RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 TGFB3P10600 412 aa9.47□□□□□ -0.89
GINS3-204ENST00000561952 MARK3P27448 753 aa9.47□□□□□ -0.89
GINS3-204ENST00000561952 NAPAP54920 295 aa9.47□□□□□ -0.89
GINS3-204ENST00000561952 WDR5P61964 334 aaKnown RBP9.47□□□□□ -0.89
GINS3-204ENST00000561952 DEFB103AP81534 67 aa9.47□□□□□ -0.89
GINS3-204ENST00000561952 PTK7Q13308 1070 aa9.47□□□□□ -0.89
GINS3-204ENST00000561952 NEDD9Q14511 834 aa9.47□□□□□ -0.89
GINS3-204ENST00000561952 PCNX4Q63HM2 1172 aa9.47□□□□□ -0.89
GINS3-204ENST00000561952 WWC2Q6AWC2 1192 aa9.47□□□□□ -0.89
GINS3-204ENST00000561952 METTL7BQ6UX53 244 aa9.47□□□□□ -0.89
GINS3-204ENST00000561952 SPRED2Q7Z698 418 aa9.47□□□□□ -0.89
GINS3-204ENST00000561952 NLRX1Q86UT6 975 aa9.47□□□□□ -0.89
GINS3-204ENST00000561952 SGMS1Q86VZ5 419 aa9.47□□□□□ -0.89
GINS3-204ENST00000561952 ARNTL2Q8WYA1 636 aa9.47□□□□□ -0.89
GINS3-204ENST00000561952 ATP6V0A1Q93050 837 aa9.47□□□□□ -0.89
GINS3-204ENST00000561952 JAKMIP1Q96N16 626 aaKnown RBP9.47□□□□□ -0.89
GINS3-204ENST00000561952 INPP4AQ96PE3 977 aaPredicted RBP9.47□□□□□ -0.89
GINS3-204ENST00000561952 SLC9A7Q96T83 725 aa9.47□□□□□ -0.89
GINS3-204ENST00000561952 GPR20Q99678 358 aa9.47□□□□□ -0.89
GINS3-204ENST00000561952 MTA3Q9BTC8 594 aa9.47□□□□□ -0.89
GINS3-204ENST00000561952 TUT1Q9H6E5 874 aaKnown RBP9.47□□□□□ -0.89
GINS3-204ENST00000561952 PCDHA11Q9Y5I1 949 aa9.47□□□□□ -0.89
GINS3-204ENST00000561952 CUL9Q8IWT3 2517 aa9.47□□□□□ -0.89
GINS3-204ENST00000561952 LCHNA4D1U4 455 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 PIK3CDO00329 1044 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 TLL1O43897 1013 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 ATP9AO75110 1047 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 STAM2O75886 525 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 HOXD8P13378 290 aaPredicted RBP9.46□□□□□ -0.9
GINS3-204ENST00000561952 SMARCA1P28370 1054 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 ICAM3P32942 547 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 ARHGAP4P98171 946 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 APOBRQ0VD83 1088 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 MBTPS1Q14703 1052 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 GPNMBQ14956 572 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 SKIV2LQ15477 1246 aaKnown RBP9.46□□□□□ -0.9
GINS3-204ENST00000561952 TRIM71Q2Q1W2 868 aaKnown RBP9.46□□□□□ -0.9
GINS3-204ENST00000561952 TYW1BQ6NUM6 668 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 CNKSR3Q6P9H4 555 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 Q6ZUG5 572 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 DHX32Q7L7V1 743 aaKnown RBP9.46□□□□□ -0.9
GINS3-204ENST00000561952 HERC6Q8IVU3 1022 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 UIMC1Q96RL1 719 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 ZBED2Q9BTP6 218 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 KRTAP3-3Q9BYR6 98 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 KRTAP3-2Q9BYR7 98 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 SETD4Q9NVD3 440 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 RBM28Q9NW13 759 aaKnown RBP9.46□□□□□ -0.9
GINS3-204ENST00000561952 MTUS1Q9ULD2 1270 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 PCDHA6Q9UN73 950 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 PCDHA8Q9Y5H6 950 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 SIP14410 1827 aa9.46□□□□□ -0.9
GINS3-204ENST00000561952 LOXHD1Q8IVV2 1947 aa9.45□□□□□ -0.9
GINS3-204ENST00000561952 TCF20Q9UGU0 1960 aaKnown RBP9.45□□□□□ -0.9
GINS3-204ENST00000561952 EPOPA6NHQ4 379 aa9.45□□□□□ -0.9
GINS3-204ENST00000561952 RSPH10B2B2RC85 870 aa9.45□□□□□ -0.9
GINS3-204ENST00000561952 KIF28PB7ZC32 967 aa9.45□□□□□ -0.9
GINS3-204ENST00000561952 BAIAP3O94812 1187 aa9.45□□□□□ -0.9
GINS3-204ENST00000561952 RSPH10BP0C881 870 aa9.45□□□□□ -0.9
GINS3-204ENST00000561952 ITGB5P18084 799 aa9.45□□□□□ -0.9
GINS3-204ENST00000561952 CDC27P30260 824 aa9.45□□□□□ -0.9
GINS3-204ENST00000561952 TCF7P36402 384 aaPredicted RBP9.45□□□□□ -0.9
GINS3-204ENST00000561952 METAP2P50579 478 aaKnown RBP eCLIP9.45□□□□□ -0.9
GINS3-204ENST00000561952 ADCY7P51828 1080 aa9.45□□□□□ -0.9
GINS3-204ENST00000561952 IGBP1P78318 339 aa9.45□□□□□ -0.9
GINS3-204ENST00000561952 EXOSC10Q01780 885 aaKnown RBP9.45□□□□□ -0.9
GINS3-204ENST00000561952 MTMR1Q13613 665 aa9.45□□□□□ -0.9
GINS3-204ENST00000561952 KRT32Q14532 448 aa9.45□□□□□ -0.9
GINS3-204ENST00000561952 KRT40Q6A162 431 aa9.45□□□□□ -0.9
GINS3-204ENST00000561952 USP26Q9BXU7 913 aa9.45□□□□□ -0.9
GINS3-204ENST00000561952 OSBPL7Q9BZF2 842 aa9.45□□□□□ -0.9
GINS3-204ENST00000561952 RNPEPQ9H4A4 650 aa9.45□□□□□ -0.9
GINS3-204ENST00000561952 TMEM260Q9NX78 707 aa9.45□□□□□ -0.9
GINS3-204ENST00000561952 ZNF215Q9UL58 517 aaPredicted RBP9.45□□□□□ -0.9
GINS3-204ENST00000561952 V9GY48 417 aaPredicted RBP9.45□□□□□ -0.9
GINS3-204ENST00000561952 PRRC2BQ5JSZ5 2229 aaKnown RBP9.45□□□□□ -0.9
GINS3-204ENST00000561952 MUC3AQ02505 3323 aa9.44□□□□□ -0.9
GINS3-204ENST00000561952 SMCO2A6NFE2 343 aa9.44□□□□□ -0.9
GINS3-204ENST00000561952 DDX39AO00148 427 aaKnown RBP9.44□□□□□ -0.9
GINS3-204ENST00000561952 STXBP3O00186 592 aa9.44□□□□□ -0.9
GINS3-204ENST00000561952 LGR5O75473 907 aa9.44□□□□□ -0.9
GINS3-204ENST00000561952 CXCL10P02778 98 aa9.44□□□□□ -0.9
GINS3-204ENST00000561952 KCNA2P16389 499 aa9.44□□□□□ -0.9
GINS3-204ENST00000561952 TAP1Q03518 808 aa9.44□□□□□ -0.9
GINS3-204ENST00000561952 GSE1Q14687 1217 aa9.44□□□□□ -0.9
GINS3-204ENST00000561952 TRAF7Q6Q0C0 670 aa9.44□□□□□ -0.9
GINS3-204ENST00000561952 BLOC1S2Q6QNY1 142 aa9.44□□□□□ -0.9
GINS3-204ENST00000561952 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.44□□□□□ -0.9
GINS3-204ENST00000561952 SERINC5Q86VE9 423 aa9.44□□□□□ -0.9
GINS3-204ENST00000561952 MYOCDQ8IZQ8 938 aa9.44□□□□□ -0.9
GINS3-204ENST00000561952 DBF4BQ8NFT6 615 aa9.44□□□□□ -0.9
GINS3-204ENST00000561952 CYP2W1Q8TAV3 490 aa9.44□□□□□ -0.9
GINS3-204ENST00000561952 LMBR1Q8WVP7 490 aa9.44□□□□□ -0.9
GINS3-204ENST00000561952 GLG1Q92896 1179 aa9.44□□□□□ -0.9
GINS3-204ENST00000561952 BRF1Q92994 677 aa9.44□□□□□ -0.9
GINS3-204ENST00000561952 GPRASP2Q96D09 838 aa9.44□□□□□ -0.9
GINS3-204ENST00000561952 ZBTB10Q96DT7 871 aa9.44□□□□□ -0.9
GINS3-204ENST00000561952 ANO3Q9BYT9 981 aa9.44□□□□□ -0.9
GINS3-204ENST00000561952 EHMT1Q9H9B1 1298 aa9.44□□□□□ -0.9
GINS3-204ENST00000561952 SNX14Q9Y5W7 946 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms