RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 SAMD11Q96NU1 681 aa10.94□□□□□ -0.66
CLN6-203ENST00000563917 SDF4Q9BRK5 362 aa10.94□□□□□ -0.66
CLN6-203ENST00000563917 SMARCAD1Q9H4L7 1026 aa10.94□□□□□ -0.66
CLN6-203ENST00000563917 PKD2L1Q9P0L9 805 aa10.94□□□□□ -0.66
CLN6-203ENST00000563917 PCDHA6Q9UN73 950 aa10.94□□□□□ -0.66
CLN6-203ENST00000563917 PCDHA8Q9Y5H6 950 aa10.94□□□□□ -0.66
CLN6-203ENST00000563917 UNC80Q8N2C7 3258 aa10.94□□□□□ -0.66
CLN6-203ENST00000563917 CCDC196A0A1B0GTZ2 297 aa10.93□□□□□ -0.66
CLN6-203ENST00000563917 hCG_1642624A0A1W2PR95 340 aa10.93□□□□□ -0.66
CLN6-203ENST00000563917 LCHNA4D1U4 455 aa10.93□□□□□ -0.66
CLN6-203ENST00000563917 LINC01553A4QN01 128 aa10.93□□□□□ -0.66
CLN6-203ENST00000563917 EPOPA6NHQ4 379 aa10.93□□□□□ -0.66
CLN6-203ENST00000563917 RRN3P2A6NIE6 340 aa10.93□□□□□ -0.66
CLN6-203ENST00000563917 M0QZ92 97 aa10.93□□□□□ -0.66
CLN6-203ENST00000563917 CDC45O75419 566 aa10.93□□□□□ -0.66
CLN6-203ENST00000563917 UPP2O95045 317 aa10.93□□□□□ -0.66
CLN6-203ENST00000563917 MARK3P27448 753 aa10.93□□□□□ -0.66
CLN6-203ENST00000563917 HOXC8P31273 242 aa10.93□□□□□ -0.66
CLN6-203ENST00000563917 SEMA3FQ13275 785 aa10.93□□□□□ -0.66
CLN6-203ENST00000563917 HIC1Q14526 733 aa10.93□□□□□ -0.66
CLN6-203ENST00000563917 UBE2SQ16763 222 aa10.93□□□□□ -0.66
CLN6-203ENST00000563917 PPP1R18Q6NYC8 613 aa10.93□□□□□ -0.66
CLN6-203ENST00000563917 TRAF7Q6Q0C0 670 aa10.93□□□□□ -0.66
CLN6-203ENST00000563917 DHX32Q7L7V1 743 aaKnown RBP10.93□□□□□ -0.66
CLN6-203ENST00000563917 FBXO22Q8NEZ5 403 aa10.93□□□□□ -0.66
CLN6-203ENST00000563917 GDPD5Q8WTR4 605 aa10.93□□□□□ -0.66
CLN6-203ENST00000563917 LMBR1Q8WVP7 490 aa10.93□□□□□ -0.66
CLN6-203ENST00000563917 IFIH1Q9BYX4 1025 aaKnown RBP10.93□□□□□ -0.66
CLN6-203ENST00000563917 BCAS3Q9H6U6 928 aa10.93□□□□□ -0.66
CLN6-203ENST00000563917 JADE2Q9NQC1 790 aa10.93□□□□□ -0.66
CLN6-203ENST00000563917 TCEAL9Q9UHQ7 104 aa10.93□□□□□ -0.66
CLN6-203ENST00000563917 KAT6AQ92794 2004 aa10.92□□□□□ -0.66
CLN6-203ENST00000563917 GOLGA8AA7E2F4 631 aa10.92□□□□□ -0.66
CLN6-203ENST00000563917 GOLGA8BA8MQT2 603 aa10.92□□□□□ -0.66
CLN6-203ENST00000563917 KCNA2P16389 499 aa10.92□□□□□ -0.66
CLN6-203ENST00000563917 ADCY7P51828 1080 aa10.92□□□□□ -0.66
CLN6-203ENST00000563917 TFF2Q03403 129 aa10.92□□□□□ -0.66
CLN6-203ENST00000563917 MBTPS1Q14703 1052 aa10.92□□□□□ -0.66
CLN6-203ENST00000563917 GRIK4Q16099 956 aa10.92□□□□□ -0.66
CLN6-203ENST00000563917 APOA5Q6Q788 366 aa10.92□□□□□ -0.66
CLN6-203ENST00000563917 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.92□□□□□ -0.66
CLN6-203ENST00000563917 SUGCTQ9HAC7 445 aa10.92□□□□□ -0.66
CLN6-203ENST00000563917 JPH1Q9HDC5 661 aaPredicted RBP10.92□□□□□ -0.66
CLN6-203ENST00000563917 SLC9A2Q9UBY0 812 aa10.92□□□□□ -0.66
CLN6-203ENST00000563917 TUBE1Q9UJT0 475 aa10.92□□□□□ -0.66
CLN6-203ENST00000563917 TRPC6Q9Y210 931 aa10.92□□□□□ -0.66
CLN6-203ENST00000563917 UBIAD1Q9Y5Z9 338 aa10.92□□□□□ -0.66
CLN6-203ENST00000563917 PRRC2BQ5JSZ5 2229 aaKnown RBP10.91□□□□□ -0.66
CLN6-203ENST00000563917 KLF18A0A0U1RQI7 1052 aa10.91□□□□□ -0.66
CLN6-203ENST00000563917 SMCO2A6NFE2 343 aa10.91□□□□□ -0.66
CLN6-203ENST00000563917 ATP9AO75110 1047 aa10.91□□□□□ -0.66
CLN6-203ENST00000563917 ARHGEF15O94989 841 aa10.91□□□□□ -0.66
CLN6-203ENST00000563917 ITGB5P18084 799 aa10.91□□□□□ -0.66
CLN6-203ENST00000563917 IGBP1P78318 339 aa10.91□□□□□ -0.66
CLN6-203ENST00000563917 AKAP17AQ02040 695 aaKnown RBP10.91□□□□□ -0.66
CLN6-203ENST00000563917 IER5Q5VY09 327 aa10.91□□□□□ -0.66
CLN6-203ENST00000563917 KRT40Q6A162 431 aa10.91□□□□□ -0.66
CLN6-203ENST00000563917 MCTP2Q6DN12 878 aa10.91□□□□□ -0.66
CLN6-203ENST00000563917 FIBCD1Q8N539 461 aa10.91□□□□□ -0.66
CLN6-203ENST00000563917 CCDC12Q8WUD4 166 aaPredicted RBP10.91□□□□□ -0.66
CLN6-203ENST00000563917 TOP1MTQ969P6 601 aa10.91□□□□□ -0.66
CLN6-203ENST00000563917 IL17RAQ96F46 866 aa10.91□□□□□ -0.66
CLN6-203ENST00000563917 MXRA8Q9BRK3 442 aa10.91□□□□□ -0.66
CLN6-203ENST00000563917 RIC8AQ9NPQ8 531 aa10.91□□□□□ -0.66
CLN6-203ENST00000563917 RWDD3Q9Y3V2 267 aa10.91□□□□□ -0.66
CLN6-203ENST00000563917 V9GY48 417 aaPredicted RBP10.91□□□□□ -0.66
CLN6-203ENST00000563917 CDH23Q9H251 3354 aa10.91□□□□□ -0.66
CLN6-203ENST00000563917 GSTTP1A0A1W2PQM5 241 aa10.9□□□□□ -0.66
CLN6-203ENST00000563917 LPXNO60711 386 aa10.9□□□□□ -0.66
CLN6-203ENST00000563917 GHRP10912 638 aa10.9□□□□□ -0.66
CLN6-203ENST00000563917 BMP1P13497 986 aa10.9□□□□□ -0.66
CLN6-203ENST00000563917 METAP2P50579 478 aaKnown RBP eCLIP10.9□□□□□ -0.66
CLN6-203ENST00000563917 RCAN1P53805 252 aa10.9□□□□□ -0.66
CLN6-203ENST00000563917 HTRA4P83105 476 aaPredicted RBP10.9□□□□□ -0.66
CLN6-203ENST00000563917 AP3B2Q13367 1082 aa10.9□□□□□ -0.66
CLN6-203ENST00000563917 TCTN1Q2MV58 587 aa10.9□□□□□ -0.66
CLN6-203ENST00000563917 TIGD5Q53EQ6 642 aa10.9□□□□□ -0.66
CLN6-203ENST00000563917 CEP55Q53EZ4 464 aa10.9□□□□□ -0.66
CLN6-203ENST00000563917 FAM26DQ5JW98 314 aa10.9□□□□□ -0.66
CLN6-203ENST00000563917 WWC2Q6AWC2 1192 aa10.9□□□□□ -0.66
CLN6-203ENST00000563917 RPAINQ86UA6 219 aa10.9□□□□□ -0.66
CLN6-203ENST00000563917 DNAJB3Q8WWF6 145 aa10.9□□□□□ -0.66
CLN6-203ENST00000563917 C17orf80Q9BSJ5 609 aa10.9□□□□□ -0.66
CLN6-203ENST00000563917 C1QTNF1Q9BXJ1 281 aa10.9□□□□□ -0.66
CLN6-203ENST00000563917 ANO3Q9BYT9 981 aa10.9□□□□□ -0.66
CLN6-203ENST00000563917 FAM49AQ9H0Q0 323 aaPredicted RBP10.9□□□□□ -0.66
CLN6-203ENST00000563917 KCNH7Q9NS40 1196 aa10.9□□□□□ -0.66
CLN6-203ENST00000563917 TTC28Q96AY4 2481 aa10.9□□□□□ -0.67
CLN6-203ENST00000563917 DOCK5Q9H7D0 1870 aa10.89□□□□□ -0.67
CLN6-203ENST00000563917 NFASCO94856 1347 aa10.89□□□□□ -0.67
CLN6-203ENST00000563917 CNTNAP5Q8WYK1 1306 aa10.89□□□□□ -0.67
CLN6-203ENST00000563917 BACH1O14867 736 aa10.89□□□□□ -0.67
CLN6-203ENST00000563917 INSRRP14616 1297 aa10.89□□□□□ -0.67
CLN6-203ENST00000563917 SLC26A2P50443 739 aa10.89□□□□□ -0.67
CLN6-203ENST00000563917 STAT5BP51692 787 aa10.89□□□□□ -0.67
CLN6-203ENST00000563917 KCNQ1P51787 676 aa10.89□□□□□ -0.67
CLN6-203ENST00000563917 ADAM17P78536 824 aa10.89□□□□□ -0.67
CLN6-203ENST00000563917 EXOSC10Q01780 885 aaKnown RBP10.89□□□□□ -0.67
CLN6-203ENST00000563917 GPM6BQ13491 265 aa10.89□□□□□ -0.67
CLN6-203ENST00000563917 TSGA10IPQ3SY00 556 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms