RNA–Protein interactions for RNA: ENST00000562119.5

PDXDC1-207, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-207ENST00000562119 LMBR1Q8WVP7 490 aa23.32■■□□□ 1.32
PDXDC1-207ENST00000562119 ZNF689Q96CS4 500 aaPredicted RBP23.32■■□□□ 1.32
PDXDC1-207ENST00000562119 ZSWIM5Q9P217 1185 aa23.32■■□□□ 1.32
PDXDC1-207ENST00000562119 PCDHA1Q9Y5I3 950 aa23.32■■□□□ 1.32
PDXDC1-207ENST00000562119 TRIM6-TRIM34B2RNG4 842 aa23.31■■□□□ 1.32
PDXDC1-207ENST00000562119 TICAM2Q86XR7 235 aa23.31■■□□□ 1.32
PDXDC1-207ENST00000562119 GPR20Q99678 358 aa23.31■■□□□ 1.32
PDXDC1-207ENST00000562119 EHMT1Q9H9B1 1298 aa23.31■■□□□ 1.32
PDXDC1-207ENST00000562119 CLEC1BQ9P126 229 aa23.31■■□□□ 1.32
PDXDC1-207ENST00000562119 PLAGL2Q9UPG8 496 aa23.31■■□□□ 1.32
PDXDC1-207ENST00000562119 MYH6P13533 1939 aa23.3■■□□□ 1.32
PDXDC1-207ENST00000562119 ENPP3O14638 875 aa23.3■■□□□ 1.32
PDXDC1-207ENST00000562119 ZBTB5O15062 677 aa23.3■■□□□ 1.32
PDXDC1-207ENST00000562119 DNAJB1P25685 340 aa23.3■■□□□ 1.32
PDXDC1-207ENST00000562119 NDUFV1P49821 464 aa23.3■■□□□ 1.32
PDXDC1-207ENST00000562119 MRPS9P82933 396 aaKnown RBP23.3■■□□□ 1.32
PDXDC1-207ENST00000562119 ZXDAP98168 799 aa23.3■■□□□ 1.32
PDXDC1-207ENST00000562119 ARHGAP4P98171 946 aa23.3■■□□□ 1.32
PDXDC1-207ENST00000562119 BTG3Q14201 252 aaPredicted RBP23.3■■□□□ 1.32
PDXDC1-207ENST00000562119 CYFIP1Q7L576 1253 aa23.3■■□□□ 1.32
PDXDC1-207ENST00000562119 ADGRD2Q7Z7M1 963 aa23.3■■□□□ 1.32
PDXDC1-207ENST00000562119 LOC730098B7Z3J9 87 aa23.29■■□□□ 1.32
PDXDC1-207ENST00000562119 NT5C2P49902 561 aa23.29■■□□□ 1.32
PDXDC1-207ENST00000562119 SEMA3FQ13275 785 aa23.29■■□□□ 1.32
PDXDC1-207ENST00000562119 LPIN1Q14693 890 aa23.29■■□□□ 1.32
PDXDC1-207ENST00000562119 SLC35G1Q2M3R5 365 aa23.29■■□□□ 1.32
PDXDC1-207ENST00000562119 METTL7BQ6UX53 244 aa23.29■■□□□ 1.32
PDXDC1-207ENST00000562119 RUFY4Q6ZNE9 571 aa23.29■■□□□ 1.32
PDXDC1-207ENST00000562119 FCHSD1Q86WN1 690 aa23.29■■□□□ 1.32
PDXDC1-207ENST00000562119 SAMD3Q8N6K7 520 aa23.29■■□□□ 1.32
PDXDC1-207ENST00000562119 SMRP1Q8NCR6 262 aa23.29■■□□□ 1.32
PDXDC1-207ENST00000562119 PLVAPQ9BX97 442 aa23.29■■□□□ 1.32
PDXDC1-207ENST00000562119 ZDBF2Q9HCK1 2354 aa23.29■■□□□ 1.32
PDXDC1-207ENST00000562119 ZFHX2Q9C0A1 2572 aaPredicted RBP23.28■■□□□ 1.32
PDXDC1-207ENST00000562119 SPATA31C2B4DYI2 1134 aa23.28■■□□□ 1.32
PDXDC1-207ENST00000562119 KLRF2D3W0D1 207 aa23.28■■□□□ 1.32
PDXDC1-207ENST00000562119 GCOM1H8Y6P7 765 aaPredicted RBP23.28■■□□□ 1.32
PDXDC1-207ENST00000562119 DGKIO75912 1065 aa23.28■■□□□ 1.32
PDXDC1-207ENST00000562119 POLR2MP0CAP2 368 aa23.28■■□□□ 1.32
PDXDC1-207ENST00000562119 ICAM3P32942 547 aa23.28■■□□□ 1.32
PDXDC1-207ENST00000562119 RRP1P56182 461 aaKnown RBP23.28■■□□□ 1.32
PDXDC1-207ENST00000562119 MGAT3Q09327 533 aa23.28■■□□□ 1.32
PDXDC1-207ENST00000562119 PKN1Q16512 942 aa23.28■■□□□ 1.32
PDXDC1-207ENST00000562119 UTP14CQ5TAP6 766 aaKnown RBP23.28■■□□□ 1.32
PDXDC1-207ENST00000562119 INPP4AQ96PE3 977 aaPredicted RBP23.28■■□□□ 1.32
PDXDC1-207ENST00000562119 MAD2L2Q9UI95 211 aa23.28■■□□□ 1.32
PDXDC1-207ENST00000562119 ITGB1P05556 798 aa23.27■■□□□ 1.32
PDXDC1-207ENST00000562119 NEDD9Q14511 834 aa23.27■■□□□ 1.32
PDXDC1-207ENST00000562119 CBX2Q14781 532 aaPredicted RBP23.27■■□□□ 1.32
PDXDC1-207ENST00000562119 SUGP1Q8IWZ8 645 aaKnown RBP23.27■■□□□ 1.32
PDXDC1-207ENST00000562119 FBXL6Q8N531 539 aa23.27■■□□□ 1.32
PDXDC1-207ENST00000562119 EFHBQ8N7U6 833 aa23.27■■□□□ 1.32
PDXDC1-207ENST00000562119 PRRX2Q99811 253 aa23.27■■□□□ 1.32
PDXDC1-207ENST00000562119 FAM86C1Q9NVL1 165 aa23.27■■□□□ 1.32
PDXDC1-207ENST00000562119 ZNF215Q9UL58 517 aaPredicted RBP23.27■■□□□ 1.32
PDXDC1-207ENST00000562119 MRPL42Q9Y6G3 142 aaKnown RBP23.27■■□□□ 1.32
PDXDC1-207ENST00000562119 MYO15AQ9UKN7 3530 aa23.27■■□□□ 1.32
PDXDC1-207ENST00000562119 COASYQ13057 564 aa23.26■■□□□ 1.31
PDXDC1-207ENST00000562119 GNPTABQ3T906 1256 aa23.26■■□□□ 1.31
PDXDC1-207ENST00000562119 SPPL3Q8TCT6 385 aa23.26■■□□□ 1.31
PDXDC1-207ENST00000562119 LINC01599Q8WXQ3 324 aa23.26■■□□□ 1.31
PDXDC1-207ENST00000562119 P2RX5Q93086 422 aa23.26■■□□□ 1.31
PDXDC1-207ENST00000562119 RTEL1Q9NZ71 1219 aa23.26■■□□□ 1.31
PDXDC1-207ENST00000562119 ZBTB47Q9UFB7 747 aaPredicted RBP23.26■■□□□ 1.31
PDXDC1-207ENST00000562119 NRCAMQ92823 1304 aa23.26■■□□□ 1.31
PDXDC1-207ENST00000562119 GLP2RO95838 553 aa23.25■■□□□ 1.31
PDXDC1-207ENST00000562119 MFAP1P55081 439 aaKnown RBP23.25■■□□□ 1.31
PDXDC1-207ENST00000562119 HOMER1Q86YM7 354 aa23.25■■□□□ 1.31
PDXDC1-207ENST00000562119 CRIPAKQ8N1N5 446 aa23.25■■□□□ 1.31
PDXDC1-207ENST00000562119 RILPL2Q969X0 211 aa23.25■■□□□ 1.31
PDXDC1-207ENST00000562119 BARX2Q9UMQ3 279 aaPredicted RBP23.25■■□□□ 1.31
PDXDC1-207ENST00000562119 USP15Q9Y4E8 981 aaPredicted RBP23.25■■□□□ 1.31
PDXDC1-207ENST00000562119 FRMPD4Q14CM0 1322 aa23.25■■□□□ 1.31
PDXDC1-207ENST00000562119 LAMA4Q16363 1823 aa23.24■■□□□ 1.31
PDXDC1-207ENST00000562119 PALM3A6NDB9 673 aaPredicted RBP23.24■■□□□ 1.31
PDXDC1-207ENST00000562119 GFRA3O60609 400 aa23.24■■□□□ 1.31
PDXDC1-207ENST00000562119 SDSP20132 328 aa23.24■■□□□ 1.31
PDXDC1-207ENST00000562119 VCPP55072 806 aaKnown RBP23.24■■□□□ 1.31
PDXDC1-207ENST00000562119 SP4Q02446 784 aa23.24■■□□□ 1.31
PDXDC1-207ENST00000562119 FBXO47Q5MNV8 452 aa23.24■■□□□ 1.31
PDXDC1-207ENST00000562119 IFIT1BQ5T764 474 aaKnown RBP23.24■■□□□ 1.31
PDXDC1-207ENST00000562119 TAF2Q6P1X5 1199 aa23.24■■□□□ 1.31
PDXDC1-207ENST00000562119 PIGSQ96S52 555 aa23.24■■□□□ 1.31
PDXDC1-207ENST00000562119 PCDHGC5Q9Y5F6 944 aa23.24■■□□□ 1.31
PDXDC1-207ENST00000562119 CACNA1HO95180 2353 aa23.24■■□□□ 1.31
PDXDC1-207ENST00000562119 KMT2EQ8IZD2 1858 aa23.24■■□□□ 1.31
PDXDC1-207ENST00000562119 TTC3P53804 2025 aa23.23■■□□□ 1.31
PDXDC1-207ENST00000562119 FIBPO43427 364 aa23.23■■□□□ 1.31
PDXDC1-207ENST00000562119 STAM2O75886 525 aa23.23■■□□□ 1.31
PDXDC1-207ENST00000562119 NRIP1P48552 1158 aa23.23■■□□□ 1.31
PDXDC1-207ENST00000562119 RBM23Q86U06 439 aaKnown RBP23.23■■□□□ 1.31
PDXDC1-207ENST00000562119 RTN4RL1Q86UN2 441 aaPredicted RBP23.23■■□□□ 1.31
PDXDC1-207ENST00000562119 KLHL23Q8NBE8 558 aa23.23■■□□□ 1.31
PDXDC1-207ENST00000562119 PPP2R3CQ969Q6 453 aa23.23■■□□□ 1.31
PDXDC1-207ENST00000562119 ASIC4Q96FT7 647 aa23.23■■□□□ 1.31
PDXDC1-207ENST00000562119 UBAC1Q9BSL1 405 aa23.23■■□□□ 1.31
PDXDC1-207ENST00000562119 AGO3Q9H9G7 860 aaKnown RBP23.23■■□□□ 1.31
PDXDC1-207ENST00000562119 SIGLEC14Q08ET2 396 aa23.22■■□□□ 1.31
PDXDC1-207ENST00000562119 SEC23AQ15436 765 aa23.22■■□□□ 1.31
PDXDC1-207ENST00000562119 NAALADL2Q58DX5 795 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms