RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 NONOQ15233 471 aaKnown RBP eCLIP21.25■□□□□ 0.99
CMTM3-210ENST00000565666 NPY5RQ15761 445 aa21.25■□□□□ 0.99
CMTM3-210ENST00000565666 GLG1Q92896 1179 aa21.25■□□□□ 0.99
CMTM3-210ENST00000565666 UIMC1Q96RL1 719 aa21.25■□□□□ 0.99
CMTM3-210ENST00000565666 WNT8AQ9H1J5 351 aa21.25■□□□□ 0.99
CMTM3-210ENST00000565666 TCEAL9Q9UHQ7 104 aa21.25■□□□□ 0.99
CMTM3-210ENST00000565666 TRIOBPQ9H2D6 2365 aa21.24■□□□□ 0.99
CMTM3-210ENST00000565666 CCDC194A0A1B0GVG4 234 aa21.24■□□□□ 0.99
CMTM3-210ENST00000565666 M0R2N6 131 aa21.24■□□□□ 0.99
CMTM3-210ENST00000565666 IPO5O00410 1097 aaKnown RBP21.24■□□□□ 0.99
CMTM3-210ENST00000565666 SMIM10L2AP0DMW4 78 aa21.24■□□□□ 0.99
CMTM3-210ENST00000565666 SMIM10L2BP0DMW5 78 aa21.24■□□□□ 0.99
CMTM3-210ENST00000565666 FOSBP53539 338 aa21.24■□□□□ 0.99
CMTM3-210ENST00000565666 ACTR2P61160 394 aa21.24■□□□□ 0.99
CMTM3-210ENST00000565666 ST3GAL1Q11201 340 aa21.24■□□□□ 0.99
CMTM3-210ENST00000565666 TRIM29Q14134 588 aa21.24■□□□□ 0.99
CMTM3-210ENST00000565666 SCLYQ96I15 445 aa21.24■□□□□ 0.99
CMTM3-210ENST00000565666 SMARCAD1Q9H4L7 1026 aa21.24■□□□□ 0.99
CMTM3-210ENST00000565666 AZI2Q9H6S1 392 aa21.24■□□□□ 0.99
CMTM3-210ENST00000565666 BRMS1Q9HCU9 246 aa21.24■□□□□ 0.99
CMTM3-210ENST00000565666 SH2B1Q9NRF2 756 aaPredicted RBP21.24■□□□□ 0.99
CMTM3-210ENST00000565666 TANC1Q9C0D5 1861 aa21.24■□□□□ 0.99
CMTM3-210ENST00000565666 ACRP10323 421 aa21.23■□□□□ 0.99
CMTM3-210ENST00000565666 MARK3P27448 753 aa21.23■□□□□ 0.99
CMTM3-210ENST00000565666 ZNF200P98182 395 aaPredicted RBP21.23■□□□□ 0.99
CMTM3-210ENST00000565666 LRIT3Q3SXY7 679 aa21.23■□□□□ 0.99
CMTM3-210ENST00000565666 CAGE1Q8TC20 777 aa21.23■□□□□ 0.99
CMTM3-210ENST00000565666 RNPC3Q96LT9 517 aaKnown RBP21.23■□□□□ 0.99
CMTM3-210ENST00000565666 IL23AQ9NPF7 189 aa21.23■□□□□ 0.99
CMTM3-210ENST00000565666 ERAP1Q9NZ08 941 aa21.23■□□□□ 0.99
CMTM3-210ENST00000565666 EMSYQ7Z589 1322 aa21.23■□□□□ 0.99
CMTM3-210ENST00000565666 PITPNM1O00562 1244 aa21.22■□□□□ 0.99
CMTM3-210ENST00000565666 GNAT1P11488 350 aa21.22■□□□□ 0.99
CMTM3-210ENST00000565666 KRT2P35908 639 aa21.22■□□□□ 0.99
CMTM3-210ENST00000565666 PTK7Q13308 1070 aa21.22■□□□□ 0.99
CMTM3-210ENST00000565666 INF2Q27J81 1249 aa21.22■□□□□ 0.99
CMTM3-210ENST00000565666 PSRC1Q6PGN9 363 aaPredicted RBP21.22■□□□□ 0.99
CMTM3-210ENST00000565666 ATP6V0A1Q93050 837 aa21.22■□□□□ 0.99
CMTM3-210ENST00000565666 TBC1D32Q96NH3 1257 aa21.22■□□□□ 0.99
CMTM3-210ENST00000565666 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.22■□□□□ 0.992e-6■■□□□ 14.2
CMTM3-210ENST00000565666 RNPEPQ9H4A4 650 aa21.22■□□□□ 0.99
CMTM3-210ENST00000565666 TBC1D22BQ9NU19 505 aa21.22■□□□□ 0.99
CMTM3-210ENST00000565666 SOX1O00570 391 aaPredicted RBP21.21■□□□□ 0.99
CMTM3-210ENST00000565666 RPUSD2Q8IZ73 545 aaKnown RBP21.21■□□□□ 0.99
CMTM3-210ENST00000565666 OXER1Q8TDS5 423 aa21.21■□□□□ 0.99
CMTM3-210ENST00000565666 CTAGE1Q96RT6 745 aa21.21■□□□□ 0.99
CMTM3-210ENST00000565666 LLPHQ9BRT6 129 aaKnown RBP21.21■□□□□ 0.99
CMTM3-210ENST00000565666 SETD4Q9NVD3 440 aa21.21■□□□□ 0.99
CMTM3-210ENST00000565666 TRIP12Q14669 1992 aaPredicted RBP21.21■□□□□ 0.99
CMTM3-210ENST00000565666 BACH1O14867 736 aa21.2■□□□□ 0.98
CMTM3-210ENST00000565666 DHX15O43143 795 aaKnown RBP21.2■□□□□ 0.98
CMTM3-210ENST00000565666 LGR5O75473 907 aa21.2■□□□□ 0.98
CMTM3-210ENST00000565666 TDP2O95551 362 aa21.2■□□□□ 0.98
CMTM3-210ENST00000565666 HIC1Q14526 733 aa21.2■□□□□ 0.98
CMTM3-210ENST00000565666 TMEM240Q5SV17 173 aa21.2■□□□□ 0.98
CMTM3-210ENST00000565666 PIK3AP1Q6ZUJ8 805 aa21.2■□□□□ 0.98
CMTM3-210ENST00000565666 ZNF365Q70YC5 407 aa21.2■□□□□ 0.98
CMTM3-210ENST00000565666 C16orf59Q7L2K0 433 aa21.2■□□□□ 0.98
CMTM3-210ENST00000565666 DEFB128Q7Z7B8 93 aa21.2■□□□□ 0.98
CMTM3-210ENST00000565666 IL27Q8NEV9 243 aa21.2■□□□□ 0.98
CMTM3-210ENST00000565666 AFAP1L1Q8TED9 768 aa21.2■□□□□ 0.98
CMTM3-210ENST00000565666 DHX38Q92620 1227 aaKnown RBP21.2■□□□□ 0.98
CMTM3-210ENST00000565666 LENG9Q96B70 501 aa21.2■□□□□ 0.98
CMTM3-210ENST00000565666 LRCH3Q96II8 777 aa21.2■□□□□ 0.98
CMTM3-210ENST00000565666 SCN5AQ14524 2016 aa21.19■□□□□ 0.98
CMTM3-210ENST00000565666 MSH4O15457 936 aa21.19■□□□□ 0.98
CMTM3-210ENST00000565666 EDIL3O43854 480 aa21.19■□□□□ 0.98
CMTM3-210ENST00000565666 CCNE2O96020 404 aa21.19■□□□□ 0.98
CMTM3-210ENST00000565666 FGBP02675 491 aa21.19■□□□□ 0.98
CMTM3-210ENST00000565666 IQCF3P0C7M6 154 aa21.19■□□□□ 0.98
CMTM3-210ENST00000565666 RFC2P35250 354 aa21.19■□□□□ 0.98
CMTM3-210ENST00000565666 STAT5BP51692 787 aa21.19■□□□□ 0.98
CMTM3-210ENST00000565666 LETM2Q2VYF4 491 aa21.19■□□□□ 0.98
CMTM3-210ENST00000565666 FAM160B1Q5W0V3 765 aa21.19■□□□□ 0.98
CMTM3-210ENST00000565666 KRT40Q6A162 431 aa21.19■□□□□ 0.98
CMTM3-210ENST00000565666 MIS18BP1Q6P0N0 1132 aa21.19■□□□□ 0.98
CMTM3-210ENST00000565666 NEK8Q86SG6 692 aa21.19■□□□□ 0.98
CMTM3-210ENST00000565666 PCYT2Q99447 389 aa21.19■□□□□ 0.98
CMTM3-210ENST00000565666 NRCAMQ92823 1304 aa21.19■□□□□ 0.98
CMTM3-210ENST00000565666 KAT6AQ92794 2004 aa21.18■□□□□ 0.98
CMTM3-210ENST00000565666 TREHO43280 583 aa21.18■□□□□ 0.98
CMTM3-210ENST00000565666 GAS7O60861 476 aa21.18■□□□□ 0.98
CMTM3-210ENST00000565666 ATG7O95352 703 aa21.18■□□□□ 0.98
CMTM3-210ENST00000565666 MMP1P03956 469 aa21.18■□□□□ 0.98
CMTM3-210ENST00000565666 CKBP12277 381 aa21.18■□□□□ 0.98
CMTM3-210ENST00000565666 SELPP16109 830 aa21.18■□□□□ 0.98
CMTM3-210ENST00000565666 HOXC8P31273 242 aa21.18■□□□□ 0.98
CMTM3-210ENST00000565666 HMGN5P82970 282 aaKnown RBP21.18■□□□□ 0.98
CMTM3-210ENST00000565666 KRT76Q01546 638 aa21.18■□□□□ 0.98
CMTM3-210ENST00000565666 PPFIA1Q13136 1202 aa21.18■□□□□ 0.98
CMTM3-210ENST00000565666 Q4G0T1 1027 aa21.18■□□□□ 0.98
CMTM3-210ENST00000565666 ZNF746Q6NUN9 644 aaPredicted RBP21.18■□□□□ 0.98
CMTM3-210ENST00000565666 MOXD1Q6UVY6 613 aa21.18■□□□□ 0.98
CMTM3-210ENST00000565666 LRRC8DQ7L1W4 858 aa21.18■□□□□ 0.98
CMTM3-210ENST00000565666 SERINC5Q86VE9 423 aa21.18■□□□□ 0.98
CMTM3-210ENST00000565666 FAM184AQ8NB25 1140 aa21.18■□□□□ 0.98
CMTM3-210ENST00000565666 LMBR1Q8WVP7 490 aa21.18■□□□□ 0.98
CMTM3-210ENST00000565666 TNPO1Q92973 898 aaKnown RBP21.18■□□□□ 0.98
CMTM3-210ENST00000565666 BACH2Q9BYV9 841 aa21.18■□□□□ 0.98
CMTM3-210ENST00000565666 MTIF3Q9H2K0 278 aaKnown RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms