RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 GPBP1Q86WP2 473 aa12.08□□□□□ -0.47
NEIL1-202ENST00000561643 SP8Q8IXZ3 490 aa12.08□□□□□ -0.47
NEIL1-202ENST00000561643 CRACR2AQ9BSW2 395 aa12.08□□□□□ -0.47
NEIL1-202ENST00000561643 POTEB3A0JP26 581 aa12.08□□□□□ -0.48
NEIL1-202ENST00000561643 POTECB2RU33 542 aa12.08□□□□□ -0.48
NEIL1-202ENST00000561643 PLA2G4BP0C869 781 aa12.08□□□□□ -0.48
NEIL1-202ENST00000561643 SCP2P22307 547 aa12.08□□□□□ -0.48
NEIL1-202ENST00000561643 CXCR5P32302 372 aa12.08□□□□□ -0.48
NEIL1-202ENST00000561643 RASSF7Q02833 373 aa12.08□□□□□ -0.48
NEIL1-202ENST00000561643 KCNMA1Q12791 1236 aa12.08□□□□□ -0.48
NEIL1-202ENST00000561643 TTC19Q6DKK2 380 aaPredicted RBP12.08□□□□□ -0.48
NEIL1-202ENST00000561643 CDC42EP5Q6NZY7 148 aa12.08□□□□□ -0.48
NEIL1-202ENST00000561643 NFRKBQ6P4R8 1299 aa12.08□□□□□ -0.48
NEIL1-202ENST00000561643 POTEBQ6S5H4 581 aa12.08□□□□□ -0.48
NEIL1-202ENST00000561643 OSBPL9Q96SU4 736 aa12.08□□□□□ -0.48
NEIL1-202ENST00000561643 NAP1L4Q99733 375 aaKnown RBP12.08□□□□□ -0.48
NEIL1-202ENST00000561643 LSM14BQ9BX40 385 aaKnown RBP12.08□□□□□ -0.48
NEIL1-202ENST00000561643 HPCAL4Q9UM19 191 aa12.08□□□□□ -0.48
NEIL1-202ENST00000561643 HYOU1Q9Y4L1 999 aa12.08□□□□□ -0.48
NEIL1-202ENST00000561643 TCP1P17987 556 aaKnown RBP12.08□□□□□ -0.48
NEIL1-202ENST00000561643 SLC9C1Q4G0N8 1177 aa12.08□□□□□ -0.48
NEIL1-202ENST00000561643 ZCWPW2Q504Y3 356 aa12.08□□□□□ -0.48
NEIL1-202ENST00000561643 POTEAQ6S8J7 498 aa12.08□□□□□ -0.48
NEIL1-202ENST00000561643 KRT27Q7Z3Y8 459 aa12.08□□□□□ -0.48
NEIL1-202ENST00000561643 TMC4Q7Z404 712 aa12.08□□□□□ -0.48
NEIL1-202ENST00000561643 FGFBP2Q9BYJ0 223 aa12.08□□□□□ -0.48
NEIL1-202ENST00000561643 EDEM3Q9BZQ6 932 aa12.08□□□□□ -0.48
NEIL1-202ENST00000561643 PCDHA1Q9Y5I3 950 aa12.08□□□□□ -0.48
NEIL1-202ENST00000561643 MYO3BQ8WXR4 1341 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 NPHP3-ACAD11A0A0J9YXS1 232 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 BUB1O43683 1085 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 MYBL2P10244 700 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 SLC1A4P43007 532 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 QRICH1Q2TAL8 776 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 SFMBT2Q5VUG0 894 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 LRCH2Q5VUJ6 765 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 FOXR2Q6PJQ5 311 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 CCNI2Q6ZMN8 369 aaPredicted RBP12.07□□□□□ -0.48
NEIL1-202ENST00000561643 RPAINQ86UA6 219 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 TEKT1Q969V4 418 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 NOX5Q96PH1 765 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 SELENOOQ9BVL4 669 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 KANSL2Q9H9L4 492 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 CEP72Q9P209 647 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.07□□□□□ -0.48
NEIL1-202ENST00000561643 SSU72P8A0A1W2PR75 194 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 POLRMTO00411 1230 aaKnown RBP12.07□□□□□ -0.48
NEIL1-202ENST00000561643 NCK2O43639 380 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 EPS15P42566 896 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 POLR2FP61218 127 aaKnown RBP12.07□□□□□ -0.48
NEIL1-202ENST00000561643 NFIAQ12857 509 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 FAM83BQ5T0W9 1011 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 SPATA4Q8NEY3 305 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 CEP63Q96MT8 703 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 JPH2Q9BR39 696 aaPredicted RBP12.07□□□□□ -0.48
NEIL1-202ENST00000561643 EHD4Q9H223 541 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 ATP6V0A2Q9Y487 856 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 FAM169AQ9Y6X4 670 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 THSD7AQ9UPZ6 1657 aa12.07□□□□□ -0.48
NEIL1-202ENST00000561643 PRLRP16471 622 aa12.06□□□□□ -0.48
NEIL1-202ENST00000561643 STAT3P40763 770 aa12.06□□□□□ -0.48
NEIL1-202ENST00000561643 PAFAH1B1P43034 410 aa12.06□□□□□ -0.48
NEIL1-202ENST00000561643 MMGT1Q8N4V1 131 aa12.06□□□□□ -0.48
NEIL1-202ENST00000561643 ANO3Q9BYT9 981 aa12.06□□□□□ -0.48
NEIL1-202ENST00000561643 GLT8D2Q9H1C3 349 aa12.06□□□□□ -0.48
NEIL1-202ENST00000561643 NUCKS1Q9H1E3 243 aaKnown RBP12.06□□□□□ -0.48
NEIL1-202ENST00000561643 SALL4Q9UJQ4 1053 aa12.06□□□□□ -0.48
NEIL1-202ENST00000561643 ATF5Q9Y2D1 282 aaPredicted RBP12.06□□□□□ -0.48
NEIL1-202ENST00000561643 FAM196BA6NMK8 535 aa12.06□□□□□ -0.48
NEIL1-202ENST00000561643 GNA14O95837 355 aa12.06□□□□□ -0.48
NEIL1-202ENST00000561643 AARSP49588 968 aaKnown RBP eCLIP12.06□□□□□ -0.48
NEIL1-202ENST00000561643 MRPS25P82663 173 aaKnown RBP12.06□□□□□ -0.48
NEIL1-202ENST00000561643 MAP2K1Q02750 393 aaPredicted RBP12.06□□□□□ -0.48
NEIL1-202ENST00000561643 ARID5AQ03989 594 aa12.06□□□□□ -0.48
NEIL1-202ENST00000561643 EZH2Q15910 746 aaKnown RBP12.06□□□□□ -0.48
NEIL1-202ENST00000561643 ENOX2Q16206 610 aaKnown RBP12.06□□□□□ -0.48
NEIL1-202ENST00000561643 HYIQ5T013 277 aa12.06□□□□□ -0.48
NEIL1-202ENST00000561643 HGSNATQ68CP4 663 aa12.06□□□□□ -0.48
NEIL1-202ENST00000561643 MTMR8Q96EF0 704 aa12.06□□□□□ -0.48
NEIL1-202ENST00000561643 LRRC1Q9BTT6 524 aa12.06□□□□□ -0.48
NEIL1-202ENST00000561643 LUC7LQ9NQ29 371 aaKnown RBP12.06□□□□□ -0.48
NEIL1-202ENST00000561643 EMILIN3Q9NT22 766 aa12.06□□□□□ -0.48
NEIL1-202ENST00000561643 SMARCAL1Q9NZC9 954 aa12.06□□□□□ -0.48
NEIL1-202ENST00000561643 PJA2O43164 708 aa12.06□□□□□ -0.48
NEIL1-202ENST00000561643 KIF1CO43896 1103 aaKnown RBP12.06□□□□□ -0.48
NEIL1-202ENST00000561643 SYF2O95926 243 aaKnown RBP12.06□□□□□ -0.48
NEIL1-202ENST00000561643 SERPING1P05155 500 aa12.06□□□□□ -0.48
NEIL1-202ENST00000561643 TCP10Q12799 353 aa12.06□□□□□ -0.48
NEIL1-202ENST00000561643 RAPGEF1Q13905 1077 aa12.06□□□□□ -0.48
NEIL1-202ENST00000561643 ASTE1Q2TB18 679 aaPredicted RBP12.06□□□□□ -0.48
NEIL1-202ENST00000561643 CCDC17Q96LX7 622 aa12.06□□□□□ -0.48
NEIL1-202ENST00000561643 CYP11B2P19099 503 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 ADAM9Q13443 819 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 CDC37Q16543 378 aaPredicted RBP12.05□□□□□ -0.48
NEIL1-202ENST00000561643 ZNF772Q68DY9 489 aaPredicted RBP12.05□□□□□ -0.48
NEIL1-202ENST00000561643 APOBEC3HQ6NTF7 200 aaKnown RBP12.05□□□□□ -0.48
NEIL1-202ENST00000561643 HDAC7Q8WUI4 952 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 SCFD1Q8WVM8 642 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.05□□□□□ -0.48
NEIL1-202ENST00000561643 EHD2Q9NZN4 543 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms