMTM3-213ENST00000566756 FAM207AQ9NSI2 230 aaPredicted RBP18.51■□□□□ 0.55
CMTM3-213ENST00000566756 BMP2KQ9NSY1 1161 aaPredicted RBP18.51■□□□□ 0.55
CMTM3-213ENST00000566756 CEP72Q9P209 647 aa18.51■□□□□ 0.55
CMTM3-213ENST00000566756 FAM184BQ9ULE4 1060 aa18.51■□□□□ 0.55
CMTM3-213ENST00000566756 COL4A3BPQ9Y5P4 624 aa18.51■□□□□ 0.55
CMTM3-213ENST00000566756 FRMPD2Q68DX3 1309 aaPredicted RBP18.51■□□□□ 0.55
CMTM3-213ENST00000566756 POTEMA6NI47 508 aa18.5■□□□□ 0.55
CMTM3-213ENST00000566756 EPHB6O15197 1021 aa18.5■□□□□ 0.55
CMTM3-213ENST00000566756 NKRFO15226 690 aaKnown RBP eCLIP18.5■□□□□ 0.552e-6■■■□□ 16.7
CMTM3-213ENST00000566756 PRPF6O94906 941 aaKnown RBP18.5■□□□□ 0.55
CMTM3-213ENST00000566756 PLEKP08567 350 aaPredicted RBP18.5■□□□□ 0.55
CMTM3-213ENST00000566756 CAPN2P17655 700 aa18.5■□□□□ 0.55
CMTM3-213ENST00000566756 KRT26Q7Z3Y9 468 aa18.5■□□□□ 0.55
CMTM3-213ENST00000566756 SIAH1Q8IUQ4 282 aa18.5■□□□□ 0.55
CMTM3-213ENST00000566756 GOLGA6L1Q8N7Z2 621 aa18.5■□□□□ 0.55
CMTM3-213ENST00000566756 AENQ8WTP8 325 aaKnown RBP18.5■□□□□ 0.55
CMTM3-213ENST00000566756 DCAF4Q8WV16 495 aa18.5■□□□□ 0.55
CMTM3-213ENST00000566756 SPON1Q9HCB6 807 aa18.5■□□□□ 0.55
CMTM3-213ENST00000566756 LUC7LQ9NQ29 371 aaKnown RBP18.5■□□□□ 0.55
CMTM3-213ENST00000566756 DDX25Q9UHL0 483 aaKnown RBP18.5■□□□□ 0.55
CMTM3-213ENST00000566756 CAPN6Q9Y6Q1 641 aa18.5■□□□□ 0.55
CMTM3-213ENST00000566756 ATAD5Q96QE3 1844 aa18.5■□□□□ 0.55
CMTM3-213ENST00000566756 TNFRSF8P28908 595 aa18.5■□□□□ 0.55
CMTM3-213ENST00000566756 MAGEA1P43355 309 aa18.5■□□□□ 0.55
CMTM3-213ENST00000566756 MAP3K10Q02779 954 aa18.5■□□□□ 0.55
CMTM3-213ENST00000566756 ICA1Q05084 483 aa18.5■□□□□ 0.55
CMTM3-213ENST00000566756 COASYQ13057 564 aa18.5■□□□□ 0.55
CMTM3-213ENST00000566756 RRAGAQ7L523 313 aa18.5■□□□□ 0.55
CMTM3-213ENST00000566756 ZC3H3Q8IXZ2 948 aaKnown RBP18.5■□□□□ 0.55
CMTM3-213ENST00000566756 HAS1Q92839 578 aa18.5■□□□□ 0.55
CMTM3-213ENST00000566756 OSBPL9Q96SU4 736 aa18.5■□□□□ 0.55
CMTM3-213ENST00000566756 PGAP2Q9UHJ9 254 aa18.5■□□□□ 0.55
CMTM3-213ENST00000566756 ZNF185O15231 689 aa18.49■□□□□ 0.55
CMTM3-213ENST00000566756 RNF40O75150 1001 aa18.49■□□□□ 0.55
CMTM3-213ENST00000566756 CLSTN1O94985 981 aa18.49■□□□□ 0.55
CMTM3-213ENST00000566756 TNNT3P45378 269 aaPredicted RBP18.49■□□□□ 0.55
CMTM3-213ENST00000566756 TNNI2P48788 182 aa18.49■□□□□ 0.55
CMTM3-213ENST00000566756 PRELPP51888 382 aa18.49■□□□□ 0.55
CMTM3-213ENST00000566756 RASSF7Q02833 373 aa18.49■□□□□ 0.55
CMTM3-213ENST00000566756 RAD51AP2Q09MP3 1159 aa18.49■□□□□ 0.55
CMTM3-213ENST00000566756 FAM26FQ5R3K3 315 aa18.49■□□□□ 0.55
CMTM3-213ENST00000566756 CACNA2D4Q7Z3S7 1137 aa18.49■□□□□ 0.55
CMTM3-213ENST00000566756 KCNK18Q7Z418 384 aa18.49■□□□□ 0.55
CMTM3-213ENST00000566756 ADGRF4Q8IZF3 695 aa18.49■□□□□ 0.55
CMTM3-213ENST00000566756 GMCL1P1Q8NEA9 526 aa18.49■□□□□ 0.55
CMTM3-213ENST00000566756 NUDT12Q9BQG2 462 aa18.49■□□□□ 0.55
CMTM3-213ENST00000566756 CRACR2AQ9BSW2 395 aa18.49■□□□□ 0.55
CMTM3-213ENST00000566756 SELENOOQ9BVL4 669 aa18.49■□□□□ 0.55
CMTM3-213ENST00000566756 VEZTQ9HBM0 779 aa18.49■□□□□ 0.55
CMTM3-213ENST00000566756 ZBTB5O15062 677 aa18.48■□□□□ 0.55
CMTM3-213ENST00000566756 ATP2B2Q01814 1243 aa18.48■□□□□ 0.55
CMTM3-213ENST00000566756 KCNMA1Q12791 1236 aa18.48■□□□□ 0.55
CMTM3-213ENST00000566756 NBPF9Q3BBW0 867 aa18.48■□□□□ 0.55
CMTM3-213ENST00000566756 SLC9C1Q4G0N8 1177 aa18.48■□□□□ 0.55
CMTM3-213ENST00000566756 GLE1Q53GS7 698 aaKnown RBP18.48■□□□□ 0.55
CMTM3-213ENST00000566756 HGSNATQ68CP4 663 aa18.48■□□□□ 0.55
CMTM3-213ENST00000566756 PPP4R3CPQ6ZMV5 832 aa18.48■□□□□ 0.55
CMTM3-213ENST00000566756 CCDC65Q8IXS2 484 aa18.48■□□□□ 0.55
CMTM3-213ENST00000566756 SPATA4Q8NEY3 305 aa18.48■□□□□ 0.55
CMTM3-213ENST00000566756 PANK4Q9NVE7 773 aa18.48■□□□□ 0.55
CMTM3-213ENST00000566756 GDF11O95390 407 aa18.48■□□□□ 0.55
CMTM3-213ENST00000566756 SERPING1P05155 500 aa18.48■□□□□ 0.55
CMTM3-213ENST00000566756 MCTP2Q6DN12 878 aa18.48■□□□□ 0.55
CMTM3-213ENST00000566756 MOXD1Q6UVY6 613 aa18.48■□□□□ 0.55
CMTM3-213ENST00000566756 AFAP1L1Q8TED9 768 aa18.48■□□□□ 0.55
CMTM3-213ENST00000566756 NOX5Q96PH1 765 aa18.48■□□□□ 0.55
CMTM3-213ENST00000566756 FAM204AQ9H8W3 233 aa18.48■□□□□ 0.55
CMTM3-213ENST00000566756 PCDHA12Q9UN75 941 aa18.48■□□□□ 0.55
CMTM3-213ENST00000566756 MOCS3O95396 460 aa18.47■□□□□ 0.55
CMTM3-213ENST00000566756 GH2P01242 217 aa18.47■□□□□ 0.55
CMTM3-213ENST00000566756 USP11P51784 963 aa18.47■□□□□ 0.55
CMTM3-213ENST00000566756 SLC20A2Q08357 652 aa18.47■□□□□ 0.55
CMTM3-213ENST00000566756 C2orf54Q08AI8 447 aa18.47■□□□□ 0.55
CMTM3-213ENST00000566756 RRP1BQ14684 758 aaKnown RBP18.47■□□□□ 0.55
CMTM3-213ENST00000566756 SHROOM1Q2M3G4 852 aaPredicted RBP18.47■□□□□ 0.55
CMTM3-213ENST00000566756 MBOAT7Q96N66 472 aa18.47■□□□□ 0.55
CMTM3-213ENST00000566756 MLXIPQ9HAP2 919 aa18.47■□□□□ 0.55
CMTM3-213ENST00000566756 GPCPD1Q9NPB8 672 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms