RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 UBE2HP62256 183 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 ZRSR1Q15695 479 aaKnown RBP8.75□□□□□ -1.01
CDH1-208ENST00000565810 IL17AQ16552 155 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 TPRNQ4KMQ1 711 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 TLK2Q86UE8 772 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 CABP7Q86V35 215 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 IGSF22Q8N9C0 903 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 TRPV1Q8NER1 839 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 NEK9Q8TD19 979 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 SNX29Q8TEQ0 813 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 SH3TC2Q8TF17 1288 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 MRPS27Q92552 414 aaKnown RBP8.75□□□□□ -1.01
CDH1-208ENST00000565810 COPS5Q92905 334 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 EMID1Q96A84 441 aaPredicted RBP8.75□□□□□ -1.01
CDH1-208ENST00000565810 CALML4Q96GE6 196 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 PYM1Q9BRP8 204 aaKnown RBP8.75□□□□□ -1.01
CDH1-208ENST00000565810 AZI2Q9H6S1 392 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 DDX20Q9UHI6 824 aaKnown RBP8.75□□□□□ -1.01
CDH1-208ENST00000565810 VAV3Q9UKW4 847 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 GNEQ9Y223 722 aaKnown RBP8.75□□□□□ -1.01
CDH1-208ENST00000565810 POTEMA6NI47 508 aa8.74□□□□□ -1.01
CDH1-208ENST00000565810 CCND3P30281 292 aaPredicted RBP8.74□□□□□ -1.01
CDH1-208ENST00000565810 MCM4P33991 863 aa8.74□□□□□ -1.01
CDH1-208ENST00000565810 CCT6AP40227 531 aaKnown RBP8.74□□□□□ -1.01
CDH1-208ENST00000565810 GRIN1Q05586 938 aa8.74□□□□□ -1.01
CDH1-208ENST00000565810 ARHGAP1Q07960 439 aa8.74□□□□□ -1.01
CDH1-208ENST00000565810 DGKDQ16760 1214 aa8.74□□□□□ -1.01
CDH1-208ENST00000565810 SPECC1Q5M775 1068 aa8.74□□□□□ -1.01
CDH1-208ENST00000565810 AXDND1Q5T1B0 1012 aaPredicted RBP8.74□□□□□ -1.01
CDH1-208ENST00000565810 GJC2Q5T442 439 aaPredicted RBP8.74□□□□□ -1.01
CDH1-208ENST00000565810 FAM160B1Q5W0V3 765 aa8.74□□□□□ -1.01
CDH1-208ENST00000565810 B3GNT9Q6UX72 402 aa8.74□□□□□ -1.01
CDH1-208ENST00000565810 FSIP1Q8NA03 581 aa8.74□□□□□ -1.01
CDH1-208ENST00000565810 PPTC7Q8NI37 304 aa8.74□□□□□ -1.01
CDH1-208ENST00000565810 AFG1LQ8WV93 481 aa8.74□□□□□ -1.01
CDH1-208ENST00000565810 SYMPKQ92797 1274 aaKnown RBP8.74□□□□□ -1.01
CDH1-208ENST00000565810 CCDC34Q96HJ3 373 aa8.74□□□□□ -1.01
CDH1-208ENST00000565810 EIF2AK1Q9BQI3 630 aaKnown RBP8.74□□□□□ -1.01
CDH1-208ENST00000565810 CCSER1Q9C0I3 900 aa8.74□□□□□ -1.01
CDH1-208ENST00000565810 NT5C3AQ9H0P0 336 aa8.74□□□□□ -1.01
CDH1-208ENST00000565810 ZSWIM4Q9H7M6 989 aa8.74□□□□□ -1.01
CDH1-208ENST00000565810 ZNF236Q9UL36 1845 aa8.74□□□□□ -1.01
CDH1-208ENST00000565810 KDM3AQ9Y4C1 1321 aa8.74□□□□□ -1.01
CDH1-208ENST00000565810 EML1O00423 815 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 KPNA6O60684 536 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 PPFIA4O75335 1185 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 ATG7O95352 703 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 CCNE2O96020 404 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 C6orf222P0C671 652 aaPredicted RBP8.73□□□□□ -1.01
CDH1-208ENST00000565810 SUPT20HL2P0C7V6 817 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 MUTP22033 750 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 RPA1P27694 616 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 CDC25AP30304 524 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 QARSP47897 775 aaKnown RBP8.73□□□□□ -1.01
CDH1-208ENST00000565810 STAT5BP51692 787 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 GJA9P57773 515 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 PSMC5P62195 406 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 SPIRE1Q08AE8 756 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 FSCN1Q16658 493 aaKnown RBP8.73□□□□□ -1.01
CDH1-208ENST00000565810 HSDL1Q3SXM5 330 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 TMEM63BQ5T3F8 832 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 UTP14CQ5TAP6 766 aaKnown RBP8.73□□□□□ -1.01
CDH1-208ENST00000565810 RRAGBQ5VZM2 374 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 RESP18Q5W5W9 173 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 SWSAP1Q6NVH7 229 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 PDXDC2PQ6P474 469 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 SHC4Q6S5L8 630 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 ABHD15Q6UXT9 468 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 CCDC73Q6ZRK6 1079 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 RNF180Q86T96 592 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 TPH2Q8IWU9 490 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 KCTD17Q8N5Z5 321 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 ARRDC4Q8NCT1 418 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 GLG1Q92896 1179 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 ATP6V0A1Q93050 837 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 DYDC2Q96IM9 177 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 EPSTI1Q96J88 318 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 GPR20Q99678 358 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 POLR3CQ9BUI4 534 aaPredicted RBP8.73□□□□□ -1.01
CDH1-208ENST00000565810 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.73□□□□□ -1.01
CDH1-208ENST00000565810 RNF208Q9H0X6 261 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 SMARCAD1Q9H4L7 1026 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 BCAS3Q9H6U6 928 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 TUFT1Q9NNX1 390 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 XPNPEP3Q9NQH7 507 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 ZNF302Q9NR11 478 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 LMBRD1Q9NUN5 540 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 GABBR1Q9UBS5 961 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 DNM3Q9UQ16 869 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 PLXNB2O15031 1838 aa8.73□□□□□ -1.01
CDH1-208ENST00000565810 A0A1B0GVL5 298 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 GSTTP1A0A1W2PQM5 241 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 A6NJR5 290 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 PP2D1A8MPX8 630 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 POLR2DO15514 142 aaKnown RBP8.72□□□□□ -1.01
CDH1-208ENST00000565810 GADD45BO75293 160 aaPredicted RBP8.72□□□□□ -1.01
CDH1-208ENST00000565810 SLITRK3O94933 977 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 MBD3O95983 291 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 MYCP01106 439 aaPredicted RBP8.72□□□□□ -1.01
CDH1-208ENST00000565810 MYCNP04198 464 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms