RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 KCNQ1P51787 676 aa18.09■□□□□ 0.49
CLK3-211ENST00000563297 TMTC3Q6ZXV5 915 aa18.09■□□□□ 0.49
CLK3-211ENST00000563297 GDPD5Q8WTR4 605 aa18.09■□□□□ 0.49
CLK3-211ENST00000563297 SEPT8Q92599 483 aa18.09■□□□□ 0.49
CLK3-211ENST00000563297 ZNF215Q9UL58 517 aaPredicted RBP18.09■□□□□ 0.49
CLK3-211ENST00000563297 MTUS1Q9ULD2 1270 aa18.09■□□□□ 0.49
CLK3-211ENST00000563297 COG5Q9UP83 839 aa18.09■□□□□ 0.49
CLK3-211ENST00000563297 UBIAD1Q9Y5Z9 338 aa18.09■□□□□ 0.49
CLK3-211ENST00000563297 GSTTP1A0A1W2PQM5 241 aa18.08■□□□□ 0.48
CLK3-211ENST00000563297 CTSHP09668 335 aa18.08■□□□□ 0.48
CLK3-211ENST00000563297 TCF7P36402 384 aaPredicted RBP18.08■□□□□ 0.48
CLK3-211ENST00000563297 HTRA4P83105 476 aaPredicted RBP18.08■□□□□ 0.48
CLK3-211ENST00000563297 ARHGAP4P98171 946 aa18.08■□□□□ 0.48
CLK3-211ENST00000563297 UBE2SQ16763 222 aa18.08■□□□□ 0.48
CLK3-211ENST00000563297 FAM26DQ5JW98 314 aa18.08■□□□□ 0.48
CLK3-211ENST00000563297 MYOCDQ8IZQ8 938 aa18.08■□□□□ 0.48
CLK3-211ENST00000563297 LMBR1Q8WVP7 490 aa18.08■□□□□ 0.48
CLK3-211ENST00000563297 SEPT1Q8WYJ6 367 aa18.08■□□□□ 0.48
CLK3-211ENST00000563297 CDHR1Q96JP9 859 aa18.08■□□□□ 0.48
CLK3-211ENST00000563297 NECAB3Q96P71 396 aaPredicted RBP18.08■□□□□ 0.48
CLK3-211ENST00000563297 PCDHA6Q9UN73 950 aa18.08■□□□□ 0.48
CLK3-211ENST00000563297 PCDHA8Q9Y5H6 950 aa18.08■□□□□ 0.48
CLK3-211ENST00000563297 BDP1A6H8Y1 2624 aa18.07■□□□□ 0.48
CLK3-211ENST00000563297 NRCAMQ92823 1304 aa18.07■□□□□ 0.48
CLK3-211ENST00000563297 BMP2KLQ5H9B9 411 aa18.07■□□□□ 0.48
CLK3-211ENST00000563297 SKAP1Q86WV1 359 aa18.07■□□□□ 0.48
CLK3-211ENST00000563297 MICU3Q86XE3 530 aa18.07■□□□□ 0.48
CLK3-211ENST00000563297 HLA-CQ95604 372 aa18.07■□□□□ 0.48
CLK3-211ENST00000563297 TOP1MTQ969P6 601 aa18.07■□□□□ 0.48
CLK3-211ENST00000563297 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.06■□□□□ 0.48
CLK3-211ENST00000563297 SPDYE3A6NKU9 549 aa18.06■□□□□ 0.48
CLK3-211ENST00000563297 MAFGO15525 162 aa18.06■□□□□ 0.48
CLK3-211ENST00000563297 EXOSC10Q01780 885 aaKnown RBP18.06■□□□□ 0.48
CLK3-211ENST00000563297 SYNE3Q6ZMZ3 975 aa18.06■□□□□ 0.48
CLK3-211ENST00000563297 SP7Q8TDD2 431 aaPredicted RBP18.06■□□□□ 0.48
CLK3-211ENST00000563297 NEK1Q96PY6 1258 aa18.06■□□□□ 0.48
CLK3-211ENST00000563297 C17orf80Q9BSJ5 609 aa18.06■□□□□ 0.48
CLK3-211ENST00000563297 JADE2Q9NQC1 790 aa18.06■□□□□ 0.48
CLK3-211ENST00000563297 SIP14410 1827 aa18.06■□□□□ 0.48
CLK3-211ENST00000563297 COL4A4P53420 1690 aaPredicted RBP18.06■□□□□ 0.48
CLK3-211ENST00000563297 CHRNA1P02708 482 aa18.05■□□□□ 0.48
CLK3-211ENST00000563297 MTMR1Q13613 665 aa18.05■□□□□ 0.48
CLK3-211ENST00000563297 RNF20Q5VTR2 975 aa18.05■□□□□ 0.48
CLK3-211ENST00000563297 APOA5Q6Q788 366 aa18.05■□□□□ 0.48
CLK3-211ENST00000563297 HEATR3Q7Z4Q2 680 aa18.05■□□□□ 0.48
CLK3-211ENST00000563297 RPAINQ86UA6 219 aa18.05■□□□□ 0.48
CLK3-211ENST00000563297 PKD2L1Q9P0L9 805 aa18.05■□□□□ 0.48
CLK3-211ENST00000563297 UPP2O95045 317 aa18.04■□□□□ 0.48
CLK3-211ENST00000563297 FUT2Q10981 343 aa18.04■□□□□ 0.48
CLK3-211ENST00000563297 TSGA10IPQ3SY00 556 aa18.04■□□□□ 0.48
CLK3-211ENST00000563297 WWC2Q6AWC2 1192 aa18.04■□□□□ 0.48
CLK3-211ENST00000563297 TYW1BQ6NUM6 668 aa18.04■□□□□ 0.48
CLK3-211ENST00000563297 RUFY4Q6ZNE9 571 aa18.04■□□□□ 0.48
CLK3-211ENST00000563297 DHX32Q7L7V1 743 aaKnown RBP18.04■□□□□ 0.48
CLK3-211ENST00000563297 RASEFQ8IZ41 740 aa18.04■□□□□ 0.48
CLK3-211ENST00000563297 FBXO22Q8NEZ5 403 aa18.04■□□□□ 0.48
CLK3-211ENST00000563297 APBB2Q92870 758 aa18.04■□□□□ 0.48
CLK3-211ENST00000563297 TCEANC2Q96MN5 208 aa18.04■□□□□ 0.48
CLK3-211ENST00000563297 IFIH1Q9BYX4 1025 aaKnown RBP18.04■□□□□ 0.48
CLK3-211ENST00000563297 SMARCAD1Q9H4L7 1026 aa18.04■□□□□ 0.48
CLK3-211ENST00000563297 ERAP1Q9NZ08 941 aa18.04■□□□□ 0.48
CLK3-211ENST00000563297 BRPF3Q9ULD4 1205 aa18.04■□□□□ 0.48
CLK3-211ENST00000563297 MARK3P27448 753 aa18.03■□□□□ 0.48
CLK3-211ENST00000563297 PPFIA1Q13136 1202 aa18.03■□□□□ 0.48
CLK3-211ENST00000563297 ADCK5Q3MIX3 580 aa18.03■□□□□ 0.48
CLK3-211ENST00000563297 MARCH8Q5T0T0 291 aa18.03■□□□□ 0.48
CLK3-211ENST00000563297 TAF2Q6P1X5 1199 aa18.03■□□□□ 0.48
CLK3-211ENST00000563297 CYP2W1Q8TAV3 490 aa18.03■□□□□ 0.48
CLK3-211ENST00000563297 GLG1Q92896 1179 aa18.03■□□□□ 0.48
CLK3-211ENST00000563297 PCYT2Q99447 389 aa18.03■□□□□ 0.48
CLK3-211ENST00000563297 MXRA8Q9BRK3 442 aa18.03■□□□□ 0.48
CLK3-211ENST00000563297 EHMT1Q9H9B1 1298 aa18.03■□□□□ 0.48
CLK3-211ENST00000563297 RIC8AQ9NPQ8 531 aa18.03■□□□□ 0.48
CLK3-211ENST00000563297 RBM28Q9NW13 759 aaKnown RBP18.03■□□□□ 0.48
CLK3-211ENST00000563297 V9GY48 417 aaPredicted RBP18.03■□□□□ 0.48
CLK3-211ENST00000563297 MYO7AQ13402 2215 aa18.03■□□□□ 0.48
CLK3-211ENST00000563297 CNTNAP5Q8WYK1 1306 aa18.02■□□□□ 0.48
CLK3-211ENST00000563297 MBLAC1A4D2B0 266 aaPredicted RBP18.02■□□□□ 0.48
CLK3-211ENST00000563297 MGAT3Q09327 533 aa18.02■□□□□ 0.48
CLK3-211ENST00000563297 GRIK4Q16099 956 aa18.02■□□□□ 0.48
CLK3-211ENST00000563297 EPC2Q52LR7 807 aa18.02■□□□□ 0.48
CLK3-211ENST00000563297 CENPQQ7L2Z9 268 aaPredicted RBP18.02■□□□□ 0.48
CLK3-211ENST00000563297 YME1L1Q96TA2 773 aa18.02■□□□□ 0.48
CLK3-211ENST00000563297 KCNH7Q9NS40 1196 aa18.02■□□□□ 0.48
CLK3-211ENST00000563297 FAM217BQ9NTX9 383 aaPredicted RBP18.02■□□□□ 0.48
CLK3-211ENST00000563297 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.01■□□□□ 0.47
CLK3-211ENST00000563297 ZBTB43O43298 467 aa18.01■□□□□ 0.47
CLK3-211ENST00000563297 GHRP10912 638 aa18.01■□□□□ 0.47
CLK3-211ENST00000563297 NAPAP54920 295 aa18.01■□□□□ 0.47
CLK3-211ENST00000563297 LPIN1Q14693 890 aa18.01■□□□□ 0.47
CLK3-211ENST00000563297 RTN1Q16799 776 aa18.01■□□□□ 0.47
CLK3-211ENST00000563297 DNAJB3Q8WWF6 145 aa18.01■□□□□ 0.47
CLK3-211ENST00000563297 PGBD1Q96JS3 809 aa18.01■□□□□ 0.47
CLK3-211ENST00000563297 SAMD11Q96NU1 681 aa18.01■□□□□ 0.47
CLK3-211ENST00000563297 SLC9A2Q9UBY0 812 aa18.01■□□□□ 0.47
CLK3-211ENST00000563297 TUBE1Q9UJT0 475 aa18.01■□□□□ 0.47
CLK3-211ENST00000563297 FOSP01100 380 aaPredicted RBP18■□□□□ 0.47
CLK3-211ENST00000563297 ARP10275 920 aa18■□□□□ 0.47
CLK3-211ENST00000563297 INSRRP14616 1297 aa18■□□□□ 0.47
CLK3-211ENST00000563297 COL9A1P20849 921 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms