RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 USP17L1Q7RTZ2 530 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 FMNL3Q8IVF7 1028 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 MAPKAPK5Q8IW41 473 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 NEK11Q8NG66 645 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.29□□□□□ -1.08
CFDP1-202ENST00000562602 RAD54LQ92698 747 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 CUL5Q93034 780 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 CCDC17Q96LX7 622 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 CRAMP1Q96RY5 1269 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 CHP1Q99653 195 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 CRACR2AQ9BSW2 395 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 FAM107BQ9H098 131 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 NDST4Q9H3R1 872 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 DEF6Q9H4E7 631 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 USP21Q9UK80 565 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 TRIM49BA6NDI0 452 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 SMIM22K7EJ46 135 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 AKR1B10O60218 316 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 TTLL1O95922 423 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 RHOXF2BP0C7M4 288 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 SNHG28P0DPA3 235 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 IDEP14735 1019 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 HOXA10P31260 410 aaPredicted RBP8.28□□□□□ -1.08
CFDP1-202ENST00000562602 GJA5P36382 358 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 USP11P51784 963 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 PMS1P54277 932 aaKnown RBP8.28□□□□□ -1.08
CFDP1-202ENST00000562602 HERVK_113P62684 666 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 VSNL1P62760 191 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 APBA1Q02410 837 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 STK4Q13043 487 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 NNTQ13423 1086 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 MTMR2Q13614 643 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 MCM6Q14566 821 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 IFI16Q16666 785 aaKnown RBP8.28□□□□□ -1.08
CFDP1-202ENST00000562602 CCDC96Q2M329 555 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 SLC9C1Q4G0N8 1177 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 TMEM119Q4V9L6 283 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 MIIPQ5JXC2 388 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 HYIQ5T013 277 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 LCE2CQ5TA81 110 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 RSBN1LQ6PCB5 846 aaPredicted RBP8.28□□□□□ -1.08
CFDP1-202ENST00000562602 CCDC65Q8IXS2 484 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 SLFN12Q8IYM2 578 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 MYOCDQ8IZQ8 938 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 RASGRP4Q8TDF6 673 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 NOX5Q96PH1 765 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 PNKPQ96T60 521 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 RHOXF2Q9BQY4 288 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 IFIH1Q9BYX4 1025 aaKnown RBP8.28□□□□□ -1.08
CFDP1-202ENST00000562602 COA1Q9GZY4 146 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 ZSWIM4Q9H7M6 989 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 PDE11AQ9HCR9 933 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 MTMR4Q9NYA4 1195 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 SNX12Q9UMY4 172 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 MAPK8IP1Q9UQF2 711 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 REXO2Q9Y3B8 237 aaKnown RBP8.28□□□□□ -1.08
CFDP1-202ENST00000562602 DAAM1Q9Y4D1 1078 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 HYOU1Q9Y4L1 999 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 PCDHA13Q9Y5I0 950 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 BZW2Q9Y6E2 419 aaKnown RBP8.28□□□□□ -1.08
CFDP1-202ENST00000562602 ATP8B3O60423 1300 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 PITPNM2Q9BZ72 1349 aa8.28□□□□□ -1.08
CFDP1-202ENST00000562602 CASZ1Q86V15 1759 aa8.27□□□□□ -1.08
CFDP1-202ENST00000562602 BAZ2AQ9UIF9 1905 aaKnown RBP8.27□□□□□ -1.09
CFDP1-202ENST00000562602 PP2D1A8MPX8 630 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 RNF225M0QZC1 329 aaPredicted RBP8.27□□□□□ -1.09
CFDP1-202ENST00000562602 CES2O00748 559 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 TBX3O15119 743 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 OPA1O60313 960 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 UFL1O94874 794 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 ALDH1A1P00352 501 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 HLA-DOAP06340 250 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 PDHBP11177 359 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 VEGFAP15692 232 aaPredicted RBP8.27□□□□□ -1.09
CFDP1-202ENST00000562602 TNFRSF8P28908 595 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 CDC25AP30304 524 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 TXKP42681 527 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 MAGEA1P43355 309 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 MARSP56192 900 aaKnown RBP8.27□□□□□ -1.09
CFDP1-202ENST00000562602 KCNH2Q12809 1159 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 NFX1Q12986 1120 aaKnown RBP8.27□□□□□ -1.09
CFDP1-202ENST00000562602 GRB10Q13322 594 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 ZSCAN26Q16670 478 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 CCDC181Q5TID7 509 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 ALS2CLQ60I27 953 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 HAUS3Q68CZ6 603 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 DESI1Q6ICB0 168 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 EMBQ6PCB8 327 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 CCNI2Q6ZMN8 369 aaPredicted RBP8.27□□□□□ -1.09
CFDP1-202ENST00000562602 GBP6Q6ZN66 633 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 CACNA2D4Q7Z3S7 1137 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 TXNRD3Q86VQ6 643 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 EIF1ADQ8N9N8 165 aaKnown RBP8.27□□□□□ -1.09
CFDP1-202ENST00000562602 ERMNQ8TAM6 284 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 COG1Q8WTW3 980 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 BAP1Q92560 729 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 CEP95Q96GE4 821 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 PIGSQ96S52 555 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 MMTAG2Q9BU76 263 aaKnown RBP8.27□□□□□ -1.09
CFDP1-202ENST00000562602 MXD3Q9BW11 206 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms