RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 DEXIO95424 95 aa23.56■■□□□ 1.36
TPM1-232ENST00000561425 CXCL10P02778 98 aa23.56■■□□□ 1.36
TPM1-232ENST00000561425 CIITAP33076 1130 aa23.56■■□□□ 1.36
TPM1-232ENST00000561425 SCRN1Q12765 414 aa23.56■■□□□ 1.36
TPM1-232ENST00000561425 ITGB3BPQ13352 177 aaPredicted RBP23.56■■□□□ 1.36
TPM1-232ENST00000561425 ZNF697Q5TEC3 545 aa23.56■■□□□ 1.36
TPM1-232ENST00000561425 LRRC8DQ7L1W4 858 aa23.56■■□□□ 1.36
TPM1-232ENST00000561425 BICD2Q8TD16 824 aa23.56■■□□□ 1.36
TPM1-232ENST00000561425 GUCD1Q96NT3 240 aa23.56■■□□□ 1.36
TPM1-232ENST00000561425 PCYT2Q99447 389 aa23.56■■□□□ 1.36
TPM1-232ENST00000561425 MTIF3Q9H2K0 278 aaKnown RBP23.56■■□□□ 1.36
TPM1-232ENST00000561425 JPH1Q9HDC5 661 aaPredicted RBP23.56■■□□□ 1.36
TPM1-232ENST00000561425 VPS54Q9P1Q0 977 aa23.56■■□□□ 1.36
TPM1-232ENST00000561425 ZNF215Q9UL58 517 aaPredicted RBP23.56■■□□□ 1.36
TPM1-232ENST00000561425 DHX15O43143 795 aaKnown RBP23.55■■□□□ 1.36
TPM1-232ENST00000561425 UTP14CQ5TAP6 766 aaKnown RBP23.55■■□□□ 1.36
TPM1-232ENST00000561425 DEFB128Q7Z7B8 93 aa23.55■■□□□ 1.36
TPM1-232ENST00000561425 SLC9A2Q9UBY0 812 aa23.55■■□□□ 1.36
TPM1-232ENST00000561425 STXBP5LQ9Y2K9 1186 aa23.55■■□□□ 1.36
TPM1-232ENST00000561425 EMSYQ7Z589 1322 aa23.55■■□□□ 1.36
TPM1-232ENST00000561425 LAMA2P24043 3122 aaKnown RBP23.55■■□□□ 1.36
TPM1-232ENST00000561425 GRXCR1A8MXD5 290 aa23.54■■□□□ 1.36
TPM1-232ENST00000561425 M0R2N6 131 aa23.54■■□□□ 1.36
TPM1-232ENST00000561425 CPLX1O14810 134 aa23.54■■□□□ 1.36
TPM1-232ENST00000561425 AK2P54819 239 aa23.54■■□□□ 1.36
TPM1-232ENST00000561425 SP4Q02446 784 aa23.54■■□□□ 1.36
TPM1-232ENST00000561425 STK3Q13188 491 aa23.54■■□□□ 1.36
TPM1-232ENST00000561425 ANKRD1Q15327 319 aa23.54■■□□□ 1.36
TPM1-232ENST00000561425 NPY5RQ15761 445 aa23.54■■□□□ 1.36
TPM1-232ENST00000561425 CPLX2Q6PUV4 134 aaKnown RBP23.54■■□□□ 1.36
TPM1-232ENST00000561425 ATP6V0A1Q93050 837 aa23.54■■□□□ 1.36
TPM1-232ENST00000561425 PBX4Q9BYU1 374 aa23.54■■□□□ 1.36
TPM1-232ENST00000561425 SMARCAD1Q9H4L7 1026 aa23.54■■□□□ 1.36
TPM1-232ENST00000561425 PKD2L1Q9P0L9 805 aa23.54■■□□□ 1.36
TPM1-232ENST00000561425 NRCAMQ92823 1304 aa23.54■■□□□ 1.36
TPM1-232ENST00000561425 DOCK5Q9H7D0 1870 aa23.53■■□□□ 1.36
TPM1-232ENST00000561425 IGKV6D-21A0A0A0MT36 114 aa23.53■■□□□ 1.36
TPM1-232ENST00000561425 TREHO43280 583 aa23.53■■□□□ 1.36
TPM1-232ENST00000561425 NBNO60934 754 aa23.53■■□□□ 1.36
TPM1-232ENST00000561425 GNAT1P11488 350 aa23.53■■□□□ 1.36
TPM1-232ENST00000561425 DNAJB2P25686 324 aa23.53■■□□□ 1.36
TPM1-232ENST00000561425 ZNF618Q5T7W0 954 aa23.53■■□□□ 1.36
TPM1-232ENST00000561425 DAGLBQ8NCG7 672 aa23.53■■□□□ 1.36
TPM1-232ENST00000561425 RASGRP4Q8TDF6 673 aa23.53■■□□□ 1.36
TPM1-232ENST00000561425 SDF4Q9BRK5 362 aa23.53■■□□□ 1.36
TPM1-232ENST00000561425 SLKQ9H2G2 1235 aaPredicted RBP23.53■■□□□ 1.36
TPM1-232ENST00000561425 SETD4Q9NVD3 440 aa23.53■■□□□ 1.36
TPM1-232ENST00000561425 ERAP1Q9NZ08 941 aa23.53■■□□□ 1.36
TPM1-232ENST00000561425 PCDHA4Q9UN74 947 aa23.53■■□□□ 1.36
TPM1-232ENST00000561425 CAND2O75155 1236 aa23.52■■□□□ 1.36
TPM1-232ENST00000561425 ZNF76P36508 570 aa23.52■■□□□ 1.36
TPM1-232ENST00000561425 USP11P51784 963 aa23.52■■□□□ 1.36
TPM1-232ENST00000561425 ACTR2P61160 394 aa23.52■■□□□ 1.36
TPM1-232ENST00000561425 MBTPS1Q14703 1052 aa23.52■■□□□ 1.36
TPM1-232ENST00000561425 GALNT17Q6IS24 598 aa23.52■■□□□ 1.36
TPM1-232ENST00000561425 PLPPR4Q7Z2D5 763 aa23.52■■□□□ 1.36
TPM1-232ENST00000561425 RPAINQ86UA6 219 aa23.52■■□□□ 1.36
TPM1-232ENST00000561425 PLA2G4DQ86XP0 818 aa23.52■■□□□ 1.36
TPM1-232ENST00000561425 SLC4A7Q9Y6M7 1214 aa23.52■■□□□ 1.36
TPM1-232ENST00000561425 TANC1Q9C0D5 1861 aa23.51■■□□□ 1.35
TPM1-232ENST00000561425 CTDNEP1O95476 244 aa23.51■■□□□ 1.35
TPM1-232ENST00000561425 CCNE2O96020 404 aa23.51■■□□□ 1.35
TPM1-232ENST00000561425 ACTN1P12814 892 aa23.51■■□□□ 1.35
TPM1-232ENST00000561425 PBX2P40425 430 aa23.51■■□□□ 1.35
TPM1-232ENST00000561425 NLRP5P59047 1200 aa23.51■■□□□ 1.35
TPM1-232ENST00000561425 C8orf34Q49A92 452 aa23.51■■□□□ 1.35
TPM1-232ENST00000561425 PHOSPHO2Q8TCD6 241 aa23.51■■□□□ 1.35
TPM1-232ENST00000561425 LMBR1Q8WVP7 490 aa23.51■■□□□ 1.35
TPM1-232ENST00000561425 LENG9Q96B70 501 aa23.51■■□□□ 1.35
TPM1-232ENST00000561425 TIFAQ96CG3 184 aa23.51■■□□□ 1.35
TPM1-232ENST00000561425 AIFM3Q96NN9 605 aa23.51■■□□□ 1.35
TPM1-232ENST00000561425 STK36Q9NRP7 1315 aa23.51■■□□□ 1.35
TPM1-232ENST00000561425 SCN5AQ14524 2016 aa23.5■■□□□ 1.35
TPM1-232ENST00000561425 MBLAC1A4D2B0 266 aaPredicted RBP23.5■■□□□ 1.35
TPM1-232ENST00000561425 CDKL5O76039 1030 aa23.5■■□□□ 1.35
TPM1-232ENST00000561425 BAIAP3O94812 1187 aa23.5■■□□□ 1.35
TPM1-232ENST00000561425 SETQ01105 290 aaPredicted RBP23.5■■□□□ 1.35
TPM1-232ENST00000561425 MARCH8Q5T0T0 291 aa23.5■■□□□ 1.35
TPM1-232ENST00000561425 ABHD15Q6UXT9 468 aa23.5■■□□□ 1.35
TPM1-232ENST00000561425 TRIP12Q14669 1992 aaPredicted RBP23.49■■□□□ 1.35
TPM1-232ENST00000561425 IPO5O00410 1097 aaKnown RBP23.49■■□□□ 1.35
TPM1-232ENST00000561425 RAB30Q15771 203 aa23.49■■□□□ 1.35
TPM1-232ENST00000561425 ME3Q16798 604 aa23.49■■□□□ 1.35
TPM1-232ENST00000561425 FAM26DQ5JW98 314 aa23.49■■□□□ 1.35
TPM1-232ENST00000561425 GLG1Q92896 1179 aa23.49■■□□□ 1.35
TPM1-232ENST00000561425 CDX2Q99626 313 aaPredicted RBP23.49■■□□□ 1.35
TPM1-232ENST00000561425 FTOQ9C0B1 505 aaKnown RBP eCLIP23.49■■□□□ 1.35
TPM1-232ENST00000561425 TBC1D22BQ9NU19 505 aa23.49■■□□□ 1.35
TPM1-232ENST00000561425 RSPH10B2B2RC85 870 aa23.48■■□□□ 1.35
TPM1-232ENST00000561425 RSPH10BP0C881 870 aa23.48■■□□□ 1.35
TPM1-232ENST00000561425 THPOP40225 353 aa23.48■■□□□ 1.35
TPM1-232ENST00000561425 STAT5BP51692 787 aa23.48■■□□□ 1.35
TPM1-232ENST00000561425 MKRN4PQ13434 485 aaPredicted RBP23.48■■□□□ 1.35
TPM1-232ENST00000561425 TCTN1Q2MV58 587 aa23.48■■□□□ 1.35
TPM1-232ENST00000561425 CNKSR3Q6P9H4 555 aa23.48■■□□□ 1.35
TPM1-232ENST00000561425 BLIDQ8IZY5 108 aa23.48■■□□□ 1.35
TPM1-232ENST00000561425 FAM161BQ96MY7 647 aa23.48■■□□□ 1.35
TPM1-232ENST00000561425 PHF20Q9BVI0 1012 aa23.48■■□□□ 1.35
TPM1-232ENST00000561425 C22orf23Q9BZE7 217 aa23.48■■□□□ 1.35
TPM1-232ENST00000561425 ZNF576Q9H609 170 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms