RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 RAB11FIP4Q86YS3 637 aa19.34■□□□□ 0.69
HDGFL3-203ENST00000563404 LSG1Q9H089 658 aaKnown RBP19.34■□□□□ 0.69
HDGFL3-203ENST00000563404 ZNF215Q9UL58 517 aaPredicted RBP19.34■□□□□ 0.69
HDGFL3-203ENST00000563404 GSTTP1A0A1W2PQM5 241 aa19.33■□□□□ 0.68
HDGFL3-203ENST00000563404 hCG_1642624A0A1W2PR95 340 aa19.33■□□□□ 0.68
HDGFL3-203ENST00000563404 CHRNA1P02708 482 aa19.33■□□□□ 0.68
HDGFL3-203ENST00000563404 ITGB5P18084 799 aa19.33■□□□□ 0.68
HDGFL3-203ENST00000563404 TCF7P36402 384 aaPredicted RBP19.33■□□□□ 0.68
HDGFL3-203ENST00000563404 NLRX1Q86UT6 975 aa19.33■□□□□ 0.68
HDGFL3-203ENST00000563404 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.33■□□□□ 0.68
HDGFL3-203ENST00000563404 YME1L1Q96TA2 773 aa19.33■□□□□ 0.68
HDGFL3-203ENST00000563404 LZTS2Q9BRK4 669 aa19.33■□□□□ 0.68
HDGFL3-203ENST00000563404 MTA3Q9BTC8 594 aa19.33■□□□□ 0.68
HDGFL3-203ENST00000563404 SEC63Q9UGP8 760 aaKnown RBP19.33■□□□□ 0.68
HDGFL3-203ENST00000563404 MCM5P33992 734 aa19.32■□□□□ 0.68
HDGFL3-203ENST00000563404 MGAT3Q09327 533 aa19.32■□□□□ 0.68
HDGFL3-203ENST00000563404 UBE2SQ16763 222 aa19.32■□□□□ 0.68
HDGFL3-203ENST00000563404 LEXMQ3ZCV2 418 aa19.32■□□□□ 0.68
HDGFL3-203ENST00000563404 NFXL1Q6ZNB6 911 aa19.32■□□□□ 0.68
HDGFL3-203ENST00000563404 GPRASP2Q96D09 838 aa19.32■□□□□ 0.68
HDGFL3-203ENST00000563404 MRPL38Q96DV4 380 aaKnown RBP19.32■□□□□ 0.68
HDGFL3-203ENST00000563404 IFIH1Q9BYX4 1025 aaKnown RBP19.32■□□□□ 0.68
HDGFL3-203ENST00000563404 PSTPIP2Q9H939 334 aa19.32■□□□□ 0.68
HDGFL3-203ENST00000563404 COL4A6Q14031 1691 aa19.32■□□□□ 0.68
HDGFL3-203ENST00000563404 NRCAMQ92823 1304 aa19.31■□□□□ 0.68
HDGFL3-203ENST00000563404 CCDC69A6NI79 296 aa19.31■□□□□ 0.68
HDGFL3-203ENST00000563404 H3BNC9 293 aa19.31■□□□□ 0.68
HDGFL3-203ENST00000563404 SLC27A2O14975 620 aa19.31■□□□□ 0.68
HDGFL3-203ENST00000563404 KCNA5P22460 613 aa19.31■□□□□ 0.68
HDGFL3-203ENST00000563404 GNAQP50148 359 aa19.31■□□□□ 0.68
HDGFL3-203ENST00000563404 RPAINQ86UA6 219 aa19.31■□□□□ 0.68
HDGFL3-203ENST00000563404 TMEM192Q8IY95 271 aa19.31■□□□□ 0.68
HDGFL3-203ENST00000563404 APBB2Q92870 758 aa19.31■□□□□ 0.68
HDGFL3-203ENST00000563404 TMEM87BQ96K49 555 aa19.31■□□□□ 0.68
HDGFL3-203ENST00000563404 SAMD11Q96NU1 681 aa19.31■□□□□ 0.68
HDGFL3-203ENST00000563404 LRFN3Q9BTN0 628 aa19.31■□□□□ 0.68
HDGFL3-203ENST00000563404 LRRC2Q9BYS8 371 aa19.31■□□□□ 0.68
HDGFL3-203ENST00000563404 EHMT1Q9H9B1 1298 aa19.31■□□□□ 0.68
HDGFL3-203ENST00000563404 C11orf16Q9NQ32 467 aa19.31■□□□□ 0.68
HDGFL3-203ENST00000563404 PKD2L1Q9P0L9 805 aa19.31■□□□□ 0.68
HDGFL3-203ENST00000563404 UBIAD1Q9Y5Z9 338 aa19.31■□□□□ 0.68
HDGFL3-203ENST00000563404 CENPBP07199 599 aaPredicted RBP19.3■□□□□ 0.68
HDGFL3-203ENST00000563404 LINC00271P0C7V0 271 aa19.3■□□□□ 0.68
HDGFL3-203ENST00000563404 GHRP10912 638 aa19.3■□□□□ 0.68
HDGFL3-203ENST00000563404 MARK3P27448 753 aa19.3■□□□□ 0.68
HDGFL3-203ENST00000563404 LIFRP42702 1097 aa19.3■□□□□ 0.68
HDGFL3-203ENST00000563404 GPM6BQ13491 265 aa19.3■□□□□ 0.68
HDGFL3-203ENST00000563404 MARCH8Q5T0T0 291 aa19.3■□□□□ 0.68
HDGFL3-203ENST00000563404 CCDC82Q8N4S0 544 aa19.3■□□□□ 0.68
HDGFL3-203ENST00000563404 GIMAP8Q8ND71 665 aaPredicted RBP19.3■□□□□ 0.68
HDGFL3-203ENST00000563404 SEPT1Q8WYJ6 367 aa19.3■□□□□ 0.68
HDGFL3-203ENST00000563404 ZBTB10Q96DT7 871 aa19.3■□□□□ 0.68
HDGFL3-203ENST00000563404 IL9P15248 144 aa19.29■□□□□ 0.68
HDGFL3-203ENST00000563404 PPFIA1Q13136 1202 aa19.29■□□□□ 0.68
HDGFL3-203ENST00000563404 LPIN1Q14693 890 aa19.29■□□□□ 0.68
HDGFL3-203ENST00000563404 CREB3L3Q68CJ9 461 aa19.29■□□□□ 0.68
HDGFL3-203ENST00000563404 TMTC3Q6ZXV5 915 aa19.29■□□□□ 0.68
HDGFL3-203ENST00000563404 TMTC2Q8N394 836 aa19.29■□□□□ 0.68
HDGFL3-203ENST00000563404 PCYT2Q99447 389 aa19.29■□□□□ 0.68
HDGFL3-203ENST00000563404 RC3H2Q9HBD1 1191 aaKnown RBP19.29■□□□□ 0.68
HDGFL3-203ENST00000563404 PCDHA6Q9UN73 950 aa19.29■□□□□ 0.68
HDGFL3-203ENST00000563404 PCDHA8Q9Y5H6 950 aa19.29■□□□□ 0.68
HDGFL3-203ENST00000563404 MBLAC1A4D2B0 266 aaPredicted RBP19.28■□□□□ 0.68
HDGFL3-203ENST00000563404 PLA2G5P39877 138 aa19.28■□□□□ 0.68
HDGFL3-203ENST00000563404 MTMR1Q13613 665 aa19.28■□□□□ 0.68
HDGFL3-203ENST00000563404 NECTIN1Q15223 517 aa19.28■□□□□ 0.68
HDGFL3-203ENST00000563404 GRIK4Q16099 956 aa19.28■□□□□ 0.68
HDGFL3-203ENST00000563404 PTPROQ16827 1216 aa19.28■□□□□ 0.68
HDGFL3-203ENST00000563404 TCEAL5Q5H9L2 206 aa19.28■□□□□ 0.68
HDGFL3-203ENST00000563404 TAF2Q6P1X5 1199 aa19.28■□□□□ 0.68
HDGFL3-203ENST00000563404 FAM178BQ8IXR5 827 aa19.28■□□□□ 0.68
HDGFL3-203ENST00000563404 BANK1Q8NDB2 785 aa19.28■□□□□ 0.68
HDGFL3-203ENST00000563404 NEK9Q8TD19 979 aa19.28■□□□□ 0.68
HDGFL3-203ENST00000563404 DNAJB3Q8WWF6 145 aa19.28■□□□□ 0.68
HDGFL3-203ENST00000563404 IL17RAQ96F46 866 aa19.28■□□□□ 0.68
HDGFL3-203ENST00000563404 CDHR1Q96JP9 859 aa19.28■□□□□ 0.68
HDGFL3-203ENST00000563404 ESYT1Q9BSJ8 1104 aa19.28■□□□□ 0.68
HDGFL3-203ENST00000563404 JADE2Q9NQC1 790 aa19.28■□□□□ 0.68
HDGFL3-203ENST00000563404 ERAP1Q9NZ08 941 aa19.28■□□□□ 0.68
HDGFL3-203ENST00000563404 NLRC5Q86WI3 1866 aa19.28■□□□□ 0.68
HDGFL3-203ENST00000563404 FAM86C2PA6NEL3 165 aa19.27■□□□□ 0.68
HDGFL3-203ENST00000563404 ENPP3O14638 875 aa19.27■□□□□ 0.68
HDGFL3-203ENST00000563404 CALM1P0DP23 149 aa19.27■□□□□ 0.68
HDGFL3-203ENST00000563404 CALM2P0DP24 149 aa19.27■□□□□ 0.68
HDGFL3-203ENST00000563404 CALM3P0DP25 149 aa19.27■□□□□ 0.68
HDGFL3-203ENST00000563404 PTCRAQ6ISU1 281 aaPredicted RBP19.27■□□□□ 0.68
HDGFL3-203ENST00000563404 TYW1BQ6NUM6 668 aa19.27■□□□□ 0.68
HDGFL3-203ENST00000563404 FANCBQ8NB91 859 aa19.27■□□□□ 0.68
HDGFL3-203ENST00000563404 TUBE1Q9UJT0 475 aa19.27■□□□□ 0.68
HDGFL3-203ENST00000563404 SLC12A7Q9Y666 1083 aa19.27■□□□□ 0.68
HDGFL3-203ENST00000563404 KAT6AQ92794 2004 aa19.26■□□□□ 0.67
HDGFL3-203ENST00000563404 GRXCR2A6NFK2 248 aa19.26■□□□□ 0.67
HDGFL3-203ENST00000563404 PI4K2BG5E9Z4 385 aa19.26■□□□□ 0.67
HDGFL3-203ENST00000563404 H3BQ06 376 aaPredicted RBP19.26■□□□□ 0.67
HDGFL3-203ENST00000563404 COL19A1Q14993 1142 aa19.26■□□□□ 0.67
HDGFL3-203ENST00000563404 TIGD5Q53EQ6 642 aa19.26■□□□□ 0.67
HDGFL3-203ENST00000563404 TMEM31Q5JXX7 168 aa19.26■□□□□ 0.67
HDGFL3-203ENST00000563404 FBXO47Q5MNV8 452 aa19.26■□□□□ 0.67
HDGFL3-203ENST00000563404 HEATR3Q7Z4Q2 680 aa19.26■□□□□ 0.67
HDGFL3-203ENST00000563404 FIBCD1Q8N539 461 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms