RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 RFPL3O75679 317 aa6.19□□□□□ -1.42
PALB2-203ENST00000565038 FAHP16930 419 aa6.19□□□□□ -1.42
PALB2-203ENST00000565038 IGFALSP35858 605 aa6.19□□□□□ -1.42
PALB2-203ENST00000565038 LACTBP83111 547 aaPredicted RBP6.19□□□□□ -1.42
PALB2-203ENST00000565038 DLX2Q07687 328 aaPredicted RBP6.19□□□□□ -1.42
PALB2-203ENST00000565038 PHF19Q5T6S3 580 aa6.19□□□□□ -1.42
PALB2-203ENST00000565038 BTBD8Q5XKL5 378 aa6.19□□□□□ -1.42
PALB2-203ENST00000565038 LIPIQ6XZB0 460 aa6.19□□□□□ -1.42
PALB2-203ENST00000565038 OVCH1Q7RTY7 1134 aa6.19□□□□□ -1.42
PALB2-203ENST00000565038 SAPCD2Q86UD0 394 aa6.19□□□□□ -1.42
PALB2-203ENST00000565038 DHX37Q8IY37 1157 aaKnown RBP6.19□□□□□ -1.42
PALB2-203ENST00000565038 NLGN4XQ8N0W4 816 aa6.19□□□□□ -1.42
PALB2-203ENST00000565038 SYNPOQ8N3V7 929 aa6.19□□□□□ -1.42
PALB2-203ENST00000565038 KYQ8NBH2 561 aa6.19□□□□□ -1.42
PALB2-203ENST00000565038 TP53I13Q8NBR0 393 aaPredicted RBP6.19□□□□□ -1.42
PALB2-203ENST00000565038 RIC8BQ9NVN3 520 aa6.19□□□□□ -1.42
PALB2-203ENST00000565038 SAMD15Q9P1V8 674 aa6.19□□□□□ -1.42
PALB2-203ENST00000565038 ATP23Q9Y6H3 246 aa6.19□□□□□ -1.42
PALB2-203ENST00000565038 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.18□□□□□ -1.42
PALB2-203ENST00000565038 ASLP04424 464 aa6.18□□□□□ -1.42
PALB2-203ENST00000565038 PTPN1P18031 435 aaKnown RBP6.18□□□□□ -1.42
PALB2-203ENST00000565038 ADAM9Q13443 819 aa6.18□□□□□ -1.42
PALB2-203ENST00000565038 FZD5Q13467 585 aa6.18□□□□□ -1.42
PALB2-203ENST00000565038 TMEM177Q53S58 311 aa6.18□□□□□ -1.42
PALB2-203ENST00000565038 LCE3BQ5TA77 95 aa6.18□□□□□ -1.42
PALB2-203ENST00000565038 CPZQ66K79 652 aa6.18□□□□□ -1.42
PALB2-203ENST00000565038 FSTL4Q6MZW2 842 aa6.18□□□□□ -1.42
PALB2-203ENST00000565038 ZCCHC8Q6NZY4 707 aaKnown RBP6.18□□□□□ -1.42
PALB2-203ENST00000565038 DDX53Q86TM3 631 aaKnown RBP6.18□□□□□ -1.42
PALB2-203ENST00000565038 PROSER1Q86XN7 944 aa6.18□□□□□ -1.42
PALB2-203ENST00000565038 LINC01356Q8N9X3 169 aa6.18□□□□□ -1.42
PALB2-203ENST00000565038 PCDH18Q9HCL0 1135 aa6.18□□□□□ -1.42
PALB2-203ENST00000565038 M0R2C6 588 aa6.17□□□□□ -1.42
PALB2-203ENST00000565038 SCDO00767 359 aa6.17□□□□□ -1.42
PALB2-203ENST00000565038 SMARCA5O60264 1052 aaPredicted RBP6.17□□□□□ -1.42
PALB2-203ENST00000565038 GLRX3O76003 335 aaKnown RBP6.17□□□□□ -1.42
PALB2-203ENST00000565038 BMP7P18075 431 aa6.17□□□□□ -1.42
PALB2-203ENST00000565038 THBS2P35442 1172 aa6.17□□□□□ -1.42
PALB2-203ENST00000565038 SEC23AQ15436 765 aa6.17□□□□□ -1.42
PALB2-203ENST00000565038 FIGNQ5HY92 759 aa6.17□□□□□ -1.42
PALB2-203ENST00000565038 PIK3R6Q5UE93 754 aa6.17□□□□□ -1.42
PALB2-203ENST00000565038 C2orf69Q8N8R5 385 aa6.17□□□□□ -1.42
PALB2-203ENST00000565038 PDGFDQ9GZP0 370 aaPredicted RBP6.17□□□□□ -1.42
PALB2-203ENST00000565038 TMA7Q9Y2S6 64 aaKnown RBP6.17□□□□□ -1.42
PALB2-203ENST00000565038 B4E1Z4 1266 aa6.16□□□□□ -1.42
PALB2-203ENST00000565038 ENPP3O14638 875 aa6.16□□□□□ -1.42
PALB2-203ENST00000565038 TRIM13O60858 407 aa6.16□□□□□ -1.42
PALB2-203ENST00000565038 KRT37O76014 449 aa6.16□□□□□ -1.42
PALB2-203ENST00000565038 JMJD7P0C870 316 aa6.16□□□□□ -1.42
PALB2-203ENST00000565038 RTP5Q14D33 572 aa6.16□□□□□ -1.42
PALB2-203ENST00000565038 CFAP100Q494V2 611 aa6.16□□□□□ -1.42
PALB2-203ENST00000565038 TM4SF20Q53R12 229 aa6.16□□□□□ -1.42
PALB2-203ENST00000565038 CD276Q5ZPR3 534 aa6.16□□□□□ -1.42
PALB2-203ENST00000565038 CDCA2Q69YH5 1023 aaPredicted RBP6.16□□□□□ -1.42
PALB2-203ENST00000565038 VASNQ6EMK4 673 aa6.16□□□□□ -1.42
PALB2-203ENST00000565038 CNNM4Q6P4Q7 775 aa6.16□□□□□ -1.42
PALB2-203ENST00000565038 HHIPL2Q6UWX4 724 aa6.16□□□□□ -1.42
PALB2-203ENST00000565038 SIAH1Q8IUQ4 282 aa6.16□□□□□ -1.42
PALB2-203ENST00000565038 TTLL6Q8N841 843 aa6.16□□□□□ -1.42
PALB2-203ENST00000565038 NINJ1Q92982 152 aa6.16□□□□□ -1.42
PALB2-203ENST00000565038 FEZ1Q99689 392 aa6.16□□□□□ -1.42
PALB2-203ENST00000565038 HSPBP1Q9NZL4 362 aa6.16□□□□□ -1.42
PALB2-203ENST00000565038 MAGEC2Q9UBF1 373 aaPredicted RBP6.16□□□□□ -1.42
PALB2-203ENST00000565038 CROTQ9UKG9 612 aa6.16□□□□□ -1.42
PALB2-203ENST00000565038 SLC12A8A0AV02 714 aa6.15□□□□□ -1.42
PALB2-203ENST00000565038 SH3D21A4FU49 640 aa6.15□□□□□ -1.42
PALB2-203ENST00000565038 PRAMEF25A6NGN4 478 aa6.15□□□□□ -1.42
PALB2-203ENST00000565038 CLASP2O75122 1294 aaKnown RBP6.15□□□□□ -1.42
PALB2-203ENST00000565038 NPTXRO95502 500 aa6.15□□□□□ -1.42
PALB2-203ENST00000565038 C4BPAP04003 597 aaKnown RBP6.15□□□□□ -1.42
PALB2-203ENST00000565038 GLRBP48167 497 aa6.15□□□□□ -1.42
PALB2-203ENST00000565038 CAP1Q01518 475 aa6.15□□□□□ -1.42
PALB2-203ENST00000565038 PFKPQ01813 784 aa6.15□□□□□ -1.42
PALB2-203ENST00000565038 DALRD3Q5D0E6 543 aaKnown RBP6.15□□□□□ -1.42
PALB2-203ENST00000565038 SDE2Q6IQ49 451 aa6.15□□□□□ -1.42
PALB2-203ENST00000565038 SPOCD1Q6ZMY3 1216 aa6.15□□□□□ -1.42
PALB2-203ENST00000565038 TTLL7Q6ZT98 887 aa6.15□□□□□ -1.42
PALB2-203ENST00000565038 UBE2R2Q712K3 238 aaPredicted RBP6.15□□□□□ -1.42
PALB2-203ENST00000565038 KIAA0907Q7Z7F0 614 aaPredicted RBP6.15□□□□□ -1.42
PALB2-203ENST00000565038 NOSTRINQ8IVI9 506 aa6.15□□□□□ -1.42
PALB2-203ENST00000565038 NIM1KQ8IY84 436 aa6.15□□□□□ -1.42
PALB2-203ENST00000565038 CARFQ8N187 725 aa6.15□□□□□ -1.42
PALB2-203ENST00000565038 SYT8Q8NBV8 401 aa6.15□□□□□ -1.42
PALB2-203ENST00000565038 CLIC6Q96NY7 704 aa6.15□□□□□ -1.42
PALB2-203ENST00000565038 SPATA25Q9BR10 227 aa6.15□□□□□ -1.42
PALB2-203ENST00000565038 SLC39A2Q9NP94 309 aa6.15□□□□□ -1.42
PALB2-203ENST00000565038 NTMQ9P121 344 aa6.15□□□□□ -1.42
PALB2-203ENST00000565038 TRAF5O00463 557 aa6.14□□□□□ -1.43
PALB2-203ENST00000565038 DDX3XO00571 662 aaKnown RBP eCLIP6.14□□□□□ -1.43
PALB2-203ENST00000565038 KPNA6O60684 536 aa6.14□□□□□ -1.43
PALB2-203ENST00000565038 ENO2P09104 434 aaPredicted RBP6.14□□□□□ -1.43
PALB2-203ENST00000565038 FLT3P36888 993 aa6.14□□□□□ -1.43
PALB2-203ENST00000565038 SARSP49591 514 aaKnown RBP6.14□□□□□ -1.43
PALB2-203ENST00000565038 MECP2P51608 486 aaKnown RBP6.14□□□□□ -1.43
PALB2-203ENST00000565038 NEK4P51957 841 aa6.14□□□□□ -1.43
PALB2-203ENST00000565038 SLURP1P55000 103 aa6.14□□□□□ -1.43
PALB2-203ENST00000565038 DBPQ10586 325 aaPredicted RBP6.14□□□□□ -1.43
PALB2-203ENST00000565038 SKIDA1Q1XH10 827 aa6.14□□□□□ -1.43
PALB2-203ENST00000565038 KRTAP19-4Q3LI73 84 aa6.14□□□□□ -1.43
PALB2-203ENST00000565038 PKN3Q6P5Z2 889 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms