RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 BLOC1S2Q6QNY1 142 aa17.93■□□□□ 0.46
CDH3-204ENST00000565453 TMCO2Q7Z6W1 182 aaPredicted RBP17.93■□□□□ 0.46
CDH3-204ENST00000565453 CYP2W1Q8TAV3 490 aa17.93■□□□□ 0.46
CDH3-204ENST00000565453 LMBR1Q8WVP7 490 aa17.93■□□□□ 0.46
CDH3-204ENST00000565453 SEPT1Q8WYJ6 367 aa17.93■□□□□ 0.46
CDH3-204ENST00000565453 BRF1Q92994 677 aa17.93■□□□□ 0.46
CDH3-204ENST00000565453 MXRA8Q9BRK3 442 aa17.93■□□□□ 0.46
CDH3-204ENST00000565453 ANO3Q9BYT9 981 aa17.93■□□□□ 0.46
CDH3-204ENST00000565453 OSBPL7Q9BZF2 842 aa17.93■□□□□ 0.46
CDH3-204ENST00000565453 PKD2L1Q9P0L9 805 aa17.93■□□□□ 0.46
CDH3-204ENST00000565453 EMSYQ7Z589 1322 aa17.93■□□□□ 0.46
CDH3-204ENST00000565453 EPOPA6NHQ4 379 aa17.92■□□□□ 0.46
CDH3-204ENST00000565453 KIF28PB7ZC32 967 aa17.92■□□□□ 0.46
CDH3-204ENST00000565453 EFCAB14O75071 495 aa17.92■□□□□ 0.46
CDH3-204ENST00000565453 GNAT1P11488 350 aa17.92■□□□□ 0.46
CDH3-204ENST00000565453 IGFBP4P22692 258 aa17.92■□□□□ 0.46
CDH3-204ENST00000565453 PFKFB3Q16875 520 aaPredicted RBP17.92■□□□□ 0.46
CDH3-204ENST00000565453 DBF4BQ8NFT6 615 aa17.92■□□□□ 0.46
CDH3-204ENST00000565453 PRDM6Q9NQX0 595 aa17.92■□□□□ 0.46
CDH3-204ENST00000565453 KCNH7Q9NS40 1196 aa17.92■□□□□ 0.46
CDH3-204ENST00000565453 TMEM260Q9NX78 707 aa17.92■□□□□ 0.46
CDH3-204ENST00000565453 NRCAMQ92823 1304 aa17.92■□□□□ 0.46
CDH3-204ENST00000565453 EYSQ5T1H1 3165 aa17.91■□□□□ 0.46
CDH3-204ENST00000565453 CCDC196A0A1B0GTZ2 297 aa17.91■□□□□ 0.46
CDH3-204ENST00000565453 TLL1O43897 1013 aa17.91■□□□□ 0.46
CDH3-204ENST00000565453 REC8O95072 547 aa17.91■□□□□ 0.46
CDH3-204ENST00000565453 SREBF1P36956 1147 aa17.91■□□□□ 0.46
CDH3-204ENST00000565453 ARHGAP4P98171 946 aa17.91■□□□□ 0.46
CDH3-204ENST00000565453 FGD1P98174 961 aa17.91■□□□□ 0.46
CDH3-204ENST00000565453 AP3B2Q13367 1082 aa17.91■□□□□ 0.46
CDH3-204ENST00000565453 IKBKEQ14164 716 aa17.91■□□□□ 0.46
CDH3-204ENST00000565453 PKN1Q16512 942 aa17.91■□□□□ 0.46
CDH3-204ENST00000565453 PLEKHG4Q58EX7 1191 aa17.91■□□□□ 0.46
CDH3-204ENST00000565453 FAM26DQ5JW98 314 aa17.91■□□□□ 0.46
CDH3-204ENST00000565453 SPRED2Q7Z698 418 aa17.91■□□□□ 0.46
CDH3-204ENST00000565453 PCYT2Q99447 389 aa17.91■□□□□ 0.46
CDH3-204ENST00000565453 GLT8D2Q9H1C3 349 aa17.91■□□□□ 0.46
CDH3-204ENST00000565453 NAP1L2Q9ULW6 460 aaPredicted RBP17.91■□□□□ 0.46
CDH3-204ENST00000565453 NFASCO94856 1347 aa17.91■□□□□ 0.46
CDH3-204ENST00000565453 UNC80Q8N2C7 3258 aa17.9■□□□□ 0.46
CDH3-204ENST00000565453 ESYT2A0FGR8 921 aa17.9■□□□□ 0.46
CDH3-204ENST00000565453 LCHNA4D1U4 455 aa17.9■□□□□ 0.46
CDH3-204ENST00000565453 RFXAPO00287 272 aa17.9■□□□□ 0.46
CDH3-204ENST00000565453 ADAMTS3O15072 1205 aa17.9■□□□□ 0.46
CDH3-204ENST00000565453 EPB41L2O43491 1005 aaKnown RBP17.9■□□□□ 0.46
CDH3-204ENST00000565453 GJB5O95377 273 aa17.9■□□□□ 0.46
CDH3-204ENST00000565453 ARP10275 920 aa17.9■□□□□ 0.46
CDH3-204ENST00000565453 SCG2P13521 617 aa17.9■□□□□ 0.46
CDH3-204ENST00000565453 POU3F3P20264 500 aaPredicted RBP17.9■□□□□ 0.46
CDH3-204ENST00000565453 ITGB3BPQ13352 177 aaPredicted RBP17.9■□□□□ 0.46
CDH3-204ENST00000565453 NTRK3Q16288 839 aa17.9■□□□□ 0.46
CDH3-204ENST00000565453 CEP55Q53EZ4 464 aa17.9■□□□□ 0.46
CDH3-204ENST00000565453 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.9■□□□□ 0.46
CDH3-204ENST00000565453 RPAINQ86UA6 219 aa17.9■□□□□ 0.46
CDH3-204ENST00000565453 CRYGNQ8WXF5 182 aa17.9■□□□□ 0.46
CDH3-204ENST00000565453 PPM1EQ8WY54 764 aa17.9■□□□□ 0.46
CDH3-204ENST00000565453 CERS4Q9HA82 394 aa17.9■□□□□ 0.46
CDH3-204ENST00000565453 JPH1Q9HDC5 661 aaPredicted RBP17.9■□□□□ 0.46
CDH3-204ENST00000565453 ERAP1Q9NZ08 941 aa17.9■□□□□ 0.46
CDH3-204ENST00000565453 SLC9A2Q9UBY0 812 aa17.9■□□□□ 0.46
CDH3-204ENST00000565453 MYO9BQ13459 2157 aa17.9■□□□□ 0.46
CDH3-204ENST00000565453 MEIS1O00470 390 aa17.89■□□□□ 0.45
CDH3-204ENST00000565453 PRPF3O43395 683 aaKnown RBP17.89■□□□□ 0.45
CDH3-204ENST00000565453 CTSHP09668 335 aa17.89■□□□□ 0.45
CDH3-204ENST00000565453 PSMA5P28066 241 aa17.89■□□□□ 0.45
CDH3-204ENST00000565453 EVCP57679 992 aa17.89■□□□□ 0.45
CDH3-204ENST00000565453 RUFY4Q6ZNE9 571 aa17.89■□□□□ 0.45
CDH3-204ENST00000565453 ZMYND12Q9H0C1 365 aa17.89■□□□□ 0.45
CDH3-204ENST00000565453 SMARCAD1Q9H4L7 1026 aa17.89■□□□□ 0.45
CDH3-204ENST00000565453 AGO4Q9HCK5 861 aaKnown RBP17.89■□□□□ 0.45
CDH3-204ENST00000565453 MICAL3Q7RTP6 2002 aa17.89■□□□□ 0.45
CDH3-204ENST00000565453 MBLAC1A4D2B0 266 aaPredicted RBP17.88■□□□□ 0.45
CDH3-204ENST00000565453 MARK3P27448 753 aa17.88■□□□□ 0.45
CDH3-204ENST00000565453 MGAT3Q09327 533 aa17.88■□□□□ 0.45
CDH3-204ENST00000565453 PPFIA1Q13136 1202 aa17.88■□□□□ 0.45
CDH3-204ENST00000565453 CCDC85BQ15834 202 aaPredicted RBP17.88■□□□□ 0.45
CDH3-204ENST00000565453 GRIK4Q16099 956 aa17.88■□□□□ 0.45
CDH3-204ENST00000565453 MARCH8Q5T0T0 291 aa17.88■□□□□ 0.45
CDH3-204ENST00000565453 JAKMIP3Q5VZ66 844 aa17.88■□□□□ 0.45
CDH3-204ENST00000565453 NIPA1Q7RTP0 329 aa17.88■□□□□ 0.45
CDH3-204ENST00000565453 ARNTL2Q8WYA1 636 aa17.88■□□□□ 0.45
CDH3-204ENST00000565453 RAD9AQ99638 391 aa17.88■□□□□ 0.45
CDH3-204ENST00000565453 MTCH2Q9Y6C9 303 aa17.88■□□□□ 0.45
CDH3-204ENST00000565453 CHD7Q9P2D1 2997 aa17.88■□□□□ 0.45
CDH3-204ENST00000565453 SIP14410 1827 aa17.87■□□□□ 0.45
CDH3-204ENST00000565453 FAM86B1E9PN63 330 aa17.87■□□□□ 0.45
CDH3-204ENST00000565453 ATG7O95352 703 aa17.87■□□□□ 0.45
CDH3-204ENST00000565453 CHRNA1P02708 482 aa17.87■□□□□ 0.45
CDH3-204ENST00000565453 CYP3A4P08684 503 aa17.87■□□□□ 0.45
CDH3-204ENST00000565453 FAM86B2P0C5J1 330 aa17.87■□□□□ 0.45
CDH3-204ENST00000565453 PDIA3P30101 505 aaKnown RBP17.87■□□□□ 0.45
CDH3-204ENST00000565453 ACTR2P61160 394 aa17.87■□□□□ 0.45
CDH3-204ENST00000565453 TAF2Q6P1X5 1199 aa17.87■□□□□ 0.45
CDH3-204ENST00000565453 SEPT8Q92599 483 aa17.87■□□□□ 0.45
CDH3-204ENST00000565453 GLG1Q92896 1179 aa17.87■□□□□ 0.45
CDH3-204ENST00000565453 PHKBQ93100 1093 aa17.87■□□□□ 0.45
CDH3-204ENST00000565453 SDF4Q9BRK5 362 aa17.87■□□□□ 0.45
CDH3-204ENST00000565453 ZBED2Q9BTP6 218 aa17.87■□□□□ 0.45
CDH3-204ENST00000565453 ZSWIM6Q9HCJ5 1215 aa17.87■□□□□ 0.45
CDH3-204ENST00000565453 COL4A4P53420 1690 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms