RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 ZNF215Q9UL58 517 aaPredicted RBP18.94■□□□□ 0.62
CLK3-207ENST00000562389 DDX39AO00148 427 aaKnown RBP18.93■□□□□ 0.62
CLK3-207ENST00000562389 KIAA0355O15063 1070 aa18.93■□□□□ 0.62
CLK3-207ENST00000562389 SLC37A4O43826 429 aa18.93■□□□□ 0.62
CLK3-207ENST00000562389 B4GALT4O60513 344 aa18.93■□□□□ 0.62
CLK3-207ENST00000562389 CCNT1O60563 726 aaKnown RBP18.93■□□□□ 0.62
CLK3-207ENST00000562389 LGR5O75473 907 aa18.93■□□□□ 0.62
CLK3-207ENST00000562389 CCNE2O96020 404 aa18.93■□□□□ 0.62
CLK3-207ENST00000562389 SYN1P17600 705 aa18.93■□□□□ 0.62
CLK3-207ENST00000562389 KRT76Q01546 638 aa18.93■□□□□ 0.62
CLK3-207ENST00000562389 FAM47CQ5HY64 1035 aa18.93■□□□□ 0.62
CLK3-207ENST00000562389 UTP14CQ5TAP6 766 aaKnown RBP18.93■□□□□ 0.62
CLK3-207ENST00000562389 ZNF746Q6NUN9 644 aaPredicted RBP18.93■□□□□ 0.62
CLK3-207ENST00000562389 SH3RF1Q7Z6J0 888 aa18.93■□□□□ 0.62
CLK3-207ENST00000562389 TRIM50Q86XT4 487 aa18.93■□□□□ 0.62
CLK3-207ENST00000562389 ETNPPLQ8TBG4 499 aa18.93■□□□□ 0.62
CLK3-207ENST00000562389 INTS4Q96HW7 963 aaKnown RBP18.93■□□□□ 0.62
CLK3-207ENST00000562389 RIT2Q99578 217 aa18.93■□□□□ 0.62
CLK3-207ENST00000562389 PRDM5Q9NQX1 630 aaPredicted RBP18.93■□□□□ 0.62
CLK3-207ENST00000562389 TCEAL9Q9UHQ7 104 aa18.93■□□□□ 0.62
CLK3-207ENST00000562389 TBX21Q9UL17 535 aa18.93■□□□□ 0.62
CLK3-207ENST00000562389 WDR81Q562E7 1941 aa18.93■□□□□ 0.62
CLK3-207ENST00000562389 TRIM43BA6NCK2 446 aa18.92■□□□□ 0.62
CLK3-207ENST00000562389 SUPT20HL2P0C7V6 817 aa18.92■□□□□ 0.62
CLK3-207ENST00000562389 U2AF2P26368 475 aaKnown RBP eCLIP18.92■□□□□ 0.62
CLK3-207ENST00000562389 CHMP4BP1P59074 171 aa18.92■□□□□ 0.62
CLK3-207ENST00000562389 GNL2Q13823 731 aaKnown RBP18.92■□□□□ 0.62
CLK3-207ENST00000562389 SMAP1Q8IYB5 467 aaPredicted RBP18.92■□□□□ 0.62
CLK3-207ENST00000562389 C7orf31Q8N865 590 aa18.92■□□□□ 0.62
CLK3-207ENST00000562389 TRIM43Q96BQ3 446 aaPredicted RBP18.92■□□□□ 0.62
CLK3-207ENST00000562389 UIMC1Q96RL1 719 aa18.92■□□□□ 0.62
CLK3-207ENST00000562389 SMARCAD1Q9H4L7 1026 aa18.92■□□□□ 0.62
CLK3-207ENST00000562389 KCNMB3Q9NPA1 279 aa18.92■□□□□ 0.62
CLK3-207ENST00000562389 TMEM39AQ9NV64 488 aa18.92■□□□□ 0.62
CLK3-207ENST00000562389 GTF2IRD1Q9UHL9 959 aa18.92■□□□□ 0.62
CLK3-207ENST00000562389 IGKV6D-21A0A0A0MT36 114 aa18.91■□□□□ 0.62
CLK3-207ENST00000562389 KIF28PB7ZC32 967 aa18.91■□□□□ 0.62
CLK3-207ENST00000562389 TBX3O15119 743 aa18.91■□□□□ 0.62
CLK3-207ENST00000562389 GAS7O60861 476 aa18.91■□□□□ 0.62
CLK3-207ENST00000562389 PSMD10O75832 226 aa18.91■□□□□ 0.62
CLK3-207ENST00000562389 LRCH2Q5VUJ6 765 aa18.91■□□□□ 0.62
CLK3-207ENST00000562389 ABHD15Q6UXT9 468 aa18.91■□□□□ 0.62
CLK3-207ENST00000562389 NOSTRINQ8IVI9 506 aa18.91■□□□□ 0.62
CLK3-207ENST00000562389 HSCBQ8IWL3 235 aa18.91■□□□□ 0.62
CLK3-207ENST00000562389 PPP1R13LQ8WUF5 828 aa18.91■□□□□ 0.62
CLK3-207ENST00000562389 PCYT2Q99447 389 aa18.91■□□□□ 0.62
CLK3-207ENST00000562389 TEKT3Q9BXF9 490 aa18.91■□□□□ 0.62
CLK3-207ENST00000562389 TRPV6Q9H1D0 765 aa18.91■□□□□ 0.62
CLK3-207ENST00000562389 TRMT13Q9NUP7 481 aaKnown RBP18.91■□□□□ 0.62
CLK3-207ENST00000562389 ERAP1Q9NZ08 941 aa18.91■□□□□ 0.62
CLK3-207ENST00000562389 HDAC6Q9UBN7 1215 aa18.91■□□□□ 0.62
CLK3-207ENST00000562389 DNAH12Q6ZR08 3092 aa18.9■□□□□ 0.62
CLK3-207ENST00000562389 MYH9P35579 1960 aaKnown RBP18.9■□□□□ 0.62
CLK3-207ENST00000562389 KAT6AQ92794 2004 aa18.9■□□□□ 0.62
CLK3-207ENST00000562389 HOXC8P31273 242 aa18.9■□□□□ 0.62
CLK3-207ENST00000562389 GDF6Q6KF10 455 aaPredicted RBP18.9■□□□□ 0.62
CLK3-207ENST00000562389 MIS18BP1Q6P0N0 1132 aa18.9■□□□□ 0.62
CLK3-207ENST00000562389 PLPPR4Q7Z2D5 763 aa18.9■□□□□ 0.62
CLK3-207ENST00000562389 POTEDQ86YR6 584 aa18.9■□□□□ 0.62
CLK3-207ENST00000562389 GLG1Q92896 1179 aa18.9■□□□□ 0.62
CLK3-207ENST00000562389 FAM20AQ96MK3 541 aa18.9■□□□□ 0.62
CLK3-207ENST00000562389 AZI2Q9H6S1 392 aa18.9■□□□□ 0.62
CLK3-207ENST00000562389 TRIP12Q14669 1992 aaPredicted RBP18.9■□□□□ 0.62
CLK3-207ENST00000562389 WDR64B1ANS9 1081 aa18.89■□□□□ 0.61
CLK3-207ENST00000562389 H3BQV1 296 aa18.89■□□□□ 0.61
CLK3-207ENST00000562389 WNT7AO00755 349 aa18.89■□□□□ 0.61
CLK3-207ENST00000562389 SMIM10L2AP0DMW4 78 aa18.89■□□□□ 0.61
CLK3-207ENST00000562389 SMIM10L2BP0DMW5 78 aa18.89■□□□□ 0.61
CLK3-207ENST00000562389 TRAPPC10P48553 1259 aa18.89■□□□□ 0.61
CLK3-207ENST00000562389 LARP1BQ659C4 914 aaKnown RBP18.89■□□□□ 0.61
CLK3-207ENST00000562389 B3GNT9Q6UX72 402 aa18.89■□□□□ 0.61
CLK3-207ENST00000562389 AFAP1L1Q8TED9 768 aa18.89■□□□□ 0.61
CLK3-207ENST00000562389 GJA10Q969M2 543 aa18.89■□□□□ 0.61
CLK3-207ENST00000562389 PCDHA10Q9Y5I2 948 aa18.89■□□□□ 0.61
CLK3-207ENST00000562389 TIMP1P01033 207 aa18.88■□□□□ 0.61
CLK3-207ENST00000562389 PSAPP07602 524 aa18.88■□□□□ 0.61
CLK3-207ENST00000562389 RAG1P15918 1043 aa18.88■□□□□ 0.61
CLK3-207ENST00000562389 ITGB8P26012 769 aa18.88■□□□□ 0.61
CLK3-207ENST00000562389 SFNP31947 248 aa18.88■□□□□ 0.61
CLK3-207ENST00000562389 MAGEA10P43363 369 aaPredicted RBP18.88■□□□□ 0.61
CLK3-207ENST00000562389 SLC26A2P50443 739 aa18.88■□□□□ 0.61
CLK3-207ENST00000562389 STAT5BP51692 787 aa18.88■□□□□ 0.61
CLK3-207ENST00000562389 JAK3P52333 1124 aa18.88■□□□□ 0.61
CLK3-207ENST00000562389 ORC2Q13416 577 aaPredicted RBP18.88■□□□□ 0.61
CLK3-207ENST00000562389 PTGISQ16647 500 aa18.88■□□□□ 0.61
CLK3-207ENST00000562389 FAM160B1Q5W0V3 765 aa18.88■□□□□ 0.61
CLK3-207ENST00000562389 CCDC60Q8IWA6 550 aaPredicted RBP18.88■□□□□ 0.61
CLK3-207ENST00000562389 RDM1Q8NG50 284 aa18.88■□□□□ 0.61
CLK3-207ENST00000562389 HAS1Q92839 578 aa18.88■□□□□ 0.61
CLK3-207ENST00000562389 CTAGE1Q96RT6 745 aa18.88■□□□□ 0.61
CLK3-207ENST00000562389 GDF15Q99988 308 aa18.88■□□□□ 0.61
CLK3-207ENST00000562389 UNC45AQ9H3U1 944 aa18.88■□□□□ 0.61
CLK3-207ENST00000562389 RNPEPQ9H4A4 650 aa18.88■□□□□ 0.61
CLK3-207ENST00000562389 ZNF302Q9NR11 478 aa18.88■□□□□ 0.61
CLK3-207ENST00000562389 TANC1Q9C0D5 1861 aa18.88■□□□□ 0.61
CLK3-207ENST00000562389 C17orf102A2RUQ5 167 aa18.87■□□□□ 0.61
CLK3-207ENST00000562389 BACH1O14867 736 aa18.87■□□□□ 0.61
CLK3-207ENST00000562389 NEMFO60524 1076 aa18.87■□□□□ 0.61
CLK3-207ENST00000562389 PDCP20941 246 aa18.87■□□□□ 0.61
CLK3-207ENST00000562389 MARK3P27448 753 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms