RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 PCYT2Q99447 389 aa21.24■□□□□ 0.99
CDH11-206ENST00000562998 WNT8AQ9H1J5 351 aa21.24■□□□□ 0.99
CDH11-206ENST00000562998 IPO5O00410 1097 aaKnown RBP21.23■□□□□ 0.99
CDH11-206ENST00000562998 ST18O60284 1047 aa21.23■□□□□ 0.99
CDH11-206ENST00000562998 CCNE2O96020 404 aa21.23■□□□□ 0.99
CDH11-206ENST00000562998 CYP2C18P33260 490 aa21.23■□□□□ 0.99
CDH11-206ENST00000562998 FPGSQ05932 587 aa21.23■□□□□ 0.99
CDH11-206ENST00000562998 RBL2Q08999 1139 aa21.23■□□□□ 0.99
CDH11-206ENST00000562998 MOXD1Q6UVY6 613 aa21.23■□□□□ 0.99
CDH11-206ENST00000562998 C7orf31Q8N865 590 aa21.23■□□□□ 0.99
CDH11-206ENST00000562998 VWCEQ96DN2 955 aa21.23■□□□□ 0.99
CDH11-206ENST00000562998 SDF4Q9BRK5 362 aa21.23■□□□□ 0.99
CDH11-206ENST00000562998 PPP1R12CQ9BZL4 782 aa21.23■□□□□ 0.99
CDH11-206ENST00000562998 EMSYQ7Z589 1322 aa21.23■□□□□ 0.99
CDH11-206ENST00000562998 IGKV6D-21A0A0A0MT36 114 aa21.22■□□□□ 0.99
CDH11-206ENST00000562998 ACTR2P61160 394 aa21.22■□□□□ 0.99
CDH11-206ENST00000562998 ADAM17P78536 824 aa21.22■□□□□ 0.99
CDH11-206ENST00000562998 NONOQ15233 471 aaKnown RBP eCLIP21.22■□□□□ 0.99
CDH11-206ENST00000562998 PTGISQ16647 500 aa21.22■□□□□ 0.99
CDH11-206ENST00000562998 Q4G0T1 1027 aa21.22■□□□□ 0.99
CDH11-206ENST00000562998 PRR16Q569H4 304 aa21.22■□□□□ 0.99
CDH11-206ENST00000562998 C16orf59Q7L2K0 433 aa21.22■□□□□ 0.99
CDH11-206ENST00000562998 DHX38Q92620 1227 aaKnown RBP21.22■□□□□ 0.99
CDH11-206ENST00000562998 TRIP12Q14669 1992 aaPredicted RBP21.21■□□□□ 0.99
CDH11-206ENST00000562998 PITPNM1O00562 1244 aa21.21■□□□□ 0.99
CDH11-206ENST00000562998 MSH4O15457 936 aa21.21■□□□□ 0.99
CDH11-206ENST00000562998 MMP1P03956 469 aa21.21■□□□□ 0.99
CDH11-206ENST00000562998 CSF2RAP15509 400 aa21.21■□□□□ 0.99
CDH11-206ENST00000562998 FXR1P51114 621 aaKnown RBP eCLIP21.21■□□□□ 0.99
CDH11-206ENST00000562998 CHMP4BP1P59074 171 aa21.21■□□□□ 0.99
CDH11-206ENST00000562998 LRIT3Q3SXY7 679 aa21.21■□□□□ 0.99
CDH11-206ENST00000562998 EARS2Q5JPH6 523 aaKnown RBP21.21■□□□□ 0.99
CDH11-206ENST00000562998 UTP14CQ5TAP6 766 aaKnown RBP21.21■□□□□ 0.99
CDH11-206ENST00000562998 ZNF577Q9BSK1 485 aa21.21■□□□□ 0.99
CDH11-206ENST00000562998 RNPEPQ9H4A4 650 aa21.21■□□□□ 0.99
CDH11-206ENST00000562998 TBC1D22BQ9NU19 505 aa21.21■□□□□ 0.99
CDH11-206ENST00000562998 LAMA2P24043 3122 aaKnown RBP21.2■□□□□ 0.98
CDH11-206ENST00000562998 TDP2O95551 362 aa21.2■□□□□ 0.98
CDH11-206ENST00000562998 SMIM10L2AP0DMW4 78 aa21.2■□□□□ 0.98
CDH11-206ENST00000562998 SMIM10L2BP0DMW5 78 aa21.2■□□□□ 0.98
CDH11-206ENST00000562998 ZNF200P98182 395 aaPredicted RBP21.2■□□□□ 0.98
CDH11-206ENST00000562998 SHHQ15465 462 aa21.2■□□□□ 0.98
CDH11-206ENST00000562998 INF2Q27J81 1249 aa21.2■□□□□ 0.98
CDH11-206ENST00000562998 TRIM71Q2Q1W2 868 aaKnown RBP21.2■□□□□ 0.98
CDH11-206ENST00000562998 C9orf50Q5SZB4 431 aa21.2■□□□□ 0.98
CDH11-206ENST00000562998 KRT40Q6A162 431 aa21.2■□□□□ 0.98
CDH11-206ENST00000562998 ABHD15Q6UXT9 468 aa21.2■□□□□ 0.98
CDH11-206ENST00000562998 TMEM199Q8N511 208 aa21.2■□□□□ 0.98
CDH11-206ENST00000562998 SMARCAD1Q9H4L7 1026 aa21.2■□□□□ 0.98
CDH11-206ENST00000562998 ZNF215Q9UL58 517 aaPredicted RBP21.2■□□□□ 0.98
CDH11-206ENST00000562998 KRT2P35908 639 aa21.19■□□□□ 0.98
CDH11-206ENST00000562998 HMGN5P82970 282 aaKnown RBP21.19■□□□□ 0.98
CDH11-206ENST00000562998 NR5A1Q13285 461 aa21.19■□□□□ 0.98
CDH11-206ENST00000562998 PTK7Q13308 1070 aa21.19■□□□□ 0.98
CDH11-206ENST00000562998 SERINC5Q86VE9 423 aa21.19■□□□□ 0.98
CDH11-206ENST00000562998 CAGE1Q8TC20 777 aa21.19■□□□□ 0.98
CDH11-206ENST00000562998 SLC5A5Q92911 643 aa21.19■□□□□ 0.98
CDH11-206ENST00000562998 TMX3Q96JJ7 454 aa21.19■□□□□ 0.98
CDH11-206ENST00000562998 RIT2Q99578 217 aa21.19■□□□□ 0.98
CDH11-206ENST00000562998 ERAP1Q9NZ08 941 aa21.19■□□□□ 0.98
CDH11-206ENST00000562998 TANC1Q9C0D5 1861 aa21.19■□□□□ 0.98
CDH11-206ENST00000562998 CCDC194A0A1B0GVG4 234 aa21.18■□□□□ 0.98
CDH11-206ENST00000562998 MCM2P49736 904 aa21.18■□□□□ 0.98
CDH11-206ENST00000562998 CCL23P55773 120 aa21.18■□□□□ 0.98
CDH11-206ENST00000562998 PPIGQ13427 754 aaKnown RBP eCLIP21.18■□□□□ 0.98
CDH11-206ENST00000562998 PPP4R3AQ6IN85 833 aa21.18■□□□□ 0.98
CDH11-206ENST00000562998 ZNF746Q6NUN9 644 aaPredicted RBP21.18■□□□□ 0.98
CDH11-206ENST00000562998 B3GNT9Q6UX72 402 aa21.18■□□□□ 0.98
CDH11-206ENST00000562998 PIK3AP1Q6ZUJ8 805 aa21.18■□□□□ 0.98
CDH11-206ENST00000562998 PLPPR4Q7Z2D5 763 aa21.18■□□□□ 0.98
CDH11-206ENST00000562998 ETNPPLQ8TBG4 499 aa21.18■□□□□ 0.98
CDH11-206ENST00000562998 AFAP1L1Q8TED9 768 aa21.18■□□□□ 0.98
CDH11-206ENST00000562998 WNT8BQ93098 351 aa21.18■□□□□ 0.98
CDH11-206ENST00000562998 C17orf102A2RUQ5 167 aa21.17■□□□□ 0.98
CDH11-206ENST00000562998 FAM205CA6NFA0 338 aa21.17■□□□□ 0.98
CDH11-206ENST00000562998 BTBD18B2RXH4 712 aa21.17■□□□□ 0.98
CDH11-206ENST00000562998 PSMD10O75832 226 aa21.17■□□□□ 0.98
CDH11-206ENST00000562998 IQCF3P0C7M6 154 aa21.17■□□□□ 0.98
CDH11-206ENST00000562998 BFSP2Q13515 415 aa21.17■□□□□ 0.98
CDH11-206ENST00000562998 TMEM240Q5SV17 173 aa21.17■□□□□ 0.98
CDH11-206ENST00000562998 RASIP1Q5U651 963 aa21.17■□□□□ 0.98
CDH11-206ENST00000562998 TRAF7Q6Q0C0 670 aa21.17■□□□□ 0.98
CDH11-206ENST00000562998 NEK8Q86SG6 692 aa21.17■□□□□ 0.98
CDH11-206ENST00000562998 DIS3L2Q8IYB7 885 aaKnown RBP21.17■□□□□ 0.98
CDH11-206ENST00000562998 UIMC1Q96RL1 719 aa21.17■□□□□ 0.98
CDH11-206ENST00000562998 IL23AQ9NPF7 189 aa21.17■□□□□ 0.98
CDH11-206ENST00000562998 SETD4Q9NVD3 440 aa21.17■□□□□ 0.98
CDH11-206ENST00000562998 NOD1Q9Y239 953 aa21.17■□□□□ 0.98
CDH11-206ENST00000562998 SZT2Q5T011 3432 aa21.16■□□□□ 0.98
CDH11-206ENST00000562998 NRCAMQ92823 1304 aa21.16■□□□□ 0.98
CDH11-206ENST00000562998 DDX39AO00148 427 aaKnown RBP21.16■□□□□ 0.98
CDH11-206ENST00000562998 SOX1O00570 391 aaPredicted RBP21.16■□□□□ 0.98
CDH11-206ENST00000562998 SLC37A4O43826 429 aa21.16■□□□□ 0.98
CDH11-206ENST00000562998 STAT5BP51692 787 aa21.16■□□□□ 0.98
CDH11-206ENST00000562998 KRT76Q01546 638 aa21.16■□□□□ 0.98
CDH11-206ENST00000562998 GPNMBQ14956 572 aa21.16■□□□□ 0.98
CDH11-206ENST00000562998 SMAP1Q8IYB5 467 aaPredicted RBP21.16■□□□□ 0.98
CDH11-206ENST00000562998 FBXO18Q8NFZ0 1043 aa21.16■□□□□ 0.98
CDH11-206ENST00000562998 LMBR1Q8WVP7 490 aa21.16■□□□□ 0.98
CDH11-206ENST00000562998 GLG1Q92896 1179 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms