RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 NECTIN1Q15223 517 aa13.71□□□□□ -0.21
UBR1-206ENST00000566493 PLEKHG4Q58EX7 1191 aa13.71□□□□□ -0.21
UBR1-206ENST00000566493 KRT40Q6A162 431 aa13.71□□□□□ -0.21
UBR1-206ENST00000566493 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.71□□□□□ -0.21
UBR1-206ENST00000566493 RAB11FIP4Q86YS3 637 aa13.71□□□□□ -0.21
UBR1-206ENST00000566493 CCDC82Q8N4S0 544 aa13.71□□□□□ -0.21
UBR1-206ENST00000566493 FANCBQ8NB91 859 aa13.71□□□□□ -0.21
UBR1-206ENST00000566493 DBF4BQ8NFT6 615 aa13.71□□□□□ -0.21
UBR1-206ENST00000566493 GPRASP2Q96D09 838 aa13.71□□□□□ -0.21
UBR1-206ENST00000566493 FAM212AQ96EL1 285 aa13.71□□□□□ -0.21
UBR1-206ENST00000566493 TGS1Q96RS0 853 aaKnown RBP13.71□□□□□ -0.21
UBR1-206ENST00000566493 EHMT1Q9H9B1 1298 aa13.71□□□□□ -0.21
UBR1-206ENST00000566493 SETD4Q9NVD3 440 aa13.71□□□□□ -0.21
UBR1-206ENST00000566493 LMCD1Q9NZU5 365 aa13.71□□□□□ -0.21
UBR1-206ENST00000566493 MTUS1Q9ULD2 1270 aa13.71□□□□□ -0.21
UBR1-206ENST00000566493 INSL6Q9Y581 213 aa13.71□□□□□ -0.21
UBR1-206ENST00000566493 SPTBN5Q9NRC6 3674 aaKnown RBP13.71□□□□□ -0.22
UBR1-206ENST00000566493 KAT6AQ92794 2004 aa13.71□□□□□ -0.22
UBR1-206ENST00000566493 CTSHP09668 335 aa13.7□□□□□ -0.22
UBR1-206ENST00000566493 TFF2Q03403 129 aa13.7□□□□□ -0.22
UBR1-206ENST00000566493 HEATR3Q7Z4Q2 680 aa13.7□□□□□ -0.22
UBR1-206ENST00000566493 MICU3Q86XE3 530 aa13.7□□□□□ -0.22
UBR1-206ENST00000566493 TRIM50Q86XT4 487 aa13.7□□□□□ -0.22
UBR1-206ENST00000566493 MYOCDQ8IZQ8 938 aa13.7□□□□□ -0.22
UBR1-206ENST00000566493 KIF12Q96FN5 646 aa13.7□□□□□ -0.22
UBR1-206ENST00000566493 LRRC2Q9BYS8 371 aa13.7□□□□□ -0.22
UBR1-206ENST00000566493 NRCAMQ92823 1304 aa13.69□□□□□ -0.22
UBR1-206ENST00000566493 TCF20Q9UGU0 1960 aaKnown RBP13.69□□□□□ -0.22
UBR1-206ENST00000566493 hCG_1642624A0A1W2PR95 340 aa13.69□□□□□ -0.22
UBR1-206ENST00000566493 LINC01553A4QN01 128 aa13.69□□□□□ -0.22
UBR1-206ENST00000566493 TCF7P36402 384 aaPredicted RBP13.69□□□□□ -0.22
UBR1-206ENST00000566493 ERVK-21P61565 698 aa13.69□□□□□ -0.22
UBR1-206ENST00000566493 MTMR1Q13613 665 aa13.69□□□□□ -0.22
UBR1-206ENST00000566493 UBE2SQ16763 222 aa13.69□□□□□ -0.22
UBR1-206ENST00000566493 TMTC3Q6ZXV5 915 aa13.69□□□□□ -0.22
UBR1-206ENST00000566493 SPRED2Q7Z698 418 aa13.69□□□□□ -0.22
UBR1-206ENST00000566493 SGMS1Q86VZ5 419 aa13.69□□□□□ -0.22
UBR1-206ENST00000566493 GDPD5Q8WTR4 605 aa13.69□□□□□ -0.22
UBR1-206ENST00000566493 LMBR1Q8WVP7 490 aa13.69□□□□□ -0.22
UBR1-206ENST00000566493 HLA-CQ95604 372 aa13.69□□□□□ -0.22
UBR1-206ENST00000566493 NEK1Q96PY6 1258 aa13.69□□□□□ -0.22
UBR1-206ENST00000566493 RBM28Q9NW13 759 aaKnown RBP13.69□□□□□ -0.22
UBR1-206ENST00000566493 PCDHA6Q9UN73 950 aa13.69□□□□□ -0.22
UBR1-206ENST00000566493 PCDHA8Q9Y5H6 950 aa13.69□□□□□ -0.22
UBR1-206ENST00000566493 PRRC2BQ5JSZ5 2229 aaKnown RBP13.69□□□□□ -0.22
UBR1-206ENST00000566493 MICAL3Q7RTP6 2002 aa13.69□□□□□ -0.22
UBR1-206ENST00000566493 TRANK1O15050 2925 aa13.69□□□□□ -0.22
UBR1-206ENST00000566493 COL4A4P53420 1690 aaPredicted RBP13.69□□□□□ -0.22
UBR1-206ENST00000566493 REV3LO60673 3130 aa13.68□□□□□ -0.22
UBR1-206ENST00000566493 MAFGO15525 162 aa13.68□□□□□ -0.22
UBR1-206ENST00000566493 LPXNO60711 386 aa13.68□□□□□ -0.22
UBR1-206ENST00000566493 ATP9AO75110 1047 aa13.68□□□□□ -0.22
UBR1-206ENST00000566493 BMP1P13497 986 aa13.68□□□□□ -0.22
UBR1-206ENST00000566493 KCNA2P16389 499 aa13.68□□□□□ -0.22
UBR1-206ENST00000566493 ITGB5P18084 799 aa13.68□□□□□ -0.22
UBR1-206ENST00000566493 BMP2KLQ5H9B9 411 aa13.68□□□□□ -0.22
UBR1-206ENST00000566493 RSPH3Q86UC2 560 aa13.68□□□□□ -0.22
UBR1-206ENST00000566493 SEPT1Q8WYJ6 367 aa13.68□□□□□ -0.22
UBR1-206ENST00000566493 APBB2Q92870 758 aa13.68□□□□□ -0.22
UBR1-206ENST00000566493 GLG1Q92896 1179 aa13.68□□□□□ -0.22
UBR1-206ENST00000566493 YME1L1Q96TA2 773 aa13.68□□□□□ -0.22
UBR1-206ENST00000566493 SUGCTQ9HAC7 445 aa13.68□□□□□ -0.22
UBR1-206ENST00000566493 ERAP1Q9NZ08 941 aa13.68□□□□□ -0.22
UBR1-206ENST00000566493 PKD2L1Q9P0L9 805 aa13.68□□□□□ -0.22
UBR1-206ENST00000566493 TELO2Q9Y4R8 837 aa13.68□□□□□ -0.22
UBR1-206ENST00000566493 SIP14410 1827 aa13.68□□□□□ -0.22
UBR1-206ENST00000566493 MAP3K13O43283 966 aa13.67□□□□□ -0.22
UBR1-206ENST00000566493 UPP2O95045 317 aa13.67□□□□□ -0.22
UBR1-206ENST00000566493 KCNQ1P51787 676 aa13.67□□□□□ -0.22
UBR1-206ENST00000566493 HTRA4P83105 476 aaPredicted RBP13.67□□□□□ -0.22
UBR1-206ENST00000566493 PPFIA1Q13136 1202 aa13.67□□□□□ -0.22
UBR1-206ENST00000566493 FAM26DQ5JW98 314 aa13.67□□□□□ -0.22
UBR1-206ENST00000566493 TAF2Q6P1X5 1199 aa13.67□□□□□ -0.22
UBR1-206ENST00000566493 CENPQQ7L2Z9 268 aaPredicted RBP13.67□□□□□ -0.22
UBR1-206ENST00000566493 IFNLR1Q8IU57 520 aaPredicted RBP13.67□□□□□ -0.22
UBR1-206ENST00000566493 FBXO22Q8NEZ5 403 aa13.67□□□□□ -0.22
UBR1-206ENST00000566493 TNPO1Q92973 898 aaKnown RBP13.67□□□□□ -0.22
UBR1-206ENST00000566493 SMARCAD1Q9H4L7 1026 aa13.67□□□□□ -0.22
UBR1-206ENST00000566493 JADE2Q9NQC1 790 aa13.67□□□□□ -0.22
UBR1-206ENST00000566493 UBIAD1Q9Y5Z9 338 aa13.67□□□□□ -0.22
UBR1-206ENST00000566493 GSTTP1A0A1W2PQM5 241 aa13.66□□□□□ -0.22
UBR1-206ENST00000566493 ZBTB43O43298 467 aa13.66□□□□□ -0.22
UBR1-206ENST00000566493 MARK3P27448 753 aa13.66□□□□□ -0.22
UBR1-206ENST00000566493 NAPAP54920 295 aa13.66□□□□□ -0.22
UBR1-206ENST00000566493 ADAM17P78536 824 aa13.66□□□□□ -0.22
UBR1-206ENST00000566493 COL9A3Q14050 684 aaPredicted RBP13.66□□□□□ -0.22
UBR1-206ENST00000566493 GRIK4Q16099 956 aa13.66□□□□□ -0.22
UBR1-206ENST00000566493 RTN1Q16799 776 aa13.66□□□□□ -0.22
UBR1-206ENST00000566493 APOA5Q6Q788 366 aa13.66□□□□□ -0.22
UBR1-206ENST00000566493 DHX32Q7L7V1 743 aaKnown RBP13.66□□□□□ -0.22
UBR1-206ENST00000566493 TEX2Q8IWB9 1127 aa13.66□□□□□ -0.22
UBR1-206ENST00000566493 TOP1MTQ969P6 601 aa13.66□□□□□ -0.22
UBR1-206ENST00000566493 SAMD11Q96NU1 681 aa13.66□□□□□ -0.22
UBR1-206ENST00000566493 SDF4Q9BRK5 362 aa13.66□□□□□ -0.22
UBR1-206ENST00000566493 C17orf80Q9BSJ5 609 aa13.66□□□□□ -0.22
UBR1-206ENST00000566493 IFIH1Q9BYX4 1025 aaKnown RBP13.66□□□□□ -0.22
UBR1-206ENST00000566493 FOSP01100 380 aaPredicted RBP13.65□□□□□ -0.22
UBR1-206ENST00000566493 FGD1P98174 961 aa13.65□□□□□ -0.22
UBR1-206ENST00000566493 KRT32Q14532 448 aa13.65□□□□□ -0.22
UBR1-206ENST00000566493 PTPROQ16827 1216 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms