RNA–Protein interactions for RNA: ENST00000564421.1

CPNE7-207, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-207ENST00000564421 CDK7P50613 346 aa19.4■□□□□ 0.7
CPNE7-207ENST00000564421 KRT85P78386 507 aa19.4■□□□□ 0.7
CPNE7-207ENST00000564421 CEBPZQ03701 1054 aaKnown RBP19.4■□□□□ 0.7
CPNE7-207ENST00000564421 ITGA7Q13683 1181 aa19.4■□□□□ 0.7
CPNE7-207ENST00000564421 ZNF174Q15697 407 aa19.4■□□□□ 0.7
CPNE7-207ENST00000564421 TRIM60Q495X7 471 aa19.4■□□□□ 0.7
CPNE7-207ENST00000564421 Q4G0T1 1027 aa19.4■□□□□ 0.7
CPNE7-207ENST00000564421 ANKRD33Q7Z3H0 272 aa19.4■□□□□ 0.7
CPNE7-207ENST00000564421 LENG9Q96B70 501 aa19.4■□□□□ 0.7
CPNE7-207ENST00000564421 USP28Q96RU2 1077 aa19.4■□□□□ 0.7
CPNE7-207ENST00000564421 GPR20Q99678 358 aa19.4■□□□□ 0.7
CPNE7-207ENST00000564421 NAP1L4Q99733 375 aaKnown RBP19.4■□□□□ 0.7
CPNE7-207ENST00000564421 SDF4Q9BRK5 362 aa19.4■□□□□ 0.7
CPNE7-207ENST00000564421 CFAP45Q9UL16 551 aa19.4■□□□□ 0.7
CPNE7-207ENST00000564421 PCDHB6Q9Y5E3 794 aa19.4■□□□□ 0.7
CPNE7-207ENST00000564421 LTBP2Q14767 1821 aa19.39■□□□□ 0.7
CPNE7-207ENST00000564421 MCM7P33993 719 aa19.39■□□□□ 0.69
CPNE7-207ENST00000564421 PRR16Q569H4 304 aa19.39■□□□□ 0.69
CPNE7-207ENST00000564421 C7orf61Q8IZ16 206 aa19.39■□□□□ 0.69
CPNE7-207ENST00000564421 MBOAT7Q96N66 472 aa19.39■□□□□ 0.69
CPNE7-207ENST00000564421 KATNAL1Q9BW62 490 aa19.39■□□□□ 0.69
CPNE7-207ENST00000564421 FTOQ9C0B1 505 aaKnown RBP eCLIP19.39■□□□□ 0.69
CPNE7-207ENST00000564421 JPH1Q9HDC5 661 aaPredicted RBP19.39■□□□□ 0.69
CPNE7-207ENST00000564421 PKD2L1Q9P0L9 805 aa19.39■□□□□ 0.69
CPNE7-207ENST00000564421 SLC9A2Q9UBY0 812 aa19.39■□□□□ 0.69
CPNE7-207ENST00000564421 ATP11BQ9Y2G3 1177 aa19.39■□□□□ 0.69
CPNE7-207ENST00000564421 CLIC4Q9Y696 253 aa19.39■□□□□ 0.69
CPNE7-207ENST00000564421 GRIN2DO15399 1336 aa19.39■□□□□ 0.69
CPNE7-207ENST00000564421 IPO5O00410 1097 aaKnown RBP19.38■□□□□ 0.69
CPNE7-207ENST00000564421 TDP2O95551 362 aa19.38■□□□□ 0.69
CPNE7-207ENST00000564421 F2P00734 622 aa19.38■□□□□ 0.69
CPNE7-207ENST00000564421 GCFC2P16383 781 aaKnown RBP19.38■□□□□ 0.69
CPNE7-207ENST00000564421 PSMC6P62333 389 aa19.38■□□□□ 0.69
CPNE7-207ENST00000564421 ITGB3BPQ13352 177 aaPredicted RBP19.38■□□□□ 0.69
CPNE7-207ENST00000564421 SF3A1Q15459 793 aaKnown RBP19.38■□□□□ 0.69
CPNE7-207ENST00000564421 PPP4R3AQ6IN85 833 aa19.38■□□□□ 0.69
CPNE7-207ENST00000564421 NFRKBQ6P4R8 1299 aa19.38■□□□□ 0.69
CPNE7-207ENST00000564421 SEPT1Q8WYJ6 367 aa19.38■□□□□ 0.69
CPNE7-207ENST00000564421 KAT2BQ92831 832 aa19.38■□□□□ 0.69
CPNE7-207ENST00000564421 ZNF577Q9BSK1 485 aa19.38■□□□□ 0.69
CPNE7-207ENST00000564421 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.38■□□□□ 0.69
CPNE7-207ENST00000564421 TBC1D22BQ9NU19 505 aa19.38■□□□□ 0.69
CPNE7-207ENST00000564421 DHX15O43143 795 aaKnown RBP19.37■□□□□ 0.69
CPNE7-207ENST00000564421 BAG4O95429 457 aaKnown RBP19.37■□□□□ 0.69
CPNE7-207ENST00000564421 LGALS2P05162 132 aa19.37■□□□□ 0.69
CPNE7-207ENST00000564421 TLE2Q04725 743 aa19.37■□□□□ 0.69
CPNE7-207ENST00000564421 PTPN11Q06124 597 aaPredicted RBP19.37■□□□□ 0.69
CPNE7-207ENST00000564421 C16orf70Q9BSU1 422 aa19.37■□□□□ 0.69
CPNE7-207ENST00000564421 DDX25Q9UHL0 483 aaKnown RBP19.37■□□□□ 0.69
CPNE7-207ENST00000564421 CEP131Q9UPN4 1083 aa19.37■□□□□ 0.69
CPNE7-207ENST00000564421 GSTTP1A0A1W2PQM5 241 aa19.36■□□□□ 0.69
CPNE7-207ENST00000564421 DCDC2CA8MYV0 355 aa19.36■□□□□ 0.69
CPNE7-207ENST00000564421 HAS3O00219 553 aa19.36■□□□□ 0.69
CPNE7-207ENST00000564421 MSH4O15457 936 aa19.36■□□□□ 0.69
CPNE7-207ENST00000564421 PQBP1O60828 265 aaKnown RBP19.36■□□□□ 0.69
CPNE7-207ENST00000564421 ZNF286BP0CG31 522 aa19.36■□□□□ 0.69
CPNE7-207ENST00000564421 ORC2Q13416 577 aaPredicted RBP19.36■□□□□ 0.69
CPNE7-207ENST00000564421 STK38Q15208 465 aa19.36■□□□□ 0.69
CPNE7-207ENST00000564421 NBPF20Q3BBV1 942 aa19.36■□□□□ 0.69
CPNE7-207ENST00000564421 SESTD1Q86VW0 696 aa19.36■□□□□ 0.69
CPNE7-207ENST00000564421 FAM126BQ8IXS8 530 aa19.36■□□□□ 0.69
CPNE7-207ENST00000564421 GBP4Q96PP9 640 aa19.36■□□□□ 0.69
CPNE7-207ENST00000564421 TELO2Q9Y4R8 837 aa19.36■□□□□ 0.69
CPNE7-207ENST00000564421 CEP290O15078 2479 aa19.36■□□□□ 0.69
CPNE7-207ENST00000564421 TLR3O15455 904 aaKnown RBP19.35■□□□□ 0.69
CPNE7-207ENST00000564421 NEMFO60524 1076 aa19.35■□□□□ 0.69
CPNE7-207ENST00000564421 BMP15O95972 392 aa19.35■□□□□ 0.69
CPNE7-207ENST00000564421 CLTBP09497 229 aa19.35■□□□□ 0.69
CPNE7-207ENST00000564421 TCF7P36402 384 aaPredicted RBP19.35■□□□□ 0.69
CPNE7-207ENST00000564421 NASPP49321 788 aaPredicted RBP19.35■□□□□ 0.69
CPNE7-207ENST00000564421 PSEN2P49810 448 aa19.35■□□□□ 0.69
CPNE7-207ENST00000564421 SP4Q02446 784 aa19.35■□□□□ 0.69
CPNE7-207ENST00000564421 MFSD10Q14728 455 aa19.35■□□□□ 0.69
CPNE7-207ENST00000564421 SLC5A5Q92911 643 aa19.35■□□□□ 0.69
CPNE7-207ENST00000564421 RIT2Q99578 217 aa19.35■□□□□ 0.69
CPNE7-207ENST00000564421 SCAND2PQ9GZW5 306 aaPredicted RBP19.35■□□□□ 0.69
CPNE7-207ENST00000564421 EMSYQ7Z589 1322 aa19.34■□□□□ 0.69
CPNE7-207ENST00000564421 H3BRB1 525 aa19.34■□□□□ 0.69
CPNE7-207ENST00000564421 SLC37A4O43826 429 aa19.34■□□□□ 0.69
CPNE7-207ENST00000564421 ATG7O95352 703 aa19.34■□□□□ 0.69
CPNE7-207ENST00000564421 YEATS4O95619 227 aa19.34■□□□□ 0.69
CPNE7-207ENST00000564421 CD4P01730 458 aa19.34■□□□□ 0.69
CPNE7-207ENST00000564421 ACTR2P61160 394 aa19.34■□□□□ 0.69
CPNE7-207ENST00000564421 KRT76Q01546 638 aa19.34■□□□□ 0.69
CPNE7-207ENST00000564421 FAAP100Q0VG06 881 aa19.34■□□□□ 0.69
CPNE7-207ENST00000564421 PTGDRQ13258 359 aa19.34■□□□□ 0.69
CPNE7-207ENST00000564421 PTPAQ15257 358 aa19.34■□□□□ 0.69
CPNE7-207ENST00000564421 KIAA0753Q2KHM9 967 aa19.34■□□□□ 0.69
CPNE7-207ENST00000564421 ZNF746Q6NUN9 644 aaPredicted RBP19.34■□□□□ 0.69
CPNE7-207ENST00000564421 CLEC17AQ6ZS10 378 aa19.34■□□□□ 0.69
CPNE7-207ENST00000564421 POTEDQ86YR6 584 aa19.34■□□□□ 0.69
CPNE7-207ENST00000564421 LINC00301Q8NCQ3 95 aa19.34■□□□□ 0.69
CPNE7-207ENST00000564421 SPATA32Q96LK8 384 aa19.34■□□□□ 0.69
CPNE7-207ENST00000564421 TUT1Q9H6E5 874 aaKnown RBP19.34■□□□□ 0.69
CPNE7-207ENST00000564421 GDPD2Q9HCC8 539 aa19.34■□□□□ 0.69
CPNE7-207ENST00000564421 PDLIM7Q9NR12 457 aa19.34■□□□□ 0.69
CPNE7-207ENST00000564421 TCEAL9Q9UHQ7 104 aa19.34■□□□□ 0.69
CPNE7-207ENST00000564421 ZNF215Q9UL58 517 aaPredicted RBP19.34■□□□□ 0.69
CPNE7-207ENST00000564421 DDX39AO00148 427 aaKnown RBP19.33■□□□□ 0.68
CPNE7-207ENST00000564421 TBX3O15119 743 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms